Epri064564.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010289038.1:8753-16596[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.016 5.6 9.8 2.1 1 23 382 404 382 404 0.94 2 15 0.56 1.9e+02 5.0 1.9 2 23 412 434 411 434 0.87 3 15 6.6e-06 0.0023 20.5 2.8 1 23 440 462 440 462 0.98 4 15 2.4e-06 0.00083 21.9 2.7 1 23 468 490 468 490 0.98 5 15 7.7e-07 0.00027 23.4 1.8 1 23 496 518 496 518 0.99 6 15 0.12 42 7.0 2.3 1 23 569 591 569 591 0.97 7 15 0.0073 2.5 10.9 0.1 1 23 597 619 597 619 0.95 8 15 0.83 2.8e+02 4.4 3.9 1 21 639 659 639 660 0.91 9 15 10 3.4e+03 1.0 1.3 3 22 669 688 667 688 0.82 10 15 0.049 17 8.3 0.1 2 23 696 717 695 717 0.95 11 15 2.1e-05 0.0073 18.9 6.2 1 23 727 749 727 749 0.98 12 15 0.0026 0.89 12.3 0.3 1 23 755 777 755 777 0.98 13 15 3.1e-05 0.011 18.4 0.5 1 23 783 805 783 805 0.98 14 15 0.00014 0.049 16.3 0.6 1 23 811 833 811 833 0.98 15 15 1.6e-05 0.0056 19.3 1.6 1 23 839 862 839 862 0.98
Sequence Information
- Coding Sequence
- ATGAATATTTTAATGAGAGATTCCAATGGGCAATTAATCGCAATTCCCATCATACGAGACGCGGATTCATGTAGGAGAATGCAGCtggaaaatggaataaaaatgaataagacAAACTCACAAAAAGAAGGAAACAAGGATGTTTATAACATTACTGCTTCTTTAGCAGccaataaacaattgattacctttgaaaaaaactcaGCCTTGGATGAGGGGAAATCATTATCAAACAGTGATTCAAATTCCCATCAAGTTATTTTTCTGGAATCACTGGATTTGGATACATCCCAAAATATTGAAGAGTCTACAATTGTAGAATCATGTGTCTTTCCTGACAATAATAATGTGATCAATGAGCCACTAAATTTAGATTCGAACGACATTGAAAATGTAGAGGAATTTAATATTCCTGATTCCATAGAATTGTACCATAATAAGGAAATACTTAGAAAAGTAAATTTGGTTGTAACAAATAATGTCTCTTCACCACTTTGTCGACTTTGTGCCCAACAAAGTGAAAACATGGTCTACATTTTTGGATTATCGAAAGAAGAGAAAGATTTAGCAGAGAAAATTAATGGCTGTTTACCGATTAAAgTGCAGGAGACGGATACTTTTCCAAAGAAGATTTGCTTCTCGTGCCTTGAAAAAGTAGAGCTTGttcacaatttttgtaaaacggTATCAGAAGCCGAGGCAAGTTTTGTAAAAAGTAAAGAGAGTCTTTTAAACAAATCTGCGGAGCTGGAGGAAAAGCCTTTTCAACCAGAGACTCAGGTTATTTACGATTGTCCTGAAATGCTCTTTAGCAAATCAGTTGTCGAAAACAGCTTTGACATCACAGAAGTGAAAGTTGATGAAGCTACAGTGGGACATAATTCTGAAAACGTATCAAAACTTTCGAAAGAAACTGCATTCGTTGAATCTATTCAGGAAGATATCAATGAAGAGATAAGATGTCGCATTTGTGACATGAAATTCTGTTCGACAAGAAAATGTTATCTTCACGCAGCTTCTCATtcttcttctaatttctttccttGTGGTCTTTGTGAGAACATCTCGCAAACTATGGAGAATTGGAGAGACCATTTCACAGAGCACAGCGATGGTAAAATATGCGAAAGAAGAACAGCAAATTACGAATGTCAAATTTGTAAGAAGAAATTTGTTTCCGAGGGGCGATTGAAGTTTCACCTTAAATTCCATGAGCCTGGTGCCAAACCTTGTTACTGTGAAAAGTGTGACAAGTTTGTTCCTTCTGAATCAGTTCTTTATCATCATTCTGTTATGGTACATTTGCAGTTTAGAGAATTTTGCTGTGATATCTGCGGTATTCAATTCAGATCTCAATCACAGCTGGATACTCATCAACGAAAGCACAAAAATGAGCGACCTTACGAGTGCAGTATTTGCAATAAGCGATTTTACTCGAACGACAGCCTCCGGAGACACAAGAAACTGCACCTTCCTGACAAACCTTTCCAGTGTGATCAATGTGGCAAGAGATTTGATCGAACTAATTCACTCACCAGGCATCTACTCACTCATCAAGTCGAGGCCAAACAATCGATGATCTGCCAGGTCTGCAAAGCTTGCAACCAAGTTTTTCTTGATGTTTCTCAATCTGAGTCTCATGTCGAAACCTGCAATGCAATCTCCGATTTCCCtcagattgaagaaaaaaatctcgACGCCATGTACAGATGTGAATTCTGTCAGCGATGTTACGCCTCCATTGAGTTTGCCAAGATTCACGTAAAATCTCATTCCGGTCCATTGCCTTATGTCTGCACAGTGTGCGACGTGACCTACGCAACTTATAATCAAGTCACAGCTCACAAAAGTGCTCACAGAAAATCAGTTCAAGACCTTCACTTGAAGGAAGCAGAAAATACCGTAACAAAGTTCTTCTTCTGCCAGTTTTGTGATAAAACATTTCTGCACTTTACCAATATGAATTTGCATCGAAAGTCATGCCTCAACAGTAAACACTGGACTTGTCGGTGTTGTGCTGCTATTTTTCAAAGCAGGCAAGAACTAACCAAGCACAAAAGAAGAAGGGAGTCTTATGAAAATTGGCCCTGCGAGGATTGCGAGATGACATTTGGAAATGTGTGTGGTCTCGAGATTCATAAAGAGATTCACACGGCAACGTACGCAAATAAAAAGGTTTTCACCTGCTGTTATTGTGGAAAGGATTTCCAGCAAaaaacACATCTAACTATTCATATAAGAAGTCACACTGGTGAAAAACCGTTTCCCTGTGACTTGTGTGATAAGGCATACAGTATTAAAGCAGACAGAGACAATCATCGCAGGACTCACACTGGAGAACGTCCTTTCAAATGCAAGATTTGTGTAAAGGCATTTACAAATCCAGCTAGGCTTCGAGAACATTTGCTGTATCATTCGGATGTTCGTCCCTATAAGTGCAATTATTGTGAACAGGCTTTCAAAAAAGCCAACGCAAGGAAAGTTCATATGCTCATTCACACTGGAGAAAGACCCTTTCAGTGTGAAATTTGTGGCAACTATTTCCGAAGATCAGGAGATATGAATAAGCACAAAAGAACTCAGCATACAATGATTCTTCAAGTTGATAACTTTTTGCTTTCTCAGGAAGCTTAA
- Protein Sequence
- MNILMRDSNGQLIAIPIIRDADSCRRMQLENGIKMNKTNSQKEGNKDVYNITASLAANKQLITFEKNSALDEGKSLSNSDSNSHQVIFLESLDLDTSQNIEESTIVESCVFPDNNNVINEPLNLDSNDIENVEEFNIPDSIELYHNKEILRKVNLVVTNNVSSPLCRLCAQQSENMVYIFGLSKEEKDLAEKINGCLPIKVQETDTFPKKICFSCLEKVELVHNFCKTVSEAEASFVKSKESLLNKSAELEEKPFQPETQVIYDCPEMLFSKSVVENSFDITEVKVDEATVGHNSENVSKLSKETAFVESIQEDINEEIRCRICDMKFCSTRKCYLHAASHSSSNFFPCGLCENISQTMENWRDHFTEHSDGKICERRTANYECQICKKKFVSEGRLKFHLKFHEPGAKPCYCEKCDKFVPSESVLYHHSVMVHLQFREFCCDICGIQFRSQSQLDTHQRKHKNERPYECSICNKRFYSNDSLRRHKKLHLPDKPFQCDQCGKRFDRTNSLTRHLLTHQVEAKQSMICQVCKACNQVFLDVSQSESHVETCNAISDFPQIEEKNLDAMYRCEFCQRCYASIEFAKIHVKSHSGPLPYVCTVCDVTYATYNQVTAHKSAHRKSVQDLHLKEAENTVTKFFFCQFCDKTFLHFTNMNLHRKSCLNSKHWTCRCCAAIFQSRQELTKHKRRRESYENWPCEDCEMTFGNVCGLEIHKEIHTATYANKKVFTCCYCGKDFQQKTHLTIHIRSHTGEKPFPCDLCDKAYSIKADRDNHRRTHTGERPFKCKICVKAFTNPARLREHLLYHSDVRPYKCNYCEQAFKKANARKVHMLIHTGERPFQCEICGNYFRRSGDMNKHKRTQHTMILQVDNFLLSQEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -