Basic Information

Insect: Euclidia mi
Gene Symbol: -
Assembly: GCA_944738845.2
Location: CALYKX020000007.1:560117-566723[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.3 83 6.1 0.4 5 21 218 234 216 235 0.93

2 12 0.00056 0.16 14.7 3.2 2 23 252 273 251 274 0.95

3 12 0.00024 0.066 15.8 2.3 1 23 287 309 287 309 0.98

4 12 1.5e-05 0.0042 19.6 2.1 1 23 317 340 317 340 0.97

5 12 0.00068 0.19 14.4 1.0 1 23 346 368 346 368 0.97

6 12 0.00042 0.12 15.1 5.9 1 23 374 396 374 396 0.98

7 12 1.2e-07 3.3e-05 26.2 1.3 1 23 402 424 402 424 0.96

8 12 3.7e-06 0.001 21.5 0.8 1 23 430 452 430 452 0.98

9 12 1.2e-06 0.00034 23.1 0.2 1 23 458 480 458 480 0.98

10 12 0.00016 0.044 16.4 1.4 1 23 486 508 486 508 0.98

11 12 3.5e-05 0.0097 18.5 2.2 1 21 514 534 514 536 0.96

12 12 1.6e-06 0.00045 22.7 0.7 1 23 542 564 542 564 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.3	83	6.1	0.4	5	21	218	234	216	235	0.93
2	12	0.00056	0.16	14.7	3.2	2	23	252	273	251	274	0.95
3	12	0.00024	0.066	15.8	2.3	1	23	287	309	287	309	0.98
4	12	1.5e-05	0.0042	19.6	2.1	1	23	317	340	317	340	0.97
5	12	0.00068	0.19	14.4	1.0	1	23	346	368	346	368	0.97
6	12	0.00042	0.12	15.1	5.9	1	23	374	396	374	396	0.98
7	12	1.2e-07	3.3e-05	26.2	1.3	1	23	402	424	402	424	0.96
8	12	3.7e-06	0.001	21.5	0.8	1	23	430	452	430	452	0.98
9	12	1.2e-06	0.00034	23.1	0.2	1	23	458	480	458	480	0.98
10	12	0.00016	0.044	16.4	1.4	1	23	486	508	486	508	0.98
11	12	3.5e-05	0.0097	18.5	2.2	1	21	514	534	514	536	0.96
12	12	1.6e-06	0.00045	22.7	0.7	1	23	542	564	542	564	0.98

Sequence Information

Coding Sequence: ATGGAAATAACTGTGGAACTGTTCGATAAAATATGCCGTGTTTGTTTGGAACAATCTACAGAATTGAAATCACTGTTTACAAAGTTAGACGGTGAAGAACGGAATTTATTAGAAATCCTTTCGTTCACGGCTAATATTGATGTTAAAAGCGTGGATACTCTTCCAAAACAAGTTTGTGGTAGTTGTGAATCTATAATGTGTAAGGCTGATGCTTTCAAACGCCGTTGCCTGCAATCTGAGACGATTTTAAATAATGTTTCCCAAAAAGCCACTGCGACGACTAATGTAGCACTAAAGTGCACGGTAAAAGATGAGAAAATTGATTTAAAGGAGAAATTAATTGCATTCGGAACACTGCTGTCCCCTACGCTGAAAAAAAGCAGTAATATCGAAGATATAGACAGTAAAATTGAAATTAATTTGCCAGCTTGTTCCAAGAAAGATTTAAACAACAAAGTTTCTGTGTCTAATACATTAGATAATTATAAACAGTCAGTCAAAGAGGAAGTGAAAGATTTTGATGATGATGACAATTTTTTAGATCATTTCGATGATGGTGGCCAGTTAGATATTATAGTTCCTGCCAAGAATACTGAAAAGAAAACAAAGGAAATTAAAACAGAAGGTAAAATTGCTATGCGATATGAATGCTATTGCCGCACACAGTTTACAGATAATGAAAAATATAAAGCTCATTTGAAACTGAAACAATGTGACGCAATCAAAAATTTTGGTTTGGATATTACGGATCTTCAATGTGCAAAATGCAGTAAACAATTCAGTTCAATAAAAGGCTATAAAATCCATCAACGCACTCACCACAACGAAAACTCGAGTGCTGACGATACAACTGAAACATTCCAATGTTCGTTCTGTTTACGTAAGTTCAAAAATAAGGTATCATTAGCCACGCATGTCCAGAGACACGAAGTGACAGACAACATCAAACATACATGTGAGATTTGTAAACGTGAATTTAGATATAAGGCGTACTTAGAAAATCATATATTAACTACTCATTCAAGAACAAATCAGTTTACTTGTGAAGTATGTGCACAAACTTTTTCAAGTAAAGAGACATTAGATACTCATAAAAAGGATCACGAAAATGAAAAGAAGCACCGTTGCACAGTTTGTAATAAGGGTTTCTATATGTTATGTACGTTAAAGGAACATATGAGGACACATACTGGAGAGAAACCATTCTTATGTTCACAATGCGGCAAAGGTTTCAGTCAGAAGACCAATTTGGCACAGCATATGAGAAGACATCAAGGTTTAAAGCCGTTTAAATGTGAGAATTGTGAAAAGAGGTTCGTCTCCAAAGGCGAATTGGAGGCCCACAATCGCAAACACAGTGGCGCACACCCATTCGTTTGCGACGAATGTGGCAACGGTTTCACCACATCCAGTGCCTTAGTCAAACACCGCAGAGTCCACACCGGCGAAAGACCTTATCACTGTGACCTGTGCCCCATGAAATTCGCCGCTTCAGGCACTTTGAAGAATCACCGACGGACACACACCGGTGAAAGACCTTTCCAATGTTCTTACTGCGAAAAGGCATTCGTCCAACGAAACGATTTGATTTCTCATATCAGATGCCATACGGGTGAAAGGCCTTATATTTGCACGCAGTGTGGCCAGTCTTTTAGGAAGGCTAGTGGACTGAAAACTCACGTGAAGATGCATATTAAAGATCCCGTGGTAGGTGTTAACGCTATTTTGACTGGTATGCATTGTACTGAGCAGTGA
Protein Sequence: MEITVELFDKICRVCLEQSTELKSLFTKLDGEERNLLEILSFTANIDVKSVDTLPKQVCGSCESIMCKADAFKRRCLQSETILNNVSQKATATTNVALKCTVKDEKIDLKEKLIAFGTLLSPTLKKSSNIEDIDSKIEINLPACSKKDLNNKVSVSNTLDNYKQSVKEEVKDFDDDDNFLDHFDDGGQLDIIVPAKNTEKKTKEIKTEGKIAMRYECYCRTQFTDNEKYKAHLKLKQCDAIKNFGLDITDLQCAKCSKQFSSIKGYKIHQRTHHNENSSADDTTETFQCSFCLRKFKNKVSLATHVQRHEVTDNIKHTCEICKREFRYKAYLENHILTTHSRTNQFTCEVCAQTFSSKETLDTHKKDHENEKKHRCTVCNKGFYMLCTLKEHMRTHTGEKPFLCSQCGKGFSQKTNLAQHMRRHQGLKPFKCENCEKRFVSKGELEAHNRKHSGAHPFVCDECGNGFTTSSALVKHRRVHTGERPYHCDLCPMKFAASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGERPYICTQCGQSFRKASGLKTHVKMHIKDPVVGVNAILTGMHCTEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -