Emi050001.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000524.1:1243205-1245436[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-10 1.3e-07 33.4 0.0 3 36 30 63 29 66 0.93
Sequence Information
- Coding Sequence
- ATGGATGATTTCAGAAATAAAATGAAAACCAAGAAGAAGACTGAAAATGAAGGAAACCGTGGAGAAAGAAGAAAGAAATATAACCTGGAGAACTTAAAAAAGGCCCTACATGCAGTTAAAAGTGGAATGAGCAAGAAACAAGCAGCTAAAGAGTATCAGGTACCTAGATCAACCATACAGTTTCGGCTTAATAACCCTGAGAAAATAAATCCTCGCCCTGGACCTACCACAGTATTAACAGATGACGAAGAAAATGTTCTCGTCAATTGGATAATACAAAGTTCGAAGAAAGGATTTCCTCGCCGAAAAGAAGACATTCAGTATAGTGTCTCTGAATTTTTAAAGAAGATTAAGAGGCCTAATCCTTTTAAAAATGACCTTCCAGGTGATAAATGGCTAAAACTATTTTTAAAAAGACATCCTGAGGTTGCAGTTCGTACTCCCGAATCTGTCACAGCCGCAAGCTCCGTGGTATCGGAAAACGATATCAGAGCCTGGTTCGATGGCATTGAAAATTATTTAAAAGATAATGCAATGTTTGATATTCTATCAGATCCCAGTAGAGTTTTTAACGGCGACGAAACAAATTTCTTGCTGTGTCCTAAAACAGGTGTGGTGCTAGCATTAAAAGGCGACAGAAATGTTTACGAAATAGACAGAGGTCAAGCTAAATCTTCGATAACAGTAATGTTCACGTTTTGTGCCAACGGAGATTTAACCCCTCCAATGATTATTTTACCTTATAAGCGCCTTCCTGGAGATATTGCTAACAAAGTACCAGAAGAATGGGGTATCGGATTAAGTGATAATGGCTGGATGAAGGCGGAACTATTTTATGATTACATAAAAAATGTACTGCACCCATATCTTTTAAAAAAGGGTCAAATGTTTCCAATTATATTATTTGTTGACGGCCACAAAACTCATCTCACGCTGCAAGTCAGTGAACTTTGCACTAATTTGCAAATTATACTAGTTGCTCTTTACCCTAATTCCACTCGAATTTTGCAACCTGCTGATGTAGCAGCATTTTTTCCCTTAAAGTGTGCTTGGAAGCAAAGTGTCCTTCGTTGGAGGCGAGATCACCCAGCACAGGCTTTGACGAAAGCGGATTTTGTGCCTATTCTAAAAACTGCGATAGATGTGTCTTTGAAACCTGCTACTATTAAAAATGGTTTCAAAGCTTGCGGTATCTTACCATGGAATCCTGATGCTTTGGATTATACAAAGTGCTTAGGCAATTCCAAGGTAAAAGAAACAAGGCAACCACACTGTTTAGGTATGGATGCAAACGATAGAAATCGAATGACTAAAGAGAATTTTATTAATATTGTCGGAATGGATAATATAAATAAAATAAACAAAAATGATATAGATTTGATACTGGACGCACCTAAACTCCTCCAAAATCTTTGGGCTTTTTTTGAAAACTGCTTACCAGCATCAAAAGGATCAGATATTGAACCTCGTGCTATTTCTGATAACACAACTTCGGAAAGTCCATTGGTACAAGAACACTTGGATATTGAAAACATAAATGTATTATTCGCAGACAATGCAGAGGAAATTAATGAAATTTCTAGCATTCCCTATTCCAATGAAGTTGAAATACAAAATACTAGCCAACCTAACTTACCTGTCATCTCAGTGATTTCAGAAGAACATTTAACGTTGCCGGCAAATAAGATATCATCTTCTTTACTCCCCAAAACTCCAACGAAACTTAATTTGACACCAGTACATCTTAATGACATTCTCAGCCTCCCCAAGACACCACAACGTAAAGGAACCAAAAATTCAGAGAAGACACCTTTCGTCTTAACATCTGAAGAATGGCAACGAATTAATACTGAAAAGAAAAAGGCCAAAGAGCTAAAAGAAGAAGGGATTAAGAGAAGGAAGTTAGAGCGAGAACAAAAGAAGTTACAAAAGAATCAAACACAAGATAAAGGAAAGGGCAAAGGGAAGAAAACACGAGGCATCATACAGAATGTTAAGAAAAATTTAATGAGCAAGGAATTTTACTTATCCTCACCGCAAGATAACGATAAAGAGAACACTTCTCAAAATATACAAAATAGAGTTGGAGTTGAGTTGAATGACCGACCCATTGCAGAGCAAGAAGATTACATTTTTCCTTCTACGAGTACTTCGAGAGAGATAATAAAAAAAGGTTTTACAGCAAGTGAGATTTTCAAAATGCTAACAGATTCAGATGATGAAGATGATTAA
- Protein Sequence
- MDDFRNKMKTKKKTENEGNRGERRKKYNLENLKKALHAVKSGMSKKQAAKEYQVPRSTIQFRLNNPEKINPRPGPTTVLTDDEENVLVNWIIQSSKKGFPRRKEDIQYSVSEFLKKIKRPNPFKNDLPGDKWLKLFLKRHPEVAVRTPESVTAASSVVSENDIRAWFDGIENYLKDNAMFDILSDPSRVFNGDETNFLLCPKTGVVLALKGDRNVYEIDRGQAKSSITVMFTFCANGDLTPPMIILPYKRLPGDIANKVPEEWGIGLSDNGWMKAELFYDYIKNVLHPYLLKKGQMFPIILFVDGHKTHLTLQVSELCTNLQIILVALYPNSTRILQPADVAAFFPLKCAWKQSVLRWRRDHPAQALTKADFVPILKTAIDVSLKPATIKNGFKACGILPWNPDALDYTKCLGNSKVKETRQPHCLGMDANDRNRMTKENFINIVGMDNINKINKNDIDLILDAPKLLQNLWAFFENCLPASKGSDIEPRAISDNTTSESPLVQEHLDIENINVLFADNAEEINEISSIPYSNEVEIQNTSQPNLPVISVISEEHLTLPANKISSSLLPKTPTKLNLTPVHLNDILSLPKTPQRKGTKNSEKTPFVLTSEEWQRINTEKKKAKELKEEGIKRRKLEREQKKLQKNQTQDKGKGKGKKTRGIIQNVKKNLMSKEFYLSSPQDNDKENTSQNIQNRVGVELNDRPIAEQEDYIFPSTSTSREIIKKGFTASEIFKMLTDSDDEDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00896726;
- 90% Identity
- iTF_00677504;
- 80% Identity
- -