Emi032349.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000304.1:542293-545673[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 1.3e-05 27.0 0.0 1 39 30 67 30 70 0.95
Sequence Information
- Coding Sequence
- ATGAGATCTCAAGATGAACACATAAAAAACAAAAAAAAAAATTGTAATAAAACAAAGAAAAAAATTATTGTGAGAAGAAAACAGTATACTGAGGAGAATTTAAAAAGAGCATTAGAAGCCGTAAAGCATGGTATGCCAAAAAAGCAAGCTTCTAAAACATTTAATGTTCCAAGGGGGACTATTCAATCTCGCTTGAGAAAAAATTGTAAAGACCTCCCTGGCCCCCCTCCTGTATTAAATGAAGATGAAGAAGACACCCTGGTAAAATGGATAGAAGACTGTAGCCGAAAAGGATTCCCAATAAGAAAGATTGACTTGCAGATTAGCGTAGGGAACTTTATAAAAAAGGCAGGTCGCAAAAATCCTTTTAAAAATGACATACCGGGCAAAAAGTGGTATAATCTTTTTATGCGTCGTCATCCTGAAATTAGCGAAAGAACACCAGAAGCAATAACATCTGCAAGTTCCGCTGTTTCAGAAAGTGATATAAGAGGCTGGTTCATAAAAATAGAAAAATTCATAAAAGAAAACAGCTATTATGATATCCTTGAAGATCCAAGCAGAGTTTTTAATGGTGATGAATCCAATTTTCAGCTGTGTCCCAAGAGTGGCAAGGTTATTGCTCTAAGAGGTGAAAAAGACGTTTATGAGGTGGATCATGCGGCTGCAAAGTCGACATTAACTGTTCTTTTTACCTTTGGGGCCAATGGAGATGTCACGCCTCCTATGGTGATATTCCCAAATAAGAGACTACCAAAAGATATAACCTTAACAGTACCAGATGATTGGGGCATTGGGTTGAGTGATTCGGGGTGGATGAAAACGGAGCTCTTTTATGACTACATCAAAAATGTTTTCCATCCTTACCTTTTACGAACAGGGCGAAAATTTCCAATAATTTTGTTCGTGGATGGCCATAAGACTCATCTTAGTCTTGACGTTAGTGAGCTATGTAAGAGTCTTGATATTGTGCTTATAGCACTTTATCCAAATGCCACCAGATTGTTACAACCAGCCGACGTCTCTGCCTTTAGACCTCTAAAGGTAGCATGGAAAGATAGTGTCTTGCAGTGGAGAAGAGATCATCCGTTAGAGACCCTCACAAAAACCAATTTCGTGCCAGTGCTGAAAGGTGCGTTAGAGAAAGGAATTAAACCTTCCACAGTGATAAATGGGTTCAGAACAACTGGTCTATGGCCGTGGAATGCTGATGCCATCAATAACAAAAAATGTCTAGGAAAAGGATCACAAGACATAACAACAAATGATGAGTCGCATTTACAATCAACTAGAGACCCAAGCAACATTATGACCAAAGATGTTTTCCATAAACTCATTACGGAAGAAAAGATGATAGAATTACAAAATACTTCCGTGGACAATCTTTCAGAAAACGACACGATTCTTAAAGAGATATGTATGTTTTTTAAAGGTAACAAATTTGATGACACAAAATTAACTGACTATGTGACAGATACTGAAAAGACTACGCAAGAGGACAAACAATCTAAGAACTACGTAAACATAGACAATTTACCACTGTTATTTCTAGACGATGCTATACCTACTAGTGACCATATAGAGGTTTGTAACGAAGTAGTTGATGAAGCAATTACATTTAATGGTGACCAGTTAGAGATTTACAGTGAAATAGTTGATGAAGCAAACCAATTTGAAACGAAAAATGGAAGGCAAAAGAGCTTTAATGATAGTTCGATTAATATTGAGCTAAATAATTCTATACCACATCAGATAGAAAACGAAACTGAAGTCAATATGGCAAGCCGCTTAGGGGCTAATGCAGAAAATTCTGTTGAAATCCACTCAACTCCAGTAAAAATACAGGATGTCCTAATCAAACAAAAAACTCCACAAAGAAAAGGAATAAGACAAGTCGAAAGATCCTCCTTCGTACTTACTTCAGGCGAGTGGCAGAAAAGGGAAAAAGAAAAATACAGAGCAAAAAAAATTAAAGAAGAACAAGTAGAAAACCGAAAAAAAGCCAAACTAGAAAAACAAGAGCAGAAGAAAAATTTACCAAAAGCAAAAAAAAACTAA
- Protein Sequence
- MRSQDEHIKNKKKNCNKTKKKIIVRRKQYTEENLKRALEAVKHGMPKKQASKTFNVPRGTIQSRLRKNCKDLPGPPPVLNEDEEDTLVKWIEDCSRKGFPIRKIDLQISVGNFIKKAGRKNPFKNDIPGKKWYNLFMRRHPEISERTPEAITSASSAVSESDIRGWFIKIEKFIKENSYYDILEDPSRVFNGDESNFQLCPKSGKVIALRGEKDVYEVDHAAAKSTLTVLFTFGANGDVTPPMVIFPNKRLPKDITLTVPDDWGIGLSDSGWMKTELFYDYIKNVFHPYLLRTGRKFPIILFVDGHKTHLSLDVSELCKSLDIVLIALYPNATRLLQPADVSAFRPLKVAWKDSVLQWRRDHPLETLTKTNFVPVLKGALEKGIKPSTVINGFRTTGLWPWNADAINNKKCLGKGSQDITTNDESHLQSTRDPSNIMTKDVFHKLITEEKMIELQNTSVDNLSENDTILKEICMFFKGNKFDDTKLTDYVTDTEKTTQEDKQSKNYVNIDNLPLLFLDDAIPTSDHIEVCNEVVDEAITFNGDQLEIYSEIVDEANQFETKNGRQKSFNDSSINIELNNSIPHQIENETEVNMASRLGANAENSVEIHSTPVKIQDVLIKQKTPQRKGIRQVERSSFVLTSGEWQKREKEKYRAKKIKEEQVENRKKAKLEKQEQKKNLPKAKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00666466;
- 90% Identity
- -
- 80% Identity
- -