Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037177015.1
Location
JBAGKK010487139.1:3791-10102[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-26 4e-22 80.6 0.0 2 89 107 190 106 190 0.94

Sequence Information

Coding Sequence
ATGGGTTCCAAGTTTGATGGACACGCTACGTACGAAACTCGTTTCGGGACATATCTGCGAAAAGACATGAGCGAGAGGAGTGACTCCGACTTCCAATTTGTCATTCCACCAGAGGCCCCAGTCTTTGAGCCCACCGCCGAGGAGTTCCTAGATCCCCTCGGGTACATCGCAAAGATTCGTCCGATCGCTGAGAAATCGGGAATCTGCAAGATCAAACCGCCTCCCAATTGGCAACCCCCTTTTGCCGTTGATGTTGACAAATTCAAATTCGTTCCAAGGATACAAAGGTTAAACGAATTAGAGGCCAAGACGAGaataaaactaaactttttaGATCAAATTGCTAAATTTTGGGAACTTCAAGGGTCTTCTTTGAAAATTCCACTAGTAGAGCGGAAAGCACTAGATTTGTACTCTCTACACAGAATAGTAACTAGTGAAGGTGGAATAGAAAATGTGACGAAAGAACGAAGATGGGCAAAAATAGCAAATAAGCTAGGATATCCTTCTGGACGCAGCGTtggaagtattttaaaaaatcattatgaaagaattttatatCCATTCGACGTCTTTAAGCAAGGAAAAACATTGACTGATATTaaaatagaaCCAGAAATAGATGTGAATGAGAAGAAAGACCGGGATTACAAGCCACATGGCATTATATCACGGCAACAAATCAAACCACCGAATGCAAAATTTTCTCGGCGTTCGAAACGATTCGCTGGTCAAGACGACAAGCAAGATGCATTATCAATTAAACAAGAGGATTGCAAAGAAGAGTGTGATTCTGACAACGATTGCAAAGAAGGTGTCAAAAGCAAAAGTGCATCTCCGGAAAAGGCGCCGGAAAACAGCAAGGAGCTGAAGAAACTGCAGTTCTATGGACCTGGTCCAAAAATGGCTGGCTTTAATACCAAAGAAGGCAAAAAGTCTAACAAAACTAGGGGAATTAAACTCACCTACGAATTCGATCCGttGGCCAAATACATCTGTCACAATTGTGGAAGAGGGGACAATGAAGAGAACATGTTGTTGTGCGATGGATGTGACGATAGTTATCATACCTTTTGTCTTCTACCCCCTTTAACTGAAATTCCAAAAGGCGACTGGCGTTGCCCAAAGTGTGTTGCCGAAGAGGTTTCGAAACCGATGGAAGCATTTGGTTTCGAACAAGCTCAGAGAGAATATACTCTTCAACAGTTTGGGGAAATGGCTGATCAATTTAAGAGTGATTACTTCAACATGCCTGTACACATGGTACCGACTTCACTCGTGGAGAAAGAGTTTTGGCGGATAGTTTCTTCGATCGACGAGGATGTCACTGTCGAGTATGGTGCTGATCTTCACACTATGGATCATGGCTCTGGTTTTCCGACGAAAACCAGTGTTAATCTCTTCACCTGTGACCAAGAGTATGCAGAATCTTCCTGGAATTTAAACAATCTTCCTGTTCTTCACGGAAGCGTCTTAGGTCATATTAACGCAGATATAAGTGGTATGAAGGTCCCCTGGATGTACGTTGGTATGTGCTTTGCGACTTTCTGCTGGCACAACGAAGATCACTGGAGTTACTCAATTAATTATCTGCATTGGGGAGAACCAAAAACATGGTATGGAGTGCCCGGCTCACAGGCTGAGAAGTTTGAACACTCTATGAAATCCGCTGCGCCTGAATTGTTTCACAGTCAACCAGACTTGCTGCATCAGCTGGTTACTATAATGAATCCCAACATTTTGACAAACGAGGGAGTGCCAGTTTTTCGAACAGATCAACATGCGGGCGAGTTCGTAGTCACCTTTCCCAGAGCATATCACGCAGGTTTCAATCAAGGGTACAATTTCGCTGAAGCAGTAAATTTTGCTCCTGCTGATTGGTTGAAAATGGGTAGGGAATGCATCTCGCACTACTCAAATTTGAGGAGGTTCTGTGTTTTCTCACATGACGAACTTGTCTGCAAAATGTCTTTGGAACCTGACACGTTGGATATCGGAGTTGCTACAGCAACTTATCATGATATGTTGCAAATGGTCGATGACGAAAAGAAGCTGAGAAAGAACCTTCTTGAATGGGTGAGATTACTGTTtactctatttttaaatgattataaGATTACTGTTtactctatttttaaatga
Protein Sequence
MGSKFDGHATYETRFGTYLRKDMSERSDSDFQFVIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTSEGGIENVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPEIDVNEKKDRDYKPHGIISRQQIKPPNAKFSRRSKRFAGQDDKQDALSIKQEDCKEECDSDNDCKEGVKSKSASPEKAPENSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGIKLTYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLEPDTLDIGVATATYHDMLQMVDDEKKLRKNLLEWVRLLFTLFLNDYKITVYSIFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00652462;
80% Identity
-