Basic Information

Gene Symbol
pnr
Assembly
GCA_037177015.1
Location
JBAGKK010482941.1:1712-2922[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-18 2.3e-14 54.9 3.2 1 34 11 43 11 45 0.97
2 2 4.4e-19 3.5e-15 57.5 6.2 1 35 70 103 70 104 0.98

Sequence Information

Coding Sequence
ATGGAATTTCAATTTGGAGAAGGTCGAGAATGTGTGAATTGCGGAGCAATTTCCACACCCCTTTGGCGAAGAGATGGAACTGGTCATTATCTCTGCAATGCTTGTGGTCTGTACCACAAAATGAATGGCATGAATCGTCCACTTATCAAACCTTCCAAGCGACTGATCTCCGAATTCCAGACTGCAACAAGGCGGCTTGGGCTCTGCTGCACAAATTGTGGAACTCGAACAACCACCTTATGGAGGCGCAATAACGAGGGCGAACCAGTCTGTAACGCCTGTGGTTTGTACTTCAAACTTCACGGTGTCAACCGGCCACTAGCCATGAGGAAAGACGGAATCCAGACCAGGAAACGGAAACCAAAAAAGACACCAGAACCCAACGCCAGACCTTCGAATGGTGACCATGAAACTTCAGCCTCAACCACATCCTCTCCATCCAATGAGGTGAAAAGTAGTCAATCACAGCAGCAGCACCAGGTGGAAGTACCAAAATCCTCCAGTTCATCAACAACGACAGAAAGGCCTGTATATCTTGGTCACACGTCTCTTCTCGCAACTGGAAGTACCCCAACTGTAAAAACGGAACCACGAAGTTGCGAAGGAGTCGTGGGTCAACCCTATTCATCTTATTATCCACATCCTCATCAGTTGAGCACTCCAACGAGCGAGCACCAACAATCCAGCTACTATGGAGCCCAAGAAGCACCTTATCATCATCAGCATCACGTCACTGCAGCAGCAAAACTATTAGCATCTTCCTAG
Protein Sequence
MEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARPSNGDHETSASTTSSPSNEVKSSQSQQQHQVEVPKSSSSSTTTERPVYLGHTSLLATGSTPTVKTEPRSCEGVVGQPYSSYYPHPHQLSTPTSEHQQSSYYGAQEAPYHHQHHVTAAAKLLASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00064852;
80% Identity
-