Emi009974.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000088.1:642351-645888[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.003 0.84 12.4 0.3 1 23 232 255 232 255 0.94 2 15 0.00081 0.23 14.2 0.7 2 23 268 290 267 290 0.96 3 15 0.00034 0.094 15.4 1.0 1 23 296 319 296 319 0.93 4 15 0.0003 0.083 15.5 0.4 2 21 323 342 322 343 0.92 5 15 0.004 1.1 12.0 0.7 1 23 351 374 351 374 0.94 6 15 7.9 2.2e+03 1.6 2.0 1 23 379 402 379 402 0.91 7 15 0.0027 0.76 12.5 0.2 2 23 415 436 414 436 0.96 8 15 0.0053 1.5 11.6 2.2 1 23 442 464 442 464 0.97 9 15 0.0067 1.9 11.3 2.0 1 23 500 522 500 522 0.96 10 15 0.02 5.7 9.8 0.1 3 23 528 548 527 548 0.93 11 15 0.00012 0.034 16.7 1.3 2 23 567 589 566 589 0.96 12 15 0.00078 0.22 14.2 2.7 1 23 595 617 595 617 0.98 13 15 0.0015 0.41 13.4 6.0 2 23 624 645 623 645 0.96 14 15 7.3e-06 0.002 20.6 1.5 1 23 651 674 651 674 0.97 15 15 0.39 1.1e+02 5.7 1.4 2 23 680 702 679 702 0.95
Sequence Information
- Coding Sequence
- ATGCAAGTAGAGTCAGCACCAGAAGCAGACCCAGACAAGCTGGACTGGTTGAAACAAAAGCTAAAAGCAATATGGTCATCACCTAAGTTCTGTGGCTTGTGTCTCGAGAGCACAGGAAACTTTAGTTCCGTAGATATGGAACTTATAATTAACAAGCAAAAGTTCACAAGATCCCTACAGGATATTATAAATTATGTTTTTAATGATGATGTTGAATCCCTTATATCAAGTTCACACTTATGTGACGCATGTACTGAAAAAATTATCCAGTCGTACCTCTTCATTCACAATGCTAAACAACTATCAAAAATAATGAACAACTGTGTGAGTGATCTTTATTCCAAAGTTGTTGATGTTAACGAACAAGTAACTTCTTCAGAAAGCTTTGAGAATGCCAATGTTATGATTGTTCTTGAATCTGACACAGACCTGTATCAGACAATTATAGACACAAAAATGACTGAAATCGTACCAACTACTACTCCAATAGCAATGAAGACTGATGAACCGAAACCAGTTGCTGAGAAAGCTGCAGCACTCAAAGTAGAAATACAACCACCAAAAGTAGTTGTAAAACCTATAGAAGTTAAGCCAATTAAAACAGAACCAACGCCCAATATAACTTTAAAAGGAGGACATATTGTCATTAAACCGTTGAGTTCATCAAGGACTTTGACACCCCGTTACAATACATATGAATGTGCGAGTTGCCCTGAGATTTTTACAACATATCGCTCCTTGAAAGAACATGAAAAGGCCAAGCATAATAAAGAGCAAACTCTCAATCATGCTAATAAAGTGAAATGTATGGACTGTGATTATGTGACTCGAAGAAAAGAACATTTGATTGGACATGTGAACAGGGAACATTTGGATCATCATCCCTTTACTTGTGCTGATTGTGGTCAGCAGTTCTACACGAAGTTGAGTTTAAAAACCCATATAGTACAGTTCCATGAAGATTTGAACTGTGAATACTGTGATTTTGTTTTCAAAGACAAAAATACTTTGGAAAATCATAAGAAAGTGTGTAAATCAGTTATAAGGGCATTTAATTGTGATCATTGTGTGGCATCCTTTGATACGGAAGAAGAGCTGACAAATCACGAAAATTTGAGACATAGTGATAGTGTTCACGCTTGTAACCTTTGCAAAAGTAAATTTCTGACTAATCTAGAATTGGAGGAGCATCATGCAAGAGTACATGGTGGCATACAATGCAAGAAGCGAAGGAAGCATATCGAATGTTCTTTGTGCGACTTAATGTTTAAGAATGTGAAAGAGCTACTTCAGCACGAAAAGTTACATGAGCCGGATGAAGTTTATCCATGTAAAGTTTGTTCGAAACAGTTCAAGAGTTTGATGAAGCTGTATATGCATAACCAGAGGCACTACACTAATAGGATAAAGTGTACGCGTTGTAACAAAAAAGTAGCAGCGTCATTTTACGCGCAACATGCGGTCAGATGTCCGTACAATAGGGAAGCAGATCTGTGTCATGTCTGCGAAGTGTGCGGTAAAGCCTTCCACCTTGAATCATTGCTCCGTTTCCATCAGAAAGTCCATTTGGAACGGGAACCGTGTCCACAGTGCGACAAAGTTATGAAGCCAGCAAGCTTAAAACGACACATGGAACTTATTCATGGTGATTCATCAGACAAGCAAAAGAAGAAAATTGGAGTGAAGCAACCGTCAATAGAATGTCAGATATGTGGACATGCTGTTAGAAAGAAACATGATTTAGAAGCACATATGAACAGATACCACTTAAAAATCAAGCCATACGTCTGTCATATATGCAGCAAAGATTTTTGTGGGAAAATTCGTTTGAAAGAGCATATAGCCACCCATACAACAGACAATAGTTGTTTCTGTTCAGTCTGTGGCAAGAAGTTTGCTAACCGTGTGTGTCTAAAAATGCATTTCAGAATGCATACAGGGGAACTACCGTACCCTTGCGATATTTGTGGACGAAAATTCAGATCTTCAAGCATGATGAAGACTCATCGGTTGAAGAGACATTTAAATAAGACCGTTACTTGCCCACTCTGTGACAGTATGTTCTATATGGTGCGTGATATGAGGCATCACTTTAAGAAAGTGCATTGGAAGTTCAAAGATAGGCCGTTTAACGTAAGAGAAGTTGCAGAACTAGGACCAGAGTTTTATCATCTCTTTGAGGATAGGAGAATGCCTAAACTGGATGCCGAACAAGATATTACTTTGGAATCTATTGAAATAGTTGAAGCACCTCAGGAATAA
- Protein Sequence
- MQVESAPEADPDKLDWLKQKLKAIWSSPKFCGLCLESTGNFSSVDMELIINKQKFTRSLQDIINYVFNDDVESLISSSHLCDACTEKIIQSYLFIHNAKQLSKIMNNCVSDLYSKVVDVNEQVTSSESFENANVMIVLESDTDLYQTIIDTKMTEIVPTTTPIAMKTDEPKPVAEKAAALKVEIQPPKVVVKPIEVKPIKTEPTPNITLKGGHIVIKPLSSSRTLTPRYNTYECASCPEIFTTYRSLKEHEKAKHNKEQTLNHANKVKCMDCDYVTRRKEHLIGHVNREHLDHHPFTCADCGQQFYTKLSLKTHIVQFHEDLNCEYCDFVFKDKNTLENHKKVCKSVIRAFNCDHCVASFDTEEELTNHENLRHSDSVHACNLCKSKFLTNLELEEHHARVHGGIQCKKRRKHIECSLCDLMFKNVKELLQHEKLHEPDEVYPCKVCSKQFKSLMKLYMHNQRHYTNRIKCTRCNKKVAASFYAQHAVRCPYNREADLCHVCEVCGKAFHLESLLRFHQKVHLEREPCPQCDKVMKPASLKRHMELIHGDSSDKQKKKIGVKQPSIECQICGHAVRKKHDLEAHMNRYHLKIKPYVCHICSKDFCGKIRLKEHIATHTTDNSCFCSVCGKKFANRVCLKMHFRMHTGELPYPCDICGRKFRSSSMMKTHRLKRHLNKTVTCPLCDSMFYMVRDMRHHFKKVHWKFKDRPFNVREVAELGPEFYHLFEDRRMPKLDAEQDITLESIEIVEAPQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -