Basic Information

Gene Symbol
cdc5l
Assembly
GCA_037177015.1
Location
JBAGKK010232893.1:1622-4165[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.4e-17 3.7e-13 51.6 1.5 2 46 9 54 8 54 0.97
2 2 3e-12 1.3e-08 37.0 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCACGAATAATGATAAAGGGCGGCGTTTGGCGCAATACTGAGGATGAAATTCTGAAAGCAGCTGTtatgaaatatggaaaaaacCAGTGGAGTCGGATAGCATCTTTGCTTCACAGAAAATCTGCAAAGCAATGTAAAGCCAGATGGTTCGAGTGGCTAGATCCTAGTATCAAAAAGACAGAATGGAGTCGAGAAGAAGACGAGAAGTTATTACATCTGGCAAAGTTAATGCCAACGCAATGGAGGACCATTGCTCCAATAATTGGAAGAACAGCCGCCCAATGCTTAGAAAGATACGAGTATTTGCTGGATCAAGCTCAGAAAAAGGAAGAAGGCGAAGATGCTTCAGACGATCCTCGAAAACTAAAGCCAGGTGAAATTGATCCGAATCCAGAAACGAAACCAGCCCGTCCTGACCCAAAGGATATGGACGAGGATGAACTCGAAATGCTCTCGGAAGCTAGAGCTAGATTAGCAAATACTCAGGGTAAAAAAGCAAAACGTAAGGCCCGAGAGAAGCAGTTGGAAGAGGCGAGAAGACTTGCTGCTTTACAAAAACGCAGGGAATTGAGAGCAGCTGGAATCACAGTTAATCAAAAGAACAAGAGGAAAAGGGAGTTGAACTACAAttcagaaattccttttgaaaaaagACCGGCAGCGGGGTTTTATGATACTTCAAATGAACACGTAGATCCTTTAGCGGCTGATTTTTCGAGATTGAGGCAACAACATTTGGATGGGGAATCCAGGCAGGAAGCTGAGATGATGGAGCGTAGAAAAGACAAGCAAAAGCTCAAACAACGGAAGGAAAATGATATGCCAATGGGCATGCTGAACAATGAGGAACCTGTGAAGAAACGCAGTAAATTGGTTTTGCCGGAACCTCAAATCTCTGATtctgaattgcaacaagttGTCAAACTTGGTCGAGCGTCCGAggtggCTCGAGAAATCGTGTCTGAAGGCGGTGCTACTGACAGTTTGTTGGCTGATTATTCTTTGACTCCGAATACTGCCGTGACTCCGAGGACACCAGCTGTTCAAGACAGAGTTCTTTTAGAAGCGCAGAATGTTATGGCCTTAGTTAACGTAGACACACCATTAAAAGgAGGACTAAACACGCCTCTCCATAATTCCGACTTTAGTGGTGTTGTACCTTCTTCAAATGCAGTCGTTACACCGAACACTCTACTTGCAACTCCTTTTCGATCACAACGAGTAGATGGCACCCCAATTGCGACATTTAATACTCCAGGATCTGTGCGAACACAGAATGGTGTTCTTGCACCAACTCCGATTCGTGATAAACTTAATATCAATTCCGAAGATGCCTTGGAAGGATCAGAAACTCCTGCACTGAAGAAACAGGTGAAAGAACAACTATGGGCAGGACTTAGATCGTTGCCAACACCACGTAACGATTACGAAATTGTCGTTCCTGAAGAGGAAACAGATGAAAGTAATACGGTGTCTGTTAATGATATCGTTGAAGACCAAGCGGATATTGATGCCAGAAAACAGCAGGAACTTCTTGAACAAAGTGAGTTGCctctaaataaaagttttaggcAGAGAGAAACAGAGTTCTCATGCCCCTGGGACTCTGGGAGTCAACTATTAAGTAAGTGGCGCCTCCTATAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDASDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVNQKNKRKRELNYNSEIPFEKRPAAGFYDTSNEHVDPLAADFSRLRQQHLDGESRQEAEMMERRKDKQKLKQRKENDMPMGMLNNEEPVKKRSKLVLPEPQISDSELQQVVKLGRASEVAREIVSEGGATDSLLADYSLTPNTAVTPRTPAVQDRVLLEAQNVMALVNVDTPLKGGLNTPLHNSDFSGVVPSSNAVVTPNTLLATPFRSQRVDGTPIATFNTPGSVRTQNGVLAPTPIRDKLNINSEDALEGSETPALKKQVKEQLWAGLRSLPTPRNDYEIVVPEEETDESNTVSVNDIVEDQADIDARKQQELLEQSELPLNKSFRQRETEFSCPWDSGSQLLSKWRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01055917;
90% Identity
iTF_00879565;
80% Identity
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