Epri100845.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010507087.1:6492-11248[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.3 7.8e+02 3.1 1.4 2 23 119 141 118 141 0.93 2 17 2e-05 0.0068 19.0 1.6 1 23 147 170 147 170 0.97 3 17 0.00049 0.17 14.6 0.2 1 22 397 418 397 420 0.90 4 17 0.00072 0.25 14.1 1.3 1 23 426 449 426 449 0.95 5 17 0.022 7.5 9.4 0.1 1 23 489 512 489 512 0.96 6 17 1.6e-06 0.00055 22.4 1.6 1 23 518 541 518 541 0.97 7 17 0.13 46 6.9 1.5 1 19 579 597 579 602 0.88 8 17 4.2e-05 0.014 17.9 1.5 1 23 608 631 608 631 0.97 9 17 0.00037 0.13 15.0 3.8 1 23 717 740 717 740 0.94 10 17 0.00015 0.052 16.2 2.6 1 23 746 769 746 769 0.95 11 17 0.024 8.3 9.3 0.9 1 23 783 806 783 806 0.90 12 17 3.8e-06 0.0013 21.2 2.4 1 23 812 835 812 835 0.97 13 17 0.0057 2 11.2 1.0 3 23 842 863 840 863 0.95 14 17 0.00064 0.22 14.2 1.1 1 23 868 891 868 891 0.97 15 17 0.0017 0.57 12.9 0.5 2 20 898 916 897 920 0.93 16 17 9.5e-05 0.033 16.8 3.1 1 23 926 948 926 948 0.97 17 17 1.4e-06 0.0005 22.6 1.2 1 23 954 976 954 976 0.98
Sequence Information
- Coding Sequence
- ATGATAAACAACGCAAATGGAGAAATTGAAGAATCGGATCCACTCTCACTCGACGACTTAAGACAAGTTTCGAAGAGTGAAGATATGCAACTATTATCTTATATTAAATCTGAACCAAGTTCTATAGATACGGCTTTATCttattctgatgaagaaattcCAACAAATATGGAAGTGCCAATGGAAAGAGAAGCTGGATCATTTCTGTCCTGGGTAGAAGTCAATGAGCACGCGAGTCTTCttgatagaaaaaatatattaatggaAACTCAACAGAATGCAACAGCACCAAAAGAGACAACAACAATAAGTTGTCAGAAGGGAGTAAATGTAATATACGGCCGGAACGACTTGActtgtaaaatttgttgttttcaaCTTGCCAACGCTAAAAGTCTGAAGGCCCATGTGATTCGTAAGCACACCCAGAAATCTTCGTTCCCTTGTACTGAGTGTGATAAAACTTACAAGCTTAAAACAGATCTCAACAGCCACTTGAAACGTACTCACAAGAAAGAGAAGTTAATAGAAACTGGGAAGATATCTACAGAATCCGAAGAAGTCGAGAAGACTGGAAAACCTGAAGAGACTCAAAGCAATGCAACAGAAGATCCACTAAATTCAAATGAAGCTGTTCCATCAAATGAAGCTGTTCCATCAAATGAAGCTGTTCCATCAAATGAAGCTGTTCCATCAAATGAAACTGTTCCATCAAATGAAGCTGTTCCATCAAGTGAAGCTGTTCCATCAAATGAAGCTGTTCCATCAAGTGAAGCTGTTCCATCttcttcaactaaaataaagaaACCATCAagGAAACTTTCAAGAGGACAAGAAGGAATTAATGTTATGAAATCTTCAACGGAAAAGAATTCTCtgtcaaaaacaacttttagcGTAGTTCcaacatttgttaaaataccAAACTTACTTTCATCACTTCTTCTTATGAACGTGAATCCTGATGAGGAAAACAATACAAATAGAGGAATTGAAGATTTGGATCCACTCTCACTCAACGACTTGAAAGCTGAAAACATATTAcctcaaattaaaattgaaccaaattcTACAAAAACTCCTTTATCTTGTTCTGTTGACATCATTCCAAGTAACATATCTCCAAAGAAGGAGGTATCAATAAAAAGAGAACCTGAATCACATTCCCTCCATGAAAGTAAAAACGAGTTTACTTGTAAAGAGTGCGGTCAAAAATTTCCCCGCATGGAAGGTTTaagaattcattttattgatGAACACTTAGacaacttcaatttttattgtgaaGAGTGTGGTAAGGAATATAAACTCGAGAAAGATTTCAAACAACACCTGAAAGATCAACATGGAGAAGACAAGACTTATCATAGAAAAAAAGAGTCAACCGAAACTCAGCAGACTTCAACAAAATCAACAGTATCAAATAAAACAGGAATTGTAGATTCACTGTCTGTCGAGCGCAAATTTGCTTGTAAGATTTGTAATGCTAGACTAGTAGACTTAAGAGGACTCAAGCTTCATATTATTCGTATGCACACTCAGGAATCTTCATTTCCTTGTAATGAGTGTGATAAAGCCTACAAGGTCAGGAAAGATCTTAACCATCACATGAGACGTGTTCACAAAACAGAAAAGTTTAATAGAAACTGGGAAACTGGGAATTCAAATGAAGCTCTTGCATCTCCTTCAACTGAATCCGAAAAGGAAAGAACACTATCGCAAAAACCGGCAAAGTTTATTTGCGAAACTTGTGGCATGAAATTCGTGTACAAGCAAGTTCTGGCTCAACACTGCATTCGTAAACACAcagacaaatttaatttcacttGTGAGAAATGTGGTAAAGAATTTAAACTAGAGAAAGATCTCAAAGAACACTTAAAGAACCGTCATCTAGAACAAAAGTTACCAAAAGTATTCTTTTGTGAAATTTGCGtcaagGGCGGCCTCACTAATCACATGAGTCGTTGTAATGTAGAAAAAGAGTTTAGCAAAACTCTagagaattcaagagaaaagaaaacaagACTAAGAGTTATGAAAACCGAAAAGAATGAAGCTCTGCCATCTTCTTCAACTGAAATCATCTCTCAATCAGATCCACTACCGAGCGAAAAGGAAAAAACACTGTCGCAAAAGCTAACAAAGTTTACTTGCGAGATTTGTGACAAAAGATTCGTGCACAAGCAATCTCTGAGTGAACACTTTACTCGGAAACACACAGacagatttaatttttgttgtaaagaATGTGGTAAGGAATTTAAGGTAGGTAGAGATCTCACAAAACACATAAAAGAGTTTCACCGAAGAGAATACTCATCAGGAAACGGGAATCCAGGAATATTTATCTGCAATATTTGTGGTATCAAAGTCTTGCGAAAAGACACTCTGAGAATCCATCATATTAGGAGACACTCCCAGCAATTTAATTATCCTTGCAAACATTGTggcaaaactttcaaaattcaggGAGATCTCACTACCCATACGAGGCTTCGTCACCTGGAACCATCTGTTATTTGTGAAATTTGTGGGAGAGAAATGAAGAACAAACACAGTCTTTACATCCATcagaaaaataatcatttccaAACTGAATTCGTGTGTCCCATCTGTAAAAAATGTATGGCCTCTCAAGAAAATCTCGATCAACATGTAAAGTCATATCATGCAGCGAAGGAAAGAGTTACTTGCGATGATTGTGGAAAAACTTTTGCGGCCAAATTAACCCTCAGAGATCACATTCTTTGTGTACACAGTGATCTCAAGTCGTTTTGTTGTGAGGTTTGCGGAAAATCGTTTGCTCGATATTTTCGATTGAGGCAGCATCTTCTCAGTCACACGAGTATTCGACCTTATGTCTGCGACTTATGTGGGAAACAATTTAAGCAGAAATCGAGTTTAGTTAGTCACAGGAAACTTCATCCTGGTGAACATCCTCCTCTGCCTATTATTCGATTGGATACTCTCCTGGGTGACTTTAATCAAATATCAGGACAGAAGTAA
- Protein Sequence
- MINNANGEIEESDPLSLDDLRQVSKSEDMQLLSYIKSEPSSIDTALSYSDEEIPTNMEVPMEREAGSFLSWVEVNEHASLLDRKNILMETQQNATAPKETTTISCQKGVNVIYGRNDLTCKICCFQLANAKSLKAHVIRKHTQKSSFPCTECDKTYKLKTDLNSHLKRTHKKEKLIETGKISTESEEVEKTGKPEETQSNATEDPLNSNEAVPSNEAVPSNEAVPSNEAVPSNETVPSNEAVPSSEAVPSNEAVPSSEAVPSSSTKIKKPSRKLSRGQEGINVMKSSTEKNSLSKTTFSVVPTFVKIPNLLSSLLLMNVNPDEENNTNRGIEDLDPLSLNDLKAENILPQIKIEPNSTKTPLSCSVDIIPSNISPKKEVSIKREPESHSLHESKNEFTCKECGQKFPRMEGLRIHFIDEHLDNFNFYCEECGKEYKLEKDFKQHLKDQHGEDKTYHRKKESTETQQTSTKSTVSNKTGIVDSLSVERKFACKICNARLVDLRGLKLHIIRMHTQESSFPCNECDKAYKVRKDLNHHMRRVHKTEKFNRNWETGNSNEALASPSTESEKERTLSQKPAKFICETCGMKFVYKQVLAQHCIRKHTDKFNFTCEKCGKEFKLEKDLKEHLKNRHLEQKLPKVFFCEICVKGGLTNHMSRCNVEKEFSKTLENSREKKTRLRVMKTEKNEALPSSSTEIISQSDPLPSEKEKTLSQKLTKFTCEICDKRFVHKQSLSEHFTRKHTDRFNFCCKECGKEFKVGRDLTKHIKEFHRREYSSGNGNPGIFICNICGIKVLRKDTLRIHHIRRHSQQFNYPCKHCGKTFKIQGDLTTHTRLRHLEPSVICEICGREMKNKHSLYIHQKNNHFQTEFVCPICKKCMASQENLDQHVKSYHAAKERVTCDDCGKTFAAKLTLRDHILCVHSDLKSFCCEVCGKSFARYFRLRQHLLSHTSIRPYVCDLCGKQFKQKSSLVSHRKLHPGEHPPLPIIRLDTLLGDFNQISGQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -