Epri055050.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- -
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010234752.1:4922-17196[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.025 8.6 9.2 1.3 1 23 12 35 12 35 0.97 2 31 0.00034 0.12 15.1 1.5 2 23 42 64 41 64 0.94 3 31 5.9e-05 0.02 17.5 1.8 2 23 70 92 70 92 0.96 4 31 0.002 0.69 12.7 0.4 1 23 97 120 97 120 0.97 5 31 4.9e-06 0.0017 20.9 0.1 3 23 128 149 126 149 0.92 6 31 1.2e-06 0.00041 22.8 1.7 1 23 155 177 155 177 0.97 7 31 5.2e-05 0.018 17.6 0.2 1 23 183 205 183 205 0.97 8 31 1.5e-05 0.0052 19.4 2.2 1 23 362 384 362 385 0.96 9 31 0.00013 0.046 16.4 0.3 2 23 391 413 390 413 0.95 10 31 0.0032 1.1 12.0 0.5 1 23 418 441 418 441 0.95 11 31 6.4e-07 0.00022 23.7 1.3 2 23 448 470 447 470 0.93 12 31 9.7e-06 0.0033 20.0 6.0 1 23 476 498 476 498 0.97 13 31 1.4e-05 0.0048 19.5 0.1 1 23 504 526 504 526 0.98 14 31 3 1e+03 2.7 0.2 1 23 653 676 653 676 0.81 15 31 4e-07 0.00014 24.3 1.3 1 23 682 704 682 704 0.97 16 31 0.00046 0.16 14.7 0.4 3 23 711 732 710 732 0.95 17 31 0.078 27 7.7 1.4 1 23 737 760 737 760 0.95 18 31 1.1e-06 0.00037 22.9 0.3 3 23 768 789 766 789 0.92 19 31 1.2e-06 0.00041 22.8 1.1 1 23 795 817 795 817 0.97 20 31 4.4e-05 0.015 17.9 0.3 1 23 823 845 823 845 0.98 21 31 5.4e-05 0.019 17.6 0.1 3 23 910 931 908 931 0.93 22 31 8.7e-05 0.03 17.0 2.2 1 20 937 956 937 958 0.94 23 31 3.6e-05 0.012 18.2 2.4 3 23 1044 1065 1042 1065 0.93 24 31 6e-05 0.021 17.5 1.2 1 23 1071 1094 1071 1094 0.96 25 31 0.035 12 8.8 0.9 1 23 1181 1204 1181 1204 0.90 26 31 1.2e-05 0.0041 19.7 2.0 1 23 1210 1233 1210 1233 0.97 27 31 1.3 4.4e+02 3.9 2.7 3 23 1240 1260 1238 1260 0.94 28 31 0.0029 1 12.2 0.3 1 23 1265 1288 1265 1288 0.97 29 31 0.00022 0.077 15.7 1.1 2 20 1295 1313 1294 1317 0.94 30 31 5.1e-05 0.018 17.7 3.4 1 23 1323 1345 1323 1345 0.98 31 31 0.0036 1.2 11.9 0.2 5 23 1355 1373 1354 1373 0.95
Sequence Information
- Coding Sequence
- ATGTCCAAGACTCTcaaaaaaggaggaaagaaTTACAAATGCGATATCTGCGAACTTAACTTCGATTACAAAAACAAATACGATATGCACATCCTTCGTAAACAcacagaggaaaaaaaattatcttgcaATTACTGTGGAAAGAAGTACAAAATACGAAACGATTTAAGGAATCATGTGAGGTTTTATCACGAATCGAAAGCTGAAGTTTGTGAAATCTGTGGAAAGACCTGTTCCAATGCTAATTCTTTGTACACTCATCAAAAAAGGTTACACAACAGGCCAAAGTTTGAATGTCCACTCTGCCATCGAGCGATGGTTACTCAAGAAAATCTGGATCAACATTTACTGACTCAACATGAACAAAAGGAAAAGGTCATTTGTGAAGAGTGTGGCAAATCGTTTACTAAGAAATCTGCTCTCAGATTACATATCACAGCAGTTCACAGAAAACTCAAGTTGCATTCTTGTCAAATCTGCGAAAAGTCCTTCGCTCGTCAATCACAATTGAGGCAACATCTCCTCATTCACACTGGAAAGCGTCTCTTTATCTGTGACATATGTGGTCAACAATTCACCCAAAAACCTGGTCTTATCACTCACAGAAAACTTCACCCGGGTGATCATCCCCCACTGCCTATTATTCGATTAGATAATGCTCTTAGTGAGTTTATCAAAAAATTCTCCAAACGAAAACAACAGCCTCCTACGAAGTCTAAATCTCGTCTTCAACTGAGAAAGGATATCTTCAACTCTTTGAAGAATATAAACTTCATCCAGGCTCTAAATCAAGAGACTCAAGAGAAAccacccaaaaaaattaaagttactcAAGAGAAAATAcccaagaaaaagaaaatcactGCTCCTTCATCAGCAAAAACTTCTAAAGGCAATCCTGATCAACCAGCTCCAAagcgaagaagaagaagaaagaaggatTCGAATGATCCTTCTGCAGAGGACAATGATGGAATCCCTAAAGGGAAAGCCGAATTTATTTGTGCAGTGTGCAACAACGTGTTTTTAAAGAAGGAAATACTTCAGGCTCATTTTATACGAAAGCACACCGAGGGATACAATTTTACTTGTGAAGAATGTGGTAAACAGTTCAAAATCAAAGGTGATCTCACAACTCACACGAGACTTCATCATACGGAACCACCGACTGTTTGTGACGTTTGTGGCAAAACTTACAAGAACAGTCTTTCTCTCTACGTTCACCAAAAATACGCTCACTATAAAGCCAGATTTGAGTGTCCAATTTGTAAGCGATGTATGGTTActcaagaaaatcttgatcaaCATACAGCTGTGATGCACGTAGAACATGAGAGACTAGTTTGCCACGAATGTGGtaaaagtttttccaaaaaagtcaATCTTCGACGTCATGTTTTGAACATTCATACTAATATTAAGTCATTCAGTTGCCCAGTATGCAAGAAGTGTTTTTCTCAAAGATATCATTTGAGGCAACATCTACTTCTTCACACGGGAAAACGTCTTTTTGTTTGTGACATTTGTGGAAAGCAATTTGCTCAAAAGCCAGGACTTTTAAGCCACAGGAAAATTCATCCTGGTGAACATCCTCCTCTGCCTATAATTCGATTGGATCATGTTCTTAAAGATTTGTTAAACAAGAAATCTCGAAAAGGAGAGGAAGTGAAGCATCGAAAGGTTTCAAAGTCCAGATCTCGTTTAACACTGAAGAAGATTATCTTTAAATCGATTGGAAGTGTGAGCACCCAGCCGagaataattaaagaaataaatttcgtGAAGGCTTCAAAGAAAACTAAACAAAGCGTCCACAAGaagtctgaaaaaaaattaaaagtgctgTCTCTTAATCTTCCTCCAGCAACAGTTGATGTCACTAACAGGGAAGAATCAGATTGTCCTGAAAATAATCTTCAAGCTCCAGAGACTGAACAGCCTTCATCAAGAACTGAGTTCATTTGTTCAGTTTGTGATGCTGTCTTCCTTCGGAAAGTAATTCTACAGTCTCATTTTGCTCGGAAGCACTCCGAACTCTACAATTTTCCTTGTAAAGAATGTGGTAAAAAGTTTAAAGTCAAAGGAGATCTCACAACTCATATGAGGTTTCATCGAGAACCACCTGCAATCTGTGATGCTTGTGGGAAAACTTACAAGAATAGTCGCTACCTTTATTTGCATCAAAGATACGCTCACTACAAAACTGCATTTCCTTGTCATCTTTGCAAACGATTTATGGCTACTCAGGAAAATCTCGACCAACATGTGCAACAGCAACATACACATAAGGACAGAGTGATTTGCGACGAGTGTGGTAAAAGTTTTTCTACTAATGATACTCTTAAACGACATGTACAGTTTGTCCACTACAAAATCAGATCCCACGAGTGTGAGATTTGTAGCAAATCGTTTGCTCGAAGATCTGAGTTGAGGCAACATTTACTTATTCACACTGGGAAGCGACTCTTCATCTGTGACATATGTGGTCAACAATTCACCCAAAAACCTGGATTAGTCAGTCACAGAAAACGACATCCTGGTGAACATCCTCCCTTGCCCATGATTCGATTAGATCATGCTCTTAGTGAATTCACTACCAAtgTCGTTCCAACACTTGTTCCAATAGCGAAGCTGCTTCCGCCTTCGGAAGCTGCAGAATTGGATCCTCTCTCACTggacaacttaaaaaaatctccCACTCAAGATGAACAAAAGGAATCGACCATTTGCAAAGAGTGTGGCAAATCGTTTGATAAAAAAGTTGCTCTCCAATTACATATCTTGGCACTTCACAAGAAACTGCAGTTGCACTCTTGTCAAATTTGCAGCAGGTCCTTCGATCGTAAATCGCAATTGAGACAACATCTCATTCACACTGCAAAATGTCACTTTATCAGTGACGTACGTGATCAACAATTCTCCCAAAAACGTCTTAtcaggctcaaaaaaatttatcctgGTGACCAACCTCGATTGCGTGTTACTGGATTGGATAAAATCTTTAAAACTCCAAAACCTGTTGCGGCTAATTACATCATTCCAAGTAATATATCTTCAAAGAAGGAAGTGTCAAAACGAACAGCAGTTGAGGAATCTTCATCAGCAATCAAAAATAAATCCGACACTTTTTGCAAAGACTGCGGTAAACAATTTGCTCGCAAGGATTCATTGAAGACTCATTATATTCATATACACACAGATCACTATGAATTTTCTTGCGAAGAGTGTGGTAAACAATTTAAGCTTTGGCCAGAATTGACGAGTCATGTGAGgcattttcatagaaaaaaagagTTAACAGAAACTCAAGGGAGCTCAACAGAATCGCCACCAAAGAAGAAAACAAGAGTAAGATATAAGAAGGGTTTAAAGGGTTTGAATCTGCTATCTGCCGTCAACTCTCACATGCAGGGAATTCACAAGAAAGAATTGACAACAAATCAGCAAAGCTCTACCAAAAATCAAaaagaaCTCAAAGGACACACAAAGAAGCGACATAGAGAACAAAACTCAACCGAAACAGCAAAGGAAACAGAAAAGTTTATCTGTAATATTTGCGGTATCAAAGTCTTGCGAAAAGACACCCTGAGGATCCATCATATTAGGAGGCACTCACAGCAATTTAATTATCCTTGCAAACATTGTgacaaaactttcaaaatccaaGGAGACCTCACTATTCACACGAGGCTTCGTCATCTAGAACCACCTGTTATTTGTGAAGTTTGTGGAAAAGTAATGAACAAACACACTCTATACATGCATCAGAAACATAATCATTTCCAAACCGAATTCGTGTGTCCcatctgtaaaaaatttatggtctctcaagaaaatcttgatcaaCATGTAAATTCATATCATGCAGCGAAGGAAAGAGTTACTTGCGATGATTGTGGAAAAACTTTTGCAACTAGATTAACCCTCAGCAAGCACATTCTTTGTTTACATTCTGATGTTAAGTCGTTCACTTGTCAGGTTTGTGGAAAATCGTTCGCTCATTATTTTCGATTGAGACAGCATCTTCTCACTCACTCGAGTAGACGACCTTATATTTACGATTTGTGTGGGAAACAATTTAAGCAGAAACCCAGTTTAGTTAGTCACAGGAAACTTCATCCTGGTGAACATCCTCCACTGCCTATTATTCGATTGGATTCTGTTCTCGGTGAGCTTAATCCATAG
- Protein Sequence
- MSKTLKKGGKNYKCDICELNFDYKNKYDMHILRKHTEEKKLSCNYCGKKYKIRNDLRNHVRFYHESKAEVCEICGKTCSNANSLYTHQKRLHNRPKFECPLCHRAMVTQENLDQHLLTQHEQKEKVICEECGKSFTKKSALRLHITAVHRKLKLHSCQICEKSFARQSQLRQHLLIHTGKRLFICDICGQQFTQKPGLITHRKLHPGDHPPLPIIRLDNALSEFIKKFSKRKQQPPTKSKSRLQLRKDIFNSLKNINFIQALNQETQEKPPKKIKVTQEKIPKKKKITAPSSAKTSKGNPDQPAPKRRRRRKKDSNDPSAEDNDGIPKGKAEFICAVCNNVFLKKEILQAHFIRKHTEGYNFTCEECGKQFKIKGDLTTHTRLHHTEPPTVCDVCGKTYKNSLSLYVHQKYAHYKARFECPICKRCMVTQENLDQHTAVMHVEHERLVCHECGKSFSKKVNLRRHVLNIHTNIKSFSCPVCKKCFSQRYHLRQHLLLHTGKRLFVCDICGKQFAQKPGLLSHRKIHPGEHPPLPIIRLDHVLKDLLNKKSRKGEEVKHRKVSKSRSRLTLKKIIFKSIGSVSTQPRIIKEINFVKASKKTKQSVHKKSEKKLKVLSLNLPPATVDVTNREESDCPENNLQAPETEQPSSRTEFICSVCDAVFLRKVILQSHFARKHSELYNFPCKECGKKFKVKGDLTTHMRFHREPPAICDACGKTYKNSRYLYLHQRYAHYKTAFPCHLCKRFMATQENLDQHVQQQHTHKDRVICDECGKSFSTNDTLKRHVQFVHYKIRSHECEICSKSFARRSELRQHLLIHTGKRLFICDICGQQFTQKPGLVSHRKRHPGEHPPLPMIRLDHALSEFTTNVVPTLVPIAKLLPPSEAAELDPLSLDNLKKSPTQDEQKESTICKECGKSFDKKVALQLHILALHKKLQLHSCQICSRSFDRKSQLRQHLIHTAKCHFISDVRDQQFSQKRLIRLKKIYPGDQPRLRVTGLDKIFKTPKPVAANYIIPSNISSKKEVSKRTAVEESSSAIKNKSDTFCKDCGKQFARKDSLKTHYIHIHTDHYEFSCEECGKQFKLWPELTSHVRHFHRKKELTETQGSSTESPPKKKTRVRYKKGLKGLNLLSAVNSHMQGIHKKELTTNQQSSTKNQKELKGHTKKRHREQNSTETAKETEKFICNICGIKVLRKDTLRIHHIRRHSQQFNYPCKHCDKTFKIQGDLTIHTRLRHLEPPVICEVCGKVMNKHTLYMHQKHNHFQTEFVCPICKKFMVSQENLDQHVNSYHAAKERVTCDDCGKTFATRLTLSKHILCLHSDVKSFTCQVCGKSFAHYFRLRQHLLTHSSRRPYIYDLCGKQFKQKPSLVSHRKLHPGEHPPLPIIRLDSVLGELNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -