Basic Information

Insect: Euclidia mi
Gene Symbol: -
Assembly: GCA_944738845.2
Location: CALYKX020000438.1:128978-130153[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00031 0.088 15.5 1.0 1 22 169 190 169 193 0.91

2 7 0.068 19 8.1 3.2 1 23 198 219 198 220 0.87

3 7 3.8e-06 0.0011 21.5 2.1 1 23 225 247 225 247 0.98

4 7 0.00021 0.059 16.0 1.9 1 23 253 275 253 275 0.99

5 7 9.4e-08 2.6e-05 26.5 0.7 1 23 281 303 281 303 0.99

6 7 0.0021 0.59 12.9 0.7 1 23 309 332 309 332 0.97

7 7 0.00014 0.038 16.6 1.3 1 23 338 361 338 361 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00031	0.088	15.5	1.0	1	22	169	190	169	193	0.91
2	7	0.068	19	8.1	3.2	1	23	198	219	198	220	0.87
3	7	3.8e-06	0.0011	21.5	2.1	1	23	225	247	225	247	0.98
4	7	0.00021	0.059	16.0	1.9	1	23	253	275	253	275	0.99
5	7	9.4e-08	2.6e-05	26.5	0.7	1	23	281	303	281	303	0.99
6	7	0.0021	0.59	12.9	0.7	1	23	309	332	309	332	0.97
7	7	0.00014	0.038	16.6	1.3	1	23	338	361	338	361	0.95

Sequence Information

Coding Sequence: ATGGTCGGCCCATTGCTGCTGTTAAAAATGTTACATTGTAGACGTATGAATGCGCGAAATAGAAATGCAGGTGAAGAACCAGCTGTTGAGAGACCTTCTCAGTCTGCACCTGAAGAAAAACCACGAGAAACGAAAACTATGAAGAAAGAAAATGAAGAAAGTATTTGTAGAGTATGTCTTAAAGGAGGATCTATCCCTATTTACGGAAACAATGGATCGGAGGATATTTCAGAAGCACTGAACTCGATTGGCAGTATAGACGTTCAAATTGATGATCCATACCCGAAACACTTGTGTGAAACGTGTAACTCGCTATTACAAGGTGCAATATTATTTAGGAAAACAGCTCAAAAATCAGATGAGATACTCAAAAAGCCACCAGAACCCATGGAAGAGGAATTACCAGACTATAATAATGATGATAATGATAATAATGATATAGAGTGCTCAGATGAGGACATACCACTAAAATATATAGAGCAAAAAGCAAAAAAGCTGGATATATACCGTTGCAAAAAGTGCAATGTCTCTTTTAAAACATTTGAAGAACTTGATGAGCACAGAATGTCTGAAGAACATGAAAATATGAGGCATGTGTGTCCATACTGCCACAAGTCATATGCCCCATTATACTACAAAAAGCATTTAGCATATCATACAAAAACTGCTTGTTACATGTGTGATGTATGTGGGAAGAACTTCATAATGCAGGGACATTTTACAAGACATAGGCTAACACATTTCTATAAGCTACCTTTCAAATGTTCCTTATGCCCATACAAAGGAAGGTTTCGGGAATCTTTGAAAATGCATATGCGTTCTCACACTGGAGAGAAGCCATATCAATGTTCTGAATGTCCTGGCCGATTTATAAATAAAAGTAATTTGAACAAACACATGCTAACACATAAAGAGGCACCTGATTTTAAATGTGATGCTTGCGGAAGAAGGTTTTATATGAAACGAGAGGTAGAACTTCATTATAAAGTAGACCATGGTGGTGTAAAAGACCATGTCTGTAAAGTCTGTGGGAAAGCCTTTGGTTATCGGAAGCAAATGATGAAACATGAGCTAAAGGTTCATAAGAGAGCTAAGTTACGAAGTGGAAGAACTCCACTTTATTTGAAAGTTGAGAGTATGCAGCAACAGGGGCAAGATATTGTTACTGAAAGCTGA
Protein Sequence: MVGPLLLLKMLHCRRMNARNRNAGEEPAVERPSQSAPEEKPRETKTMKKENEESICRVCLKGGSIPIYGNNGSEDISEALNSIGSIDVQIDDPYPKHLCETCNSLLQGAILFRKTAQKSDEILKKPPEPMEEELPDYNNDDNDNNDIECSDEDIPLKYIEQKAKKLDIYRCKKCNVSFKTFEELDEHRMSEEHENMRHVCPYCHKSYAPLYYKKHLAYHTKTACYMCDVCGKNFIMQGHFTRHRLTHFYKLPFKCSLCPYKGRFRESLKMHMRSHTGEKPYQCSECPGRFINKSNLNKHMLTHKEAPDFKCDACGRRFYMKREVELHYKVDHGGVKDHVCKVCGKAFGYRKQMMKHELKVHKRAKLRSGRTPLYLKVESMQQQGQDIVTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282776;
90% Identity: -
80% Identity: -