Epri000607.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010000076.1:56577-61195[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.26 90 6.0 1.8 1 23 416 438 416 438 0.97 2 19 0.033 11 8.8 0.6 2 23 491 512 490 512 0.95 3 19 0.00016 0.054 16.1 3.2 1 23 570 592 570 592 0.97 4 19 0.023 8 9.3 0.6 2 23 596 617 595 617 0.95 5 19 7.1e-05 0.024 17.2 1.7 2 23 652 673 651 673 0.97 6 19 1.3e-05 0.0045 19.6 1.2 1 23 678 700 678 700 0.94 7 19 0.00067 0.23 14.2 0.8 1 21 706 726 706 730 0.92 8 19 0.00056 0.19 14.4 3.5 2 23 798 819 797 819 0.95 9 19 4.6e-05 0.016 17.8 3.8 1 23 868 890 868 890 0.97 10 19 0.00032 0.11 15.2 0.7 1 20 895 914 895 916 0.94 11 19 0.054 19 8.2 0.3 2 23 927 948 927 948 0.97 12 19 3.3e-05 0.011 18.3 0.6 2 23 987 1008 986 1008 0.97 13 19 3e-05 0.01 18.4 1.6 1 23 1013 1035 1013 1035 0.95 14 19 0.00018 0.061 16.0 2.8 1 23 1041 1063 1041 1063 0.98 15 19 5.3e-06 0.0018 20.8 0.4 1 23 1079 1101 1079 1101 0.95 16 19 4.3e-07 0.00015 24.2 0.6 1 23 1107 1129 1107 1129 0.99 17 19 0.00021 0.073 15.7 0.2 1 23 1135 1157 1135 1157 0.97 18 19 0.00088 0.3 13.8 4.2 1 23 1163 1185 1163 1185 0.96 19 19 0.012 4.2 10.2 0.4 1 20 1191 1210 1191 1212 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTTGAGATAAATACGTCGGAGTCACCGCAAAATGAAGAGGGAATCGTATCTGCGATGGAAATATGTCGAGTGTGTCTGCTTGGAAACGTTTTGATGCGAGACCTCTTCCTCGACAGCGAGGTCACATCTTTATCTGCTAAGGCCATGAGCTTCGCCAGCGTTAAGatGATGCCAGGTGATGGTCTGCCAGGACAAGTTTGCTGTGTTTGCGCAGATAAACTGGAATCAGCGTATGATTTTAAACTACAAGTCGAGCAAGCCGACAGTGTCCTCAGAGAAAAGTTTGATACACTTAATATTAAAGAAGAGTTGTTTTTCAATGACGTGGAAGTTCATTTGGAAGGAGAGAGATCTCGCACGAGACGTGAAATAAATGACAATGGTGAATACGTGGATGCACCGGAATCACTACACGATGTTGGTAGAGATACTCTTTTGAAGGACCATCTAGCACTTTTACAAGTTCAGAAAATGGCTGAACAAGAAAACATGTTGCAACacgGTGTAGAGCACTTGCAAGAGCATCTTCAGGAAGAATTACAGGACGAGCAACTGCACGAGGAACATTTGCAAGAGGACTTgcaagaggaagaggaagaacaTTTGCAAGAAGAACACCTACAGGAGGAACATTTACAAGAAGAGCACCTGCAGGAAGAACATTTGCAAGAGGAACACCTTCAGGAGGAACATTTGCAAGAAGAACATTTACAAGAGCACTTGCAAGAGGAACACTTACAGGAAGAAGATTTACAAGAAAATGATATAGAGGGTCTCGTTAAGCAACCTAATGAACTTCTGCAGTTACAACAGATTTCCGAATCTGTGCACCATTTTGCCGACAATAGCGATATCAAGGATGAAGGACTCCATGAAGTGGAATCTGTAAGCATCCAGGATCAAAGTTACATTGATCAACAGGAATGCTCTCAGATGAGCGACAACGATTTTAATAATGAAGAAACTTTCGCAGATACTCAAGAGTCCATGGAGTACTCTTCGTCTTCAACGAAAGAAAGAGAAACCGAACAAGACCAGCAATCCACTTCCGTCGAGCAAATGGATCTCACCTCGGAACAAGAATCACCCCAGAACGAAACTCGCAGAAGTAAACGCAGAATTGCTCGTCGATCAACCGCCTCCAATCATAACTCCGACGAAGAGAATTACTTCGAGAATTTAAATCTCAGCTCTCGCCTGAAGAAGACTCAGATTGACAAATCAGAGAAGGTTTTCTTCATGTGCTACCTCTGTGACAAGGAGTTCCTCTCAAAGGGAATTTTAAAGGAACACATGCACTCGCACGAGGAAGTAAGGAGAACCCTTTCCTTGAAGAAAATAGGGGACAAACCACAAAAAGCAGTCACTCAACAAAAAACAACAGCTTCACAGAAAGCAACCTCGACATCTCAGAAAATAGTTTCGCCACCCAAAATGCCACCCTCGGGAAAGAAGCCGAACAAATGCCCTTACTGTGGAAAGGAGTACCTTTATATAATTTCCTTCAACAAGCATCTGAAGCAGCACGAGAAAGAAAAAGGCGCGGTGAAGAACGAATCAATGCCGTTCGAAGTTGTCTTCCAGGAAGATGATGATTCGTTCGACTTCTCTGGGTATGCTAACTCTTCTGGTTCTAATGACGCAAACACAGGGAACATCGACTCTTCAGATTCGAACGAcgaagaaaaagaggaagagcATCAATGTAAGAAATGTCCAGAGAAATTTAACACGAGGCGAGCGCTTCGAAAGCATGCGATTAAACACATAAGTTTGAAATGCTCCGTTTGCGAGCAGCAATTTGACTCCATGGAAAAGTTGAAGGACCACCGTATTCAGCACGTGACTGAAGGTGTTTTAACAGAGGAAGATTTGAAGAAATACTCCGAGGACTTTGAAGATTTCGAGGGAGACGAGGCGGAAGATGGAAAGAAAGGCGAATTGAAATGCCCACACTGTCCGATGATTTACACCTATAAAAAGTCTCTCTCCAGACATCTAGAGACTCATTCCGGAAACAAGTACAGTTGCAAAGTTTGTGGACAAGAATTCTCCAAAAAGGATCAGTTACAAAGACACTCGGAGCAGCACGGTAGAATTAAGTCTTTCAAATGCACTCAGTGCAATAAAACCTTCGGCAATGAACTCACGTTACGTAATCACTTGATAGCGACAAGTCACAAGACAATTTTGCACGGTCAAGAGTACGACCCGAACAAGAGGATTAAGCGAGTTGCCGCAAAGGCCGCACAGAAGATCATCGACAAGATTAAAATCGAGGACGAAAGTGATTATGAAGAAGAAAGCAGTAGAAACAAGGACGCCAACTATCGTGAAGATTCAAAAACTCCAAGTAAGAGAGCTTACAATAAAAAAGTTCTCGAGTGTGCGACctgcaataaaaaatgcagCTCCAAGCAATCCCTGACGAAGCACATGGAGCAGCACGTGAAGGATGAAAAAGGGGTGAAGGAGAAGGTAGAGAAGATGAAACAAGAGAGGAAAGATCCTGATAGGTCGCTAGACGACGATGACGACGACGACGATCGAGATGATGATTTCGAAAGCGGTCTCGATTGGCCCATGGACAATCACGAGTGTCCCACCTGTAAGAAGAGATACAGCACCAAGAAATCTTTATTGAGGCACCAACTTTTACACGAAGAGCCAAACTTCGAGTGCGACATCTGCAACGTCAAGTTCTACCGCAAAGATAAACTCAAAGCCCACTACGACAAATGTTCAGAGAAAAATCCGGATCAGGTGCGAAAGTGCAACATATGTGGGGACAGTTTCGAGAATAACGAAATCCTGCGAGAGCATCGGGCGAAGCACGTGACGGAGGGAATTTTGACTGAGGAGGATTTGAGggagatcgagcccaggcctgAGGAGAGGAAATCTGGCGAGAAGATTCCGAGGAAGAGAAGAACAGACATTGTTGGCCTTGAGTGTACCGAATGCAATAAACAATACACATCACGTAAGGGACTTTTGCGCCATATCCAAGTCCACGAAGGGAAGAAGTATCTCTGCGATATCTGTCCGAAGAAGTTCTACAGAAGAGAACACCTGAAGATTCACGTAGCCAAGCATAACATGATCAAGCCTTATAAATGCTCTCGTTGCACGAAGCGTTTTATCAAAGAAGAACAATTGACGAACCACCTTTCTAAACACGACAGGACTTTCAAGAAGAACAAGGAAACAGACAGTTCGAAGAGGTTCCTCTGCGAGATCTGCTCTAAGAGCTTCACTCAATCCACAACCTTGATTGCTCATCTGAGAGCACACAATGGAATAAAGCCTTATGTCTGCGAAGTCTGCTCGAGACCATTCACGACGAATGCTTATCTGAAGATGCACATGAGAACTCACACGCAAGAGAGACCTTATATTTGTCAGTTCTGTTCGAGGGCTTTTGCGAGAGCTGATACCTTGGCTAATCATCTGACTTCTCACACTGGAGAGGCCAAGTACCACTGCAAGTTCTGTCCGAAGAACTTCAGGAGATTGAAGTCGTTGAAGGAACACGTTTTTATTCATACGGGACAGAGACCTTATGCTTGTCCGACTTGTGATCgcagatttaataataatggaagTAGATATGCACATAGCAAGAGGTGCAAGCAGAATATGCTACAGAATCAGACCCGGGCTCAGCTGATTTCTCAACCACCACCACCTCTACAGCAGATGCAACATCAGAGGATACACCAAAGCATTGTTCAGGCACCAATGATTAAGTCCCAGAATATTAAAACTATCACGATTGCCAGACAGGCAGAACCCATGACGGCTCAACATGTTTTACAGCATCAGGAAATTTTGATGCCGCTCATTTTGCCCTTGACTGTGACCCTTTCCGATGTGGGTGAGGAAGTTATTCTACCGGAAGGTACCAAAATCTTCACTACGTCTTAA
- Protein Sequence
- MDAVEINTSESPQNEEGIVSAMEICRVCLLGNVLMRDLFLDSEVTSLSAKAMSFASVKMMPGDGLPGQVCCVCADKLESAYDFKLQVEQADSVLREKFDTLNIKEELFFNDVEVHLEGERSRTRREINDNGEYVDAPESLHDVGRDTLLKDHLALLQVQKMAEQENMLQHGVEHLQEHLQEELQDEQLHEEHLQEDLQEEEEEHLQEEHLQEEHLQEEHLQEEHLQEEHLQEEHLQEEHLQEHLQEEHLQEEDLQENDIEGLVKQPNELLQLQQISESVHHFADNSDIKDEGLHEVESVSIQDQSYIDQQECSQMSDNDFNNEETFADTQESMEYSSSSTKERETEQDQQSTSVEQMDLTSEQESPQNETRRSKRRIARRSTASNHNSDEENYFENLNLSSRLKKTQIDKSEKVFFMCYLCDKEFLSKGILKEHMHSHEEVRRTLSLKKIGDKPQKAVTQQKTTASQKATSTSQKIVSPPKMPPSGKKPNKCPYCGKEYLYIISFNKHLKQHEKEKGAVKNESMPFEVVFQEDDDSFDFSGYANSSGSNDANTGNIDSSDSNDEEKEEEHQCKKCPEKFNTRRALRKHAIKHISLKCSVCEQQFDSMEKLKDHRIQHVTEGVLTEEDLKKYSEDFEDFEGDEAEDGKKGELKCPHCPMIYTYKKSLSRHLETHSGNKYSCKVCGQEFSKKDQLQRHSEQHGRIKSFKCTQCNKTFGNELTLRNHLIATSHKTILHGQEYDPNKRIKRVAAKAAQKIIDKIKIEDESDYEEESSRNKDANYREDSKTPSKRAYNKKVLECATCNKKCSSKQSLTKHMEQHVKDEKGVKEKVEKMKQERKDPDRSLDDDDDDDDRDDDFESGLDWPMDNHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERKSGEKIPRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQTRAQLISQPPPPLQQMQHQRIHQSIVQAPMIKSQNIKTITIARQAEPMTAQHVLQHQEILMPLILPLTVTLSDVGEEVILPEGTKIFTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980354;
- 90% Identity
- -
- 80% Identity
- -