Epri096647.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010495978.1:14240-18597[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 3.1 1.1e+03 2.6 4.6 2 23 312 334 312 334 0.96 2 22 0.1 35 7.3 2.1 1 23 394 416 394 416 0.97 3 22 2 7e+02 3.2 0.6 1 19 423 441 423 441 0.97 4 22 0.059 20 8.1 0.4 1 23 465 487 465 487 0.98 5 22 0.011 3.7 10.4 0.2 1 20 526 545 526 547 0.94 6 22 0.52 1.8e+02 5.1 1.6 1 22 559 580 559 582 0.81 7 22 0.011 3.7 10.4 1.4 2 23 588 609 587 609 0.94 8 22 0.00055 0.19 14.4 1.3 1 23 644 666 644 666 0.96 9 22 0.00047 0.16 14.7 0.1 1 23 672 694 672 694 0.97 10 22 4.4e-07 0.00015 24.2 0.5 2 23 733 755 733 755 0.96 11 22 0.00029 0.1 15.3 0.5 3 23 763 784 761 784 0.96 12 22 3.5e-05 0.012 18.2 0.1 2 23 793 815 792 815 0.96 13 22 2.9e-05 0.01 18.4 0.3 1 23 823 845 823 845 0.93 14 22 0.16 54 6.7 0.0 2 19 894 911 893 912 0.95 15 22 0.0012 0.41 13.4 0.0 2 23 933 954 932 954 0.96 16 22 0.0021 0.71 12.6 1.6 1 23 966 988 966 988 0.97 17 22 0.0077 2.6 10.8 0.2 2 20 1005 1023 1005 1025 0.91 18 22 0.014 4.8 10.0 0.7 2 23 1055 1077 1054 1077 0.93 19 22 0.00064 0.22 14.2 0.3 2 23 1100 1122 1099 1122 0.92 20 22 0.0019 0.64 12.8 1.3 1 23 1128 1152 1128 1152 0.95 21 22 0.34 1.2e+02 5.7 3.1 1 23 1157 1180 1157 1180 0.93 22 22 0.67 2.3e+02 4.7 0.6 2 23 1212 1234 1211 1234 0.93
Sequence Information
- Coding Sequence
- ATGATCGAGGTAGAAGAGTTGCAGGGTTTCGAAAGTGCGTGTAGACTTTGTTTAACCACCGATGAAACAAGATCGTCTATTTTTGGTGCAGCACACACCTTAGATCCTCtggtagataaaataaaaaattgtttgtctgtTCAGATTTCTCAGGAAGACAAGTTATCTACTTTAATTTGTATCACTTGTGTTAACAAAGTGAACCAATGGCATCAATACAAAGAATCGTGTCTTCAGTCCCaggaaaaattgattcaatggCTTGCCAATCAATCCATTCCAATTGCGGTCGTGACTGTAAAGAAAGAACCGGTCAGtcaagattttgaagaaaacttgCCAGCATCTAATAAGGATAATAATCTTGAGAAACCCCCAGAGAAAGAAGTACTCACAACAATACAAACCACCGAAATACAAATTGATCAGGAGAAAAATACAGTAGAACCAGACAACCTTGAGGAAGCTTCTAAGAAAGATGCAGTCAAAGTCCCAGAAATGGACGTTGATCAGGGAGAAAATGAAGCAAGAGAGTCCGAAGTTATCGAGAGTACACCCAACATTTCTGAAAGCGCGAACGAAATCGAAACCCGAATGGAAATCgagcaagaaaaagaaacagaagTGGAACGTGAAACGAGAGGAAGTTCCAAGCGAAGATTGTCCAAAGACAGTGGCAATGAAAACAAACGATTAGTCACCATTCCAATTAAAAACGAACCTCAGGATGAATTCGAGGTCGACGAGAATTTGGAGATCGAGTCCACAAGCGGCGAATTGCTGCTAAATCCCCTCGCGATGGCGAACAATGATAAAAACGACAATGTACCAGAAGTTGCTCCCATCCAGAAAAGTCCCTCGTCTCTCAAAGGCAAGAAGAAAGTGCGTCGTGGTCCTCACACACATTTCCGCGGTGCTCGGATCTTCAAACGAAAGTGTCTACACTGCCAAATCAATCttcattccaaaaattcttaTGCCAAACACATGGCCAGGTTTCACAGCGTCGTGGGGAAATCCGTTCCGCAACCGACAATCGAGCCAGAATCTTCGCAACGAAACGATCTTATCGAGGAAGCTGAGGAATTGATCGAGGACGTCGAAGAGGAACTGGAAAACTTGGGAGAAGACGCGCCTTTAACTCCAGTCCAGCAAAATATCATCAGTCAACTCAAGACCTTTTCCTGCTACTCGTGTGAACAATCATTCCAGGATCGGCGAAGTACTTTGAATCATATTAGACAACACATGCCGGATTTGAGGTCCTACACTTGTGTTGCTTGCCTGACTGAATTCTCCGATCGCACTTCGTATAAACAACACTGCGAAGCCTCGTTCGAATGTGCCATGAAGATCGCTTTGGTTGTTCCGATTCAAGGAGTCGAGAAATACTTCACCTGCAATATGTGCCTACGGCCTATGCCCAACAGAAAAGACCTGATTAGTCACCTGTCCAAGCATTCGGACAAGCAGTACGAAGAACTAATGTCGCCTGCAAAATCTCCACCGAAACTCACACCGATGGGACCTCTACCCTCTTCAGGTCCTTATGGAAAAGGTGATCCGGCCTACAATCACGAGTGCGATTTGTGTGGAATGATCTACAGATACAAGCCAAATATGATAAAGCATCGAGAGCTTTGCGCAAGTTTGCAGCCGGAAGGCAGAACTTCTTACAAGTGTGTCGACTGTGGAATGACATTCCTTGTCTTCAGCAAATTCCACAGTCATGTCACCTTGGAACACAAGAAGAAGGAGTTGAAGTGTCCCAAGTGTGCTGCCAAATTCCGTTCCCCGAGCGATTATCTCACTCATCATGAATTCCATCGTAAGAAGAATGACGCCAAGGAATCCGCGCAGAAAAATTGGAgccaggatttcgaaaaaacgGAGGGAGAAAATCTACATCTGCAGTCTAAGGCTAAAAAGTTTGCCTGCTCTCTGTGCAATCTGCACTTTAGTTCCAGGGCAGAATTGACCGAACACAGGAATCTGCACCTGAAGGTTAAGATATATTCGTGTGTGATTTGCCGCAGTATGTTTAGCAGTCCCGGAGCCTTGGAGATTCACATGAAGGATCATGGGATTGATGATCCGACGGAGCGAACCGCAAATAGTTCCTGCATGGAGTATGGACAGGAAGTCGAAGCCGGGGCAAATCCAGGAACCAATAACTCTGGTCAAAACCGCAAGAATGAGTGTTTCGACTGTGGAAAGACCTTCTCTAATCTTGCGAATCTTCGCAGACATGTGAGAAACGCCCACGGGGAAGAGCGACGCATCGACTGCACCGAATGCGCCAGGACTTTCAAGAACAAAGAATCTTTTGATGAACACATGCGCAACGCTCACAACTCATCGGAGAAAACTGTTCTCACTTGTCCCCAGTGTCCAAAGACTTTCGTCTTCCAAGCCAATTTGGATCTGCATCTTCGCAACGCACACGTCAATAAGGAAAAAGGCAGTCACGAGTGCGACATCTGTGGCAAGACCTTCGTTGAGGAATCTTCCCTGAAAATCCACCGAGGCTGGCACAATCGAGCCAACTCCCGGTTCAGTCTGGAAAACTACGAGAGAGACCGACCGGAGAATTCGATTCCTGGCAGTTCTAAGCCAGCCAAGGCTCGGAAATCGTTCCCGAACTCCTCTCCAGTTCAACAGCAACCACTGATCGAACTGCAGTGTCAGGTTTGCGATGATAAATTCGTGGATGTGGCGGATTTAAGGAAACACGTCTGGGACGTCCACTGCGCTCGCACCACGAAACCCGAGAAACCTTTCCTTCAAGAAGATCTTCAGTGTGAACTCTGCACGAACGTTTTTCCTGATCAACAGAGTCTCGAGATTCACATGGAGTGGCACGAACGCAACCCGATTTTAAATAGCTCCGGAAACTATCGATGCGACATTTGCGACAAGTATTACAGCTCGAGTAAGATTCTCTGGAAACACAAGAAGTTGCACAAGGTTTCCCAGGCTCTGAAGTTCCAATCTTTGCCGATGAAGAAGCCAACTTGCAATCCTTGTGGAAGGACCTTCACTGCCGAGTCTTCGCTCAAGAGGCACAAGGCAATGTCTCCTGAATGCCAGACTTATTTCACGGGACGAGGACTTGCGGATCAGGAACTGAGATCGGAAGATCTTGCCAAGAAACGACCGGTGACCTGTCACATTTGCAAAACAGTTTTCCCCAGCATGAGTGTTCTCTATCAACACAAACAGCTGGTTCACAAGACTAACTTTCGCGAGAGAAAGTCGAGCAACGAGTTTGTTCCTTTGACGAGTGTCGAGGGTGTGAGCTGCAACGTTTGTGGTAAGCAATTCCCTGGAGTGTCCAATCTCAAGCAGCACTTCACCATAAAGCACAAAAACGTTAGCAAGCATCCCTGCACGATTGCAAATTGCAAGATGATTTTTTCCACGCCGCACGCTCTTAAGAATCATGAATTGACGCACTCGAACATGATCTACAGTTGCAGTCTCTGCGAGAGACACTTTTTCCACAAGGGAGTGATTGAGAAGCACATCTTCAACGCCCACAGAGCAGTCTACCAGACAATCGGAGCCGAGAAGGAGAGTCTCTACAAGGAAACAGATTTGAGTACGTATGTCGTTAAAGGGGCGACTGGGACAGTCTGTCCGAGGTGTAAAATCAAGTATCCTAACATCAAGGctatgaaaattcattatttcaaattccatgAGGCGTTTGCTTAA
- Protein Sequence
- MIEVEELQGFESACRLCLTTDETRSSIFGAAHTLDPLVDKIKNCLSVQISQEDKLSTLICITCVNKVNQWHQYKESCLQSQEKLIQWLANQSIPIAVVTVKKEPVSQDFEENLPASNKDNNLEKPPEKEVLTTIQTTEIQIDQEKNTVEPDNLEEASKKDAVKVPEMDVDQGENEARESEVIESTPNISESANEIETRMEIEQEKETEVERETRGSSKRRLSKDSGNENKRLVTIPIKNEPQDEFEVDENLEIESTSGELLLNPLAMANNDKNDNVPEVAPIQKSPSSLKGKKKVRRGPHTHFRGARIFKRKCLHCQINLHSKNSYAKHMARFHSVVGKSVPQPTIEPESSQRNDLIEEAEELIEDVEEELENLGEDAPLTPVQQNIISQLKTFSCYSCEQSFQDRRSTLNHIRQHMPDLRSYTCVACLTEFSDRTSYKQHCEASFECAMKIALVVPIQGVEKYFTCNMCLRPMPNRKDLISHLSKHSDKQYEELMSPAKSPPKLTPMGPLPSSGPYGKGDPAYNHECDLCGMIYRYKPNMIKHRELCASLQPEGRTSYKCVDCGMTFLVFSKFHSHVTLEHKKKELKCPKCAAKFRSPSDYLTHHEFHRKKNDAKESAQKNWSQDFEKTEGENLHLQSKAKKFACSLCNLHFSSRAELTEHRNLHLKVKIYSCVICRSMFSSPGALEIHMKDHGIDDPTERTANSSCMEYGQEVEAGANPGTNNSGQNRKNECFDCGKTFSNLANLRRHVRNAHGEERRIDCTECARTFKNKESFDEHMRNAHNSSEKTVLTCPQCPKTFVFQANLDLHLRNAHVNKEKGSHECDICGKTFVEESSLKIHRGWHNRANSRFSLENYERDRPENSIPGSSKPAKARKSFPNSSPVQQQPLIELQCQVCDDKFVDVADLRKHVWDVHCARTTKPEKPFLQEDLQCELCTNVFPDQQSLEIHMEWHERNPILNSSGNYRCDICDKYYSSSKILWKHKKLHKVSQALKFQSLPMKKPTCNPCGRTFTAESSLKRHKAMSPECQTYFTGRGLADQELRSEDLAKKRPVTCHICKTVFPSMSVLYQHKQLVHKTNFRERKSSNEFVPLTSVEGVSCNVCGKQFPGVSNLKQHFTIKHKNVSKHPCTIANCKMIFSTPHALKNHELTHSNMIYSCSLCERHFFHKGVIEKHIFNAHRAVYQTIGAEKESLYKETDLSTYVVKGATGTVCPRCKIKYPNIKAMKIHYFKFHEAFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -