Basic Information

Insect: Euclidia mi
Gene Symbol: clz9_5
Assembly: GCA_944738845.2
Location: CALYKX020000069.1:2732602-2734785[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-08 2e-05 26.4 0.1 2 38 16 53 15 57 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-08	2e-05	26.4	0.1	2	38	16	53	15	57	0.90

Sequence Information

Coding Sequence: ATGGTGCGGACTTATAAACCAAAAAATACAAGACAAGATGTGGATGAAAAATCCATGCAGTCAGCAATACAGGATGTTATGCAAGGAGTATTGTCATATAGAAAAGCTGCGGCCAAGTACAATTTGAAATTGTCAACATTAGAAAGCCGAGTAAAAAAATACAAGGATAGCAATTATGCTGAAGGTTCAAGCAGCCGTACATTTGACTCTAAATATACAAGTTTCCAAGTCTTTTCTAAGGAAgaagaaaaactgctaaatgattatattatcaaatgttgtaagatgcattatggacttacgacgattcaagcaagaaagctagcatatgagtatgccaaatctttgagtttgaaatatccagcaaagtgggaagaaaataagatggctgggaaagactggatctatggttttcgcagaagaaacccggaactcagtttacgcaaacccgaaaacacaagcgctgccagatcttttgcctttaacaaaacttcggttgccgagttttataccaacttgaagacagtgttggagcgacatccattaactgctgatagaatctttaatttcgacgaatcaggtgtatctaccgttctagctactcccaaagtcttggctccaagatgtcaaaaacaagtcggacaaattgtatcagctgaaagaggcgagctcgtaacttttggtggcattatatctgccagtggaaataccattcctccacttttcgtgtttccacgtgttcattataaagatatttttctcgaaggagcacccgaaggaagtgtcggcgctgcaaataaaagtggctggataaatagcgatatatttgtctccgttttgaaacatatccagaagcacacactctgcaccaaagataaccccatattattgttgtgtgacaatcatgaaagccatgtttctctcgaagccatcaactacgccaaagaaaatggcataatttacctatcttttccaccacatacatctcaccgcctacaaccacttgatgtaggagtctttggaccatttaaatccaagttgaaaattgctttcaataattggcatttaatcaacccaggcaaagcaatgaccatttacaatattccaaagctTGTGAAAATTGCATTTTTAGAATCATTCACAGCAAAAAATATCACAAGCGGGTTTAACAAACCCGGAATATGGCCTCTTAATGAATTAGCCTTTAGTGACGAAGATTTTGCTCCAACTGAGGTTTATACATCCGGTAACGTAGAATATGTGCCTCCTACTCAAAACGTCGTTGAAGATTTGTCAGCACCTACTCCGCAGCCAAGTGTCTCTGATATCTGCCAACCCTCTTCTTCTGGAACACAAGATTTCTTGGAGATTCCGCGAGAATCTACAGAACAAACTATTAACTCACCATTGATAACTAATGATGATGAACTTCAAAGGTTTAATTTAGATGCTTGTGAACCAGATGCTTTGAATAATTCACCAATCCTTCAAATAGTAGCACCTGTGAAGACAGTTTTGACACCAGAGGCAATTCGACCCTATCCGACTGTGGTAAGAATTAATAAAACAAACAAAGGACGACGACCAGGAAAATCACGTATTTATACTGACACACCCGAAAAAAATCTAATTGAAGAAAAACACAATGAAAAGCAATTGAAAAAGCTAGAACAGGAAAGAAGGGCTAGAGCAAGACAAATTAAACGTAGCTTAGCTGATTTTAATTTAAAAACGAAGAACAAGAAAGCTAAAAACACAGAACTTGATGAATCTGATTGTGATGGATCTGATATAAGCTTTCAAGAGAGTTCAACTTCTATCACAGATGAAGATGAAACCGAGCATGAAATGAACGGAAGCCAATTGACAGTTGATGTAATACCAGAAAATATTAAAGACGGTTCGTTTATTTTAGTGAGGTTCCCTAAGAAAAAAAGTATTATTTACTATGTAGGAAAAGTTGTCGGTCACTATAGTCAGACTGAATTTAAAGTATCTTATCTAAGAAAGAAGCCAGGCTTGTCATGGACATTTGTTTTCCCTAATGTTGAAGATATTCATACTGTTTATATAACTGATATTGAAATGGTTCTTCCTGAACCTAAGCCTCCCACAGTTTGTACTTCTAGAACATCAAAACTTTTCACTTTTTCAGTAAATTTTTCTAATTTTACTGTTCAATAA
Protein Sequence: MVRTYKPKNTRQDVDEKSMQSAIQDVMQGVLSYRKAAAKYNLKLSTLESRVKKYKDSNYAEGSSSRTFDSKYTSFQVFSKEEEKLLNDYIIKCCKMHYGLTTIQARKLAYEYAKSLSLKYPAKWEENKMAGKDWIYGFRRRNPELSLRKPENTSAARSFAFNKTSVAEFYTNLKTVLERHPLTADRIFNFDESGVSTVLATPKVLAPRCQKQVGQIVSAERGELVTFGGIISASGNTIPPLFVFPRVHYKDIFLEGAPEGSVGAANKSGWINSDIFVSVLKHIQKHTLCTKDNPILLLCDNHESHVSLEAINYAKENGIIYLSFPPHTSHRLQPLDVGVFGPFKSKLKIAFNNWHLINPGKAMTIYNIPKLVKIAFLESFTAKNITSGFNKPGIWPLNELAFSDEDFAPTEVYTSGNVEYVPPTQNVVEDLSAPTPQPSVSDICQPSSSGTQDFLEIPRESTEQTINSPLITNDDELQRFNLDACEPDALNNSPILQIVAPVKTVLTPEAIRPYPTVVRINKTNKGRRPGKSRIYTDTPEKNLIEEKHNEKQLKKLEQERRARARQIKRSLADFNLKTKNKKAKNTELDESDCDGSDISFQESSTSITDEDETEHEMNGSQLTVDVIPENIKDGSFILVRFPKKKSIIYYVGKVVGHYSQTEFKVSYLRKKPGLSWTFVFPNVEDIHTVYITDIEMVLPEPKPPTVCTSRTSKLFTFSVNFSNFTVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034477;
90% Identity: iTF_01431829;
80% Identity: -