Basic Information

Gene Symbol
ZNF236
Assembly
GCA_037177015.1
Location
JBAGKK010031237.1:8525-16733[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00011 0.037 16.7 2.9 2 23 53 74 53 74 0.98
2 24 4.7e-07 0.00016 24.1 2.1 1 23 95 117 95 117 0.99
3 24 3.4e-06 0.0012 21.4 2.0 1 23 123 145 123 145 0.98
4 24 1.7e-05 0.0058 19.2 0.8 1 23 151 174 151 174 0.96
5 24 0.0087 3 10.7 2.0 3 23 185 206 183 206 0.97
6 24 5.7e-07 0.0002 23.8 1.2 1 23 316 338 316 338 0.98
7 24 4.4e-05 0.015 17.9 1.9 1 23 344 366 344 366 0.99
8 24 4e-06 0.0014 21.2 0.2 1 23 372 394 372 394 0.97
9 24 0.00037 0.13 15.0 5.6 1 21 398 418 398 420 0.95
10 24 0.0081 2.8 10.8 8.3 1 23 475 497 475 497 0.98
11 24 5.5e-05 0.019 17.6 5.3 1 23 503 525 503 525 0.99
12 24 0.00064 0.22 14.2 5.0 1 23 531 553 531 553 0.97
13 24 0.00082 0.28 13.9 7.9 1 23 559 581 559 581 0.98
14 24 0.00023 0.08 15.6 0.2 1 23 906 928 906 928 0.97
15 24 0.015 5 10.0 1.5 2 23 951 972 950 972 0.97
16 24 0.00029 0.1 15.3 2.5 1 23 978 1000 978 1000 0.98
17 24 0.053 18 8.2 0.1 1 23 1006 1028 1006 1028 0.96
18 24 2.9e-07 0.0001 24.8 2.6 2 23 1101 1122 1100 1122 0.98
19 24 0.23 80 6.2 5.4 1 23 1128 1150 1128 1150 0.95
20 24 3.5e-05 0.012 18.2 2.3 1 23 1156 1178 1156 1178 0.98
21 24 5.3e-05 0.018 17.6 1.9 1 23 1184 1206 1184 1206 0.98
22 24 2.5e-06 0.00084 21.8 2.5 2 23 1427 1448 1427 1448 0.97
23 24 5.1e-06 0.0017 20.8 3.0 1 23 1454 1476 1454 1476 0.98
24 24 6.8e-07 0.00023 23.6 1.8 1 23 1482 1505 1482 1505 0.96

Sequence Information

Coding Sequence
ATGACACTCACCGCAGATTGTCTGAATTTTGCTCTTATGATCATCTGCTCTCGAGTTTTTCATTTTGGTCTCGGTCTTGGTGCTCAATATTATAAGGCTCAACTCGACGCTCATCTGAAACTCCACAACGAAAAATGGACGACCGACGATATCAGGAAGTGCAAGCTATGCCACAAGCAATTTACTCAGCCAGCTTTATACAGACAACATATCCGAGAACATTACAGGTTGCAGACGAAGCTGGTGAAGCAGACGAGAAGGGGAACGAGACACAAGACGATGTACAAGTGCAAGATATGTTTCAAAACCTTCCAAAAACCGAGCCAACTGATGCGACACATCAGGGTGCACACAGGCGACAAACCATTCAAGTGTACGATTTGTAGCAGAAAGTTCACGCAGAAGGGGTCACTTCAAATTCACATGTCCCAACACGATGGACTCAGGCCGCATCCTTGTAATTTCTGCAATGCGAGATTCAGTCAAAAGGgAAACCTAAACGCCCACATCCTTAGGGTGCACAATTTACCGGATGAAGCGTCGATATTTGGATGCGCTTATTGTACATGCGCCTTCAAAAAACTAGGAAGTTTAAATGCACATTTAAAGAGAAGACACGCTCTTCCTATTGAGGAAGAAAATCCGAAATGTGATAGTTCTACATCAGATGCAGACATGCAAGCAACCGTGAAAAATGTCATGTCACAGCTTGCCTCTCTCGAATCAGAGGTACAAAATCAGGCAGATTCAACTGCAAACGATAACAATGATATCTTGCAACAGGCTCTGCAAAATAGCGGACTGCCAAGCAAAGAAAAACAAGCGGaaatagatAAAAAAGCTAAGGGTAAAACGATGATGGTGACTTTACTAGACAGAACTTCGGATGACGATGCAAGaaaatatgtgaCAATCAAGCAACGACACGTAGGCGATATGTTATGGTTCACTTGTACCTTTTGCCAGAAGGAGTTTAAAAAGCCATCGGATCTCATAAGACATATACGAATTCATACACAGGAGAAACCGTTTAAATGCTCATACTGCAGTCGCTCTTTCGCCTTAAAATCAACAATGACTGCTCACGAACGCACGCACTCTATCTTGAAGAAATTTCCCTGTGGATCCTGCGACAAAGTATTTCCAACTCGAAGTAGTCTTACGGCTCATACTAGGTTACACACAAGATCTTTCTCATGCAGCGTTTGCAACAAATGTTTCAGTGGAAGTTCCTTATTAAAAAGTCACATAAGGTGCCATTCAAAACCTAAGACGAAATTGTCTCCGGAAGCAGAGAGCCTTGTACCCCAAATAGTTTTGGAAGAGCCACTGCTTATCAGCGACGCGGGAAATAAAATTAGCGTCGCTCATGTAAAATCGAAAAAGCAGCAGGTTTACGAAGATGGAGATTCAGCCAGACCCCATAAATGTACGATGTGCACTGCCGCGTTTAGGAAAATCAGCCATTTAAAGCAACATCACCGAAGGCACACGGGAGAAAAACCTTACAAGTGCCAGAAATGTGACAGGAAATTCACTTCGAACAGCGTTCTAAAGACGCATTTGCACACTCACGAGGATTTGAGACCGCACAGTTGTTCAGTCTGCAATGCCAAATTTACAACGCATAGTAGCATGAAGAGACATCTCATTACACATAGCAATAAAAGGCCTTTTATGTGTCCATACTGTCACAAAACATTCAAAACCTTCGTTAACTGCAAAAAGCACATGAAAATACACAAAACTGAATTGGCTCAACAGCAAGTGGAGCAGCAGAAATTACAACCAAAAGTTATAACTATTATGGATAATCCTAAAGAAACTGACGTAAATAAGGAAAAAGAATTCTTGGTGCCTGAAACTCTTGCCTTAGGGGATGAAATAACTGTGCCATTTGAGACTCAGACTGTTAATTTTACTACAAACCTTACTGAACAGTATGAACCCATTGTGGAGCAGAATAAAGACAAATTGCCAATACCAATTTCTGCCTCAGAAAGCATCGTAAATCaAAACGTTCTGAATGTAAGTAGTGCTAATTTAGGAGTTACACAGACCTTACACGCCGATGAAACGGGCACGATTACTCTGCCAAATTATTCTGGAGAACAGACACTTACTGCTgaGAGCATACGGGAAATAGAAGAAACCCTGAACCAACAGCTCTTTAATATCGGAATGAACCTCGGAATAGGAGATCCAATACCGAAACAAGAGACACAAACAAATTCCGCTTCCCTCGACTCCAGAAATCAACCTGTCctcaatattatttatgataCGAATAAAGCCTTGGATTCTGCCACCAATAATGTCAATTCTCAGATATTCACGCCGCAGTTTGATACTTTCGACATGAGTCAAATCGGCTTACACgccAATGGAGTCATGGATGTTGGAATCGAATCAGACACGACGACAAACATGACGAGTATGTTGTCTAGATCCGTTCAAGAGGAACAACATTTGCCTATTCCAGTGACGACTGAGTCTGTCGATATTGATCAGGCGAAACCTCTTAAGCATTTAATAGTCGTTAGTTCAAAGCAAACTCGGGCTGAACTTTCGAAACCGGTTCAAGCTCacaaaaagaattcgaaaattattgCCAAGGCTGACACGACTAATGCAACTGAAGTTCAGACTGTGAAAGATGAGCTGAAAACAGAAGATAGGACTGTCGAGATTTCTGGAGATTTCGATGAATATTTGTTTCCaTGCACAATATGTGACAAGTATTTAGAGAAGCAATCCGATTTAGTGCGTCACCTACAGGAGCACATGAATTCAGCAGCGAAATATCCTGTGGTCGATAGAACTAATTCAGTTGAGATTACTCCTTTGCTGCAGTGTCATATGTGCAGGAAAAACGGTTTCACAGCTCCGGAGTTGAAGgaaCATTTAAAAACTCATCAGGGTTCGAAGGAATTCGAATGCATGGAATGTTCTCAAAAATTCTGTACAAATGGTGGATTGAGCagacatttaaaaatgcacgCCGCTAAACAGCAATACCAATGTAACATATGCCTGAAAGTATTACCGAATAAAGTACAAATGGATTTACATCTTCTAGACCATGAAGAATATTTCAGAACTGGTGTAGCAGAAGCAGATAGTTCCGAAAAGGAATCTCTTCCTCTAGAAAGCAAATTTAAGGAACTTCCTGCCGATAAAAATCCTATCATTGTGGACGCGAAAATGTCTGAGCAAATTTTGTTGGATTCTGCAGAGATTATGGAAAGACTCAAGCAACAGAAGATGGAGGGTAAAGAGGAAAAGAAACCAGAGAAGAATAAATGCAAATTCTGCCCGAAAACGTTCCGAAAACCTAGTGATCTTACCAGACATCTTCGAACTCACACGGGCGAGAAACCTTTCAAATGTCCATTTTGCAGCAAGAGTTTTGCAGTTAAGTGCACACTTGATTGTCATTTGAAAGTTCACAGTGGGCAGAAAACTTTCAGTTGTCATGTGTGCAATAGTTTCTTCGCGACAAAGGGAAGTCTAAAAGTTCACATGAGACTTCACACTGGTTCTAAACCCTTCAGATGTCCAATTTGCGACATGCGATTTAGGACTTCAGGTCATCGAAAAGTTCATCTCCTATCTCATGTCAAGGAACATAAAGAGAATCAACCTCGCAAACGAAAGCAACGAAAAACCGCGGCAATAGCGAGCGTCGTCGCCGATGTTGAAAACGCCATTGAGTCCATCGCCAACGAAAACACTGCTCAAGATGCTCCACAAGAGCAAGAGGAAACTGAATATTCGAACATAGACACAGTTACCATCGATGCTTCTGCTCTGGACGGTGCAATCAATTACAACCCAGATGGAACCATTTTAAACAACAATTCTGTGCTCTCTATTAGCGAAAACAATGATCTCGTAGCCAGTTTGCATTTCCTTCTTGCCAATGGTCTCGTGACAATCCAACCGGATTCATTTTTAGCGTTCCAGGACTCCACTCTTCCTGGATTAACTAATCTACAATTAGAGAACTCCCAAGGAGAACTTGTTGAATCCGGTAATTGTGAAAATGTTATAATCACCCAGGAACCGAATTCTCTCGACTTCGAACAATCAGGATTGTTGAACATGGCAGTTTTACAAGTTGGAGACAACAGCAATTTTCCGAATTCTAATATTCCGACCTCTAATATTTCCAATTCCAGTATTCCGAATTCTACGACGACGAATTCCAATATTTACAGTTTTAGTAAATTAGGAACCAGTGGGCTTAGAAATTCGAAGAATGGATCAGTGAGAAGAGAGTGCGAATATTGCGGAAAGACGTTTTCGAAACCGTGTCAGTTGGAAAGACACAAAAGGATTCACACGGGcgataggccctttaaatgtgaAATTTGTGACAAGGCCTTTACACAGAAAAATACTCTGATAATGCACCAGAAGCATCACACGGGCGATCGTCCTCACAATTGTCCATACTGTCCTTATTCCTTTTCTCAAAAGGGAAATCTACAAACTCATCTTAAACGAGCGCATCAATTCGATACCCTTGAGGGGAAGAAACTATGGAAAGAGTCGCCATCGAAATTCGTGCAGGAAAGCACAGTTGACACGAGACTTCTGGGTCTAGATGATATCTCGTTCGTcgattatttatag
Protein Sequence
MTLTADCLNFALMIICSRVFHFGLGLGAQYYKAQLDAHLKLHNEKWTTDDIRKCKLCHKQFTQPALYRQHIREHYRLQTKLVKQTRRGTRHKTMYKCKICFKTFQKPSQLMRHIRVHTGDKPFKCTICSRKFTQKGSLQIHMSQHDGLRPHPCNFCNARFSQKGNLNAHILRVHNLPDEASIFGCAYCTCAFKKLGSLNAHLKRRHALPIEEENPKCDSSTSDADMQATVKNVMSQLASLESEVQNQADSTANDNNDILQQALQNSGLPSKEKQAEIDKKAKGKTMMVTLLDRTSDDDARKYVTIKQRHVGDMLWFTCTFCQKEFKKPSDLIRHIRIHTQEKPFKCSYCSRSFALKSTMTAHERTHSILKKFPCGSCDKVFPTRSSLTAHTRLHTRSFSCSVCNKCFSGSSLLKSHIRCHSKPKTKLSPEAESLVPQIVLEEPLLISDAGNKISVAHVKSKKQQVYEDGDSARPHKCTMCTAAFRKISHLKQHHRRHTGEKPYKCQKCDRKFTSNSVLKTHLHTHEDLRPHSCSVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTFVNCKKHMKIHKTELAQQQVEQQKLQPKVITIMDNPKETDVNKEKEFLVPETLALGDEITVPFETQTVNFTTNLTEQYEPIVEQNKDKLPIPISASESIVNQNVLNVSSANLGVTQTLHADETGTITLPNYSGEQTLTAESIREIEETLNQQLFNIGMNLGIGDPIPKQETQTNSASLDSRNQPVLNIIYDTNKALDSATNNVNSQIFTPQFDTFDMSQIGLHANGVMDVGIESDTTTNMTSMLSRSVQEEQHLPIPVTTESVDIDQAKPLKHLIVVSSKQTRAELSKPVQAHKKNSKIIAKADTTNATEVQTVKDELKTEDRTVEISGDFDEYLFPCTICDKYLEKQSDLVRHLQEHMNSAAKYPVVDRTNSVEITPLLQCHMCRKNGFTAPELKEHLKTHQGSKEFECMECSQKFCTNGGLSRHLKMHAAKQQYQCNICLKVLPNKVQMDLHLLDHEEYFRTGVAEADSSEKESLPLESKFKELPADKNPIIVDAKMSEQILLDSAEIMERLKQQKMEGKEEKKPEKNKCKFCPKTFRKPSDLTRHLRTHTGEKPFKCPFCSKSFAVKCTLDCHLKVHSGQKTFSCHVCNSFFATKGSLKVHMRLHTGSKPFRCPICDMRFRTSGHRKVHLLSHVKEHKENQPRKRKQRKTAAIASVVADVENAIESIANENTAQDAPQEQEETEYSNIDTVTIDASALDGAINYNPDGTILNNNSVLSISENNDLVASLHFLLANGLVTIQPDSFLAFQDSTLPGLTNLQLENSQGELVESGNCENVIITQEPNSLDFEQSGLLNMAVLQVGDNSNFPNSNIPTSNISNSSIPNSTTTNSNIYSFSKLGTSGLRNSKNGSVRRECEYCGKTFSKPCQLERHKRIHTGDRPFKCEICDKAFTQKNTLIMHQKHHTGDRPHNCPYCPYSFSQKGNLQTHLKRAHQFDTLEGKKLWKESPSKFVQESTVDTRLLGLDDISFVDYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-