Emi043403.2
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000441.1:839537-870797[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00086 0.24 14.1 0.2 2 23 143 164 142 164 0.93 2 18 0.0013 0.35 13.6 2.4 1 23 170 192 170 192 0.96 3 18 0.00014 0.04 16.5 0.3 1 23 282 304 282 304 0.98 4 18 0.0013 0.37 13.5 0.0 3 23 411 432 409 432 0.90 5 18 0.00065 0.18 14.5 0.1 1 23 446 468 446 468 0.93 6 18 0.00065 0.18 14.5 0.1 1 23 540 562 540 562 0.93 7 18 0.00065 0.18 14.5 0.1 1 23 634 656 634 656 0.93 8 18 0.00065 0.18 14.5 0.1 1 23 728 750 728 750 0.93 9 18 0.00065 0.18 14.5 0.1 1 23 822 844 822 844 0.93 10 18 0.00065 0.18 14.5 0.1 1 23 870 892 870 892 0.93 11 18 0.00065 0.18 14.5 0.1 1 23 967 989 967 989 0.93 12 18 0.00065 0.18 14.5 0.1 1 23 1061 1083 1061 1083 0.93 13 18 0.00065 0.18 14.5 0.1 1 23 1155 1177 1155 1177 0.93 14 18 0.00065 0.18 14.5 0.1 1 23 1249 1271 1249 1271 0.93 15 18 3e-05 0.0085 18.7 0.2 1 23 1302 1324 1302 1324 0.98 16 18 0.0013 0.37 13.5 0.2 1 23 1330 1352 1330 1352 0.97 17 18 0.00076 0.21 14.3 0.3 1 23 1358 1380 1358 1381 0.95 18 18 0.02 5.7 9.8 1.1 1 23 1394 1416 1394 1416 0.96
Sequence Information
- Coding Sequence
- ATGGATGGGGAAGGAGTTGACTTCAACCTCCAGTGGGAGGAAGTTGTGGTGAAGCATGATCCAGGTGCAGTTGAAACCGAAGAGGAGGTATCTGGCCTGGACAATGTGCAGAATGCCACATATGCCAACATGACAGAAGAAGAAATAATAGCTAACACGGACCAAATGGCAGCAGAGAACTTGATGTATCTATCACAAGATGTAGTCGGTGGTTACACAGAGACAGCTGAGCTTGCAGATGATCCCAGTGTGGAATGTGTCACTGAGGAAGTTATTACAGATGACTGGGTCATACCTGGAGGACAGGAAAGAGTTGAAGTCCCTTTGGAACAGTTAACGCATCCCATAGTGGATGTTAAAGAGGAAAATGATATTGATGTACCCTTGCCAACGGATCAAGATGAATACACAGCGATGCGGCCGTGGCCTTGTGACTTTTGTTCGCGGCGGTTCCGCAAGAAAGCTGCCTTAATGAACCACATGGTGGCGCATCAGAACGACAGACCGCACGCTTGCAACCTCTGTGGCGTGCGATATGTACGCAAGTGCGATCTCATGAACCATCTTAAAGTGCACGCGTTTGTGCCCGATAACCCAGATACCATAGATTATGAACTTTTAGAAAATAACCAAGTTGTGAAACTAAAGAAAAAGCGGGGTCGTCGGAAAAAGAATCCTGAGCCAGTGGAGAACGGCGTGTGGGAGAACATGACGTCAGCGCGCACGCAGCAGTGGTCGCGGCGCGCGCGCTCGCCGCCGAAGCCGCCGCCCACGCCGCCGTCGCCCGCCTCCGAGCCCACGCCGCCGTCGCCGCCGCCGCCCCCTGCCGACCCATCCAGACCCTTCGTGTGCAGGCACTGCGGGGTCGGCTTCGCTAGGGAGAAGGCGCTGCAGTCGCATGCTAGGgtgcacggcggcgactccccgatggagtgcggcgcgtgcggcgagctgtgctggtcgcgcgaggcgctggcggtgcacggcggcgactccccgatggagtgcggcgcgtgcggcgagctgtgctggtcgcgcgaggcgttagcggcacacgagcgcgcgcgacacccgcacctgccgcccgcgcacacCACGTCCAACAACACACCCTACGACGACGAGGACTCGGGTGACGACATGGAGTTCCGGCTGTCCCCGCTGTCGCACGGGGGCGGCGGCGGGTCGGAGCGCGCCGTGTACGACACGATGCGCGGCCCCGAGCTGTTCTGTCAGGACTGCGGCGTCGCCTTCCAGCGGGCAGACCTGCTGCGGAGACACGTCGCCGCCGCGCACAGCTACAAGCGGCACGACAGCACCAGCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGATGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGATGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGTATATAGCACACATAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTATAGCACACATAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGATGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCTGCGCCCAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGCACATAGCACACATAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGCACCGACACGTGCCACGTGGCGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTCTGTAGTCTGTATATAGCACACATAGCACCGACACGTGCCACGTGGGGCGAGCACACGTGCGACACGTGCGGCGAGAGCTTCAGCGACGCGCTGCAGCTCCTCGCGCACGCCGAGGGACACGCCGAGCGACACCGCGTCGCCGCCGCGCCCAGGTTAAAGCGAACATCTAAAGGTCGAAATAACGCTTCAATATCAAATAGTTCGAGACAGTTTCCTTGCAGAGTGTGTGGTAAAGTGTTCGGTTCGCGTAGCTCGCAGCAGATCCACATCCGCATACACACAGGAGAGCGGCCGTACGCGTGCAGGTTCTGTTGGAAGGCGTTCGCGGATGGCGGTACGCTCAGGAAACACGAACGGATACACACAGGCGAGAAGCCGTACGCGTGTGCGGTGTGTCCGCGCGCGTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTTCGAAGCCACCACTCCGCGCCTGACCGCCGCGCCAACGGTGGTCCCGCGTACTGCTGCGTTGTGTGCGGGCGGACGTTACACTCGAGCGCCGAGCTCGTGCAGCATCTCATCCAGCACTGCGACGCCAACACCGCGCTCAAGAGACAACCGCAGGTAACCTACACACACATACTAAACACCTACACACTGATAACTAACACgcgggccccgAACAAAACCCCCTTGGCGGCGGATGAAGGTGTTGGGCTCCGCCGCCAAAACATCCAACGGCCGCAGAGGATAGGCAGGACGGCAACGCAACACCGTATCTCCTCTTCCTCTGCGGCCCCACCGCGACGCGTCGAATGGCCGTGGGCAATCAGAGATGGCAATCTGGCTGTCCGACCACGAACGATCCCGAGAAGACAGCGGTCTCGGATAGCCGAGGGACCACTGTACTCGCACAGTACGAGGCGCTACCTCGTACTGTGCGAGTGGGGGAAGGCACTTCCAGAGACTGAGCCCTACTTACGGGACAAGCGTAACGGGGCCGAGGAGCAGTACACCCGCGTTCCCTGTGCCCCATTCCTTGCCCGCCACGCGGAGAGGCACTCGGCAAAAGAGTATCCCCAGCAACTCGTACGTCGCGTGTCGCGTCAGCACAGACACACGCTCGACGTGCACGCGCGTTGCGTGTCGTTAAGCACGAGAGGCTGGGCACGCTCTGCGGGTGCGGATACACGCAGGATATGCGTACTGGCCGCATAG
- Protein Sequence
- MDGEGVDFNLQWEEVVVKHDPGAVETEEEVSGLDNVQNATYANMTEEEIIANTDQMAAENLMYLSQDVVGGYTETAELADDPSVECVTEEVITDDWVIPGGQERVEVPLEQLTHPIVDVKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNPDTIDYELLENNQVVKLKKKRGRRKKNPEPVENGVWENMTSARTQQWSRRARSPPKPPPTPPSPASEPTPPSPPPPPADPSRPFVCRHCGVGFAREKALQSHARVHGGDSPMECGACGELCWSREALAVHGGDSPMECGACGELCWSREALAAHERARHPHLPPAHTTSNNTPYDDEDSGDDMEFRLSPLSHGGGGGSERAVYDTMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSTSTWGEHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVGRAHVRHVRRELQRCAAAPRARRGTRRATPRRRRAQVCSLYIAHIAPTRATWGEHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVGRAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVGRAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVGRAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPRSIAHIAPTRATWGEHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTHSTDTCHVARAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVGRAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVARAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLHIAHIAPTRATWREHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPSTDTCHVARAHVRHVRRELQRRAAAPRARRGTRRATPRRRRAQVCSLYIAHIAPTRATWGEHTCDTCGESFSDALQLLAHAEGHAERHRVAAAPRLKRTSKGRNNASISNSSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRTLHSSAELVQHLIQHCDANTALKRQPQVTYTHILNTYTLITNTRAPNKTPLAADEGVGLRRQNIQRPQRIGRTATQHRISSSSAAPPRRVEWPWAIRDGNLAVRPRTIPRRQRSRIAEGPLYSHSTRRYLVLCEWGKALPETEPYLRDKRNGAEEQYTRVPCAPFLARHAERHSAKEYPQQLVRRVSRQHRHTLDVHARCVSLSTRGWARSAGADTRRICVLAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -