Epri056844.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- br_1
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010244442.1:604-3394[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-07 0.00033 22.5 0.0 2 38 196 232 195 238 0.88 2 4 2.5e-11 4.8e-08 34.8 0.0 2 39 246 282 245 287 0.86 3 4 0.035 66 5.5 0.0 21 34 316 329 302 335 0.81 4 4 2.6e-11 4.9e-08 34.8 0.1 4 39 360 395 357 398 0.94
Sequence Information
- Coding Sequence
- ATGTCAGAGGTCAACAATCAAACTCAAGTTAACGAAAGCTCTTTTTTGCAATGGGAAGATTaccaaaatcaattttctgaaGTCGTTCGCCAGCTCCTTGAAGAGGATTGCATGGTGGACGTGACATTGTCTGTGTCAGGGGAACGAATTCATGCTCATCGCATTGTTCTTTGCGCTTACAGTCCtttatttaaaGAGCTACTCAGTCAGGTTACGGACGACCATCCGACAATTATTTTAACCGGTATATCTCCTGAAAATGTCAAAGCAATTATCGAGTTCATGTATCAAGGAGAAGCTTATTTCCCTGAAGACagtataaagaatattttagaagctgcgttttttcttaaaatagctGGATTAATGGAGTATAAAGTTAGCGAATCTAACGCAAAAATAAGAGACCTTACTGAGGAAACCGATGAACCCATATCagaattgaatgaaattgagGAAGAAGTTTTGGACGTCTTTGAACATGTTTACGACGACACGAATGAACAATCAGAACATAGTGCAACAGAGGAGAgttctgaaagcaaaaaaagaaagcgTCGCCTTTCTATGAAGAGAGAATACAACGAAGATATGTTAGCCAACGCTATTAATAATTTACGCCAAGGACTGTCTTTAATCGAGGCTTCTACTAAGAACAACATTCCTCGTTCTACTTTGTATATGCGAGCAAAAGCTTTGGGAATTCAACTAAATGCTTGTAGAAATGAATATCCTCCAGAATGTATGAAAGCAGCGATAAATGATGTTATTGgAGGATCGAGTTTGCAACATGCATCAGAAACATACGGTATTCCAAAAACGGTACTTTGGCGACGAATGCAAAAGGAAGGCTACCACATAATTCGTcctgaaatgaaaagaaattacgGCTCGGAGAAAAGAGAAGCTGCCGTAAAAGCCTTGGAACGTGGGGAAAATCTCACGAAAGTTTCACAAGAATATCAAATACCAAAGACGACTTTGTTTAGAGACAAGGCTCGATTAGTCGACGAAGGTAAATTACCGACGTCtttctggaaaaaaagaaaaacggaaAACGAAGAGATAAAAAGATGCCGCTTGGAAGAAGCTGTGGCTGCTTGTAAAAGTGGGAAAATGTCGCAAGCAGCAGCTTCCGTTTTTTATCGTATTCCAAAGACTACGATATGGAGGCGCCTGCAACAAgataatataaagaataaaaagaaagcgaAGCATTCTAATCCACTTGCAGATGCTGAAGACAAAGTAGAAGATGCTCACGAATTCACCTTTTGTGAGgtCGCTTCCGGAATCCCGATAACTTATATAGACGAGAATAGTATTCCTGAAGACTCGGTTATAATTCTCACCACTGAAGGTGGCGAAGAACTGAATTTTGAAGGCCGAGCTCAAATTATTGTAAACACTGATTCAAATCAAGAGTTTATCACCAACTCGGCGAACATTGAAGATGAATCCAACTACAGTTCGCACAAAAGTTAG
- Protein Sequence
- MSEVNNQTQVNESSFLQWEDYQNQFSEVVRQLLEEDCMVDVTLSVSGERIHAHRIVLCAYSPLFKELLSQVTDDHPTIILTGISPENVKAIIEFMYQGEAYFPEDSIKNILEAAFFLKIAGLMEYKVSESNAKIRDLTEETDEPISELNEIEEEVLDVFEHVYDDTNEQSEHSATEESSESKKRKRRLSMKREYNEDMLANAINNLRQGLSLIEASTKNNIPRSTLYMRAKALGIQLNACRNEYPPECMKAAINDVIGGSSLQHASETYGIPKTVLWRRMQKEGYHIIRPEMKRNYGSEKREAAVKALERGENLTKVSQEYQIPKTTLFRDKARLVDEGKLPTSFWKKRKTENEEIKRCRLEEAVAACKSGKMSQAAASVFYRIPKTTIWRRLQQDNIKNKKKAKHSNPLADAEDKVEDAHEFTFCEVASGIPITYIDENSIPEDSVIILTTEGGEELNFEGRAQIIVNTDSNQEFITNSANIEDESNYSSHKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00676890;
- 90% Identity
- iTF_00676890;
- 80% Identity
- iTF_00676890;