Basic Information

Insect: Eucera pruinosa
Gene Symbol: -
Assembly: GCA_028830335.1
Location: JAMYCR010000002.1:25309987-25315653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.1 13 7.3 0.5 1 21 85 105 85 105 0.91

2 19 0.039 4.9 8.6 0.2 1 21 113 133 113 134 0.95

3 19 0.011 1.4 10.3 5.0 1 23 479 502 479 502 0.95

4 19 5.7 7.2e+02 1.8 1.0 5 23 509 528 508 528 0.92

5 19 0.27 34 6.0 1.4 2 23 535 556 535 556 0.96

6 19 2.7 3.4e+02 2.8 2.9 1 21 583 603 583 604 0.94

7 19 0.0021 0.27 12.5 0.7 1 19 735 753 735 756 0.94

8 19 0.00012 0.015 16.5 0.1 2 23 764 786 764 786 0.93

9 19 0.1 13 7.3 4.4 3 23 798 819 796 819 0.94

10 19 0.013 1.7 10.1 2.9 1 23 866 889 866 889 0.96

11 19 0.014 1.8 10.0 5.2 1 23 900 923 900 923 0.94

12 19 0.11 14 7.1 7.8 1 23 990 1013 990 1013 0.94

13 19 0.0049 0.61 11.4 0.1 3 20 1077 1094 1075 1096 0.93

14 19 0.0032 0.4 12.0 1.2 1 23 1103 1125 1103 1125 0.97

15 19 0.00038 0.048 14.9 0.2 2 23 1134 1156 1133 1156 0.93

16 19 0.0041 0.52 11.6 0.2 2 21 1198 1217 1197 1218 0.94

17 19 0.085 11 7.5 0.7 2 23 1226 1247 1226 1247 0.92

18 19 0.0019 0.24 12.7 0.9 1 23 1257 1280 1257 1280 0.93

19 19 0.58 73 4.9 0.1 2 23 1395 1417 1394 1417 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.1	13	7.3	0.5	1	21	85	105	85	105	0.91
2	19	0.039	4.9	8.6	0.2	1	21	113	133	113	134	0.95
3	19	0.011	1.4	10.3	5.0	1	23	479	502	479	502	0.95
4	19	5.7	7.2e+02	1.8	1.0	5	23	509	528	508	528	0.92
5	19	0.27	34	6.0	1.4	2	23	535	556	535	556	0.96
6	19	2.7	3.4e+02	2.8	2.9	1	21	583	603	583	604	0.94
7	19	0.0021	0.27	12.5	0.7	1	19	735	753	735	756	0.94
8	19	0.00012	0.015	16.5	0.1	2	23	764	786	764	786	0.93
9	19	0.1	13	7.3	4.4	3	23	798	819	796	819	0.94
10	19	0.013	1.7	10.1	2.9	1	23	866	889	866	889	0.96
11	19	0.014	1.8	10.0	5.2	1	23	900	923	900	923	0.94
12	19	0.11	14	7.1	7.8	1	23	990	1013	990	1013	0.94
13	19	0.0049	0.61	11.4	0.1	3	20	1077	1094	1075	1096	0.93
14	19	0.0032	0.4	12.0	1.2	1	23	1103	1125	1103	1125	0.97
15	19	0.00038	0.048	14.9	0.2	2	23	1134	1156	1133	1156	0.93
16	19	0.0041	0.52	11.6	0.2	2	21	1198	1217	1197	1218	0.94
17	19	0.085	11	7.5	0.7	2	23	1226	1247	1226	1247	0.92
18	19	0.0019	0.24	12.7	0.9	1	23	1257	1280	1257	1280	0.93
19	19	0.58	73	4.9	0.1	2	23	1395	1417	1394	1417	0.92

Sequence Information

Coding Sequence: ATGGGGGATACCCAGaCTCCTCAATGTGGAATACAAATAAAGGAAGAGCCACCCGATTCGGACATCGAGAACAAGAAGTTGCctattaatacaaataaaccGGATGAAAAAGCATCAGCACCCAAAAGTGGATCTACGGATCGTGTTGAGCGTAAGGATAAGAAATCTGTGGTACCTCAAGATTCCGCCCATATAAAGAAACAGAAACACAATCAAGGCAAAGTAAAACCTAAGAAACGAAGCAGCGAAATATTCAACTGCCCCATTTGTTTCATAACTTTTAATAATTCAGCCGGACGCCATATCCATCAGAAATGTTATAGCATGTCGGCTACGTACGAATGCCATAAATGCAATGGGTTGTTCGCTGTCGCGTCTGGATTGAAAATGCATCTTAAGAGTGATATATGTACCAGTAAATCTTCGCATTGGTACAGATACGCTTGTAACTATTGTTCCCGTCGGCATCCAGATAAAAGACAGGTTCAATCGCATTTATTCCATTTCCATGGCGATTTGATAGCGGCTGGTATAACCGAGTCTGATAAAGCATCTCGTACGAAGAAAGAGAATTCGAATACAACATCCCCTAAAAGGCTGAATACATCCCCTAAAAGGCTGAATACATCCCCTAAAAGGCTGAATACATCCCCTAAAAGGCTGAATACATCCCCTAAAAGGTTGAATAATTGGCTCACACCCTCGAGAAAGCGGAGCAATAATGTAGTTAATGGCATGCCTTCGAAGAGGTTGAAACAAACTACTCTTACAgacttcatttcattatttaacgCGAATGAGGATGAGGAATGCGTTGTACCACAGAAAGCCATTAGTTGCCTGAATACTCCCGTTTTAAGTACTCCAAATACAATATGCCAGTCGCCAACCACTTCGAAAGTTACCGAAAGCTCCACCAAAGATGATGCTTCTGATAAAAAGCCATTCGTTCACATCCACGTGAACTCTAACGCGATGATGTCGTTGCTGGGTAAAGAGACCAAAACCAAACTTGACGGTTCGATCACTCCCCAGTTCGATACTGCTTACAATCTTAGGTCGGTCAGAGCGACTTCTTACTGTACGCGAAGTTCTCGCGATTTACCGCTGCCTGAACTTACTACCATACCTTTGGAATATCTTCTTAGAAAAAGACCTCTTCGTTTATATCCGAGGaggaagaaaattcaattttcggATGATAAATGGAAGGCTAAGTTTAACTGCAAAGATTGCGTGATTCGCTTGGAGAGATGCGACGAAATAAATGGGAAGGTCGAGAACGGTCTGAGTCCAAGTTCGGGTAGATTGCGATCCGTAAGCATGGATGTTCCTTTGGTGAAATTCatcgagtttgaaaattctatttctcACAAGATGATCATAACCGAAGAACGAACGGAAACAGCGGCAGCTGATGTTAAAGGGAAAATCCACCAATGTCATTTTTGTAAAAAGGTGTTTGCTTCGCAGAAAGACAGACGCGAGCACACGGAACGCGCTCACGTGGTTTACGTCTCGAGCATATGCAACGCGCGTTACTCTTCCATGAAGAAATTACTGAATCACTATTTGCACCAGCATATGGTGCTTAATCGAAGGAAATGTTGCATATGCAACGAGAAACTCCGAAACCCTCAGATCCTGAAACGACACATCGCTTTGCATTGCGTGAAAACAACGCGTTCCAGAAAGGACACTCTTCCAATCGATGTTGAAACCCATTGCATCGTGGCGAAGAAGCAGCACAAGTGCGAAGCTTGTCGCAAGCGCTTTTGGTTGAGCTCATGTTTGAAGGAGCACCAAAAAGTCTGCAGCCTCGCGAAGGCACAGCAGGCGAGCATCCAAAAGTCACCTTCCATCAAATCCAATAAGGAAGAAGTAGTTCGCGAAGAAGAATCTTGCAAACAAGAATCGCGCGAAGAAGAATCTTGCGAAGAAGAATTACGCGAAGAAGAATTTCGCCAAGAAGCATCTCGCGAAGAATGCCACGAAGAATTACTTTGCGCAGAAGAATTTCACGAAGAAGTGCAAAAAGTGTCGttcgaaattattaaagtaGAACAGCCGCCGGTCAGTTTGCCTGAGAGTACTACTGTGATCACTCCTCCGTTTTCGCCTATACCTGCGAATACGAATCGACTAATTACCAGGGTCGCTCGTGTAAAGGGTTACGAAGACGATATGCCAAACAGGTCTAAGTTTCCCTGCACCATTTGTGGGAAACAGTTCCAAACGTTTCAGAACTTGTGCATGCACGAAGATATCTACTGCAGACCGGCCGTCAATGTATGTAGCACTTGCGGCACTGCTTTCTCCACCAAAAGACTGTTGCAAATTCACATAATTGCGACTCATACTCCTCTCTGCCCGGAGAGGTACATGTTGTTCTGCAAATTTTGCAATCAAGGTTTCAATAAGAACATGTCCCTTCGAAGCCATGAGCGTCATTTCCATGCCGGTCACATTTCCAAGTTGTTGGTGAGCTCCGAGTATCTTAAGGACGTTAGTCCAGTGTGCAACGTGTGCACTTTACTATTCCAGTCGTACGAACGCTTCATCGAGCATAAAATGTACTATTACGAAGGCCGGTCGTTCGTGTGCTTCGTTTGCGACAAATTGTTTAATGGATTCTTCAATCTCCAACATCACTACAAGTTGGAGCATTGCGGGTCACATTTACGCGAGGCCTACGTTTTTAGGTGTAATATTTGTAGCGAGGGTTTCAGTTACGAGTCGCATTTCCATGCGCACAAACTGCATGCCCACGCGCTGGACGCTACAGTACTGAATCACTTGCACAGCATGCAAGATCACACTTACGCGATGACGCCTAACAACATGGCAGCGACGGAGGAACCGGTCGATGCGTCGCTGAAAGTTTACCCCTGCAACGTGTGCGCATTGAAGTTGCTCAGCGAGAAAGATTTAGAGATGCACCGGTTAGAGTACTCCGTCGATGGTGATTTCTGTTGCAACGAATGCGACCGGAAGTGTCGCACCCGCCACGTACTCGCGAAGCATCAGAGTTTGACGCACACCGGTTGCGACGTCAATGCGAGCTTCAAGTGTCACTTTTGTAGCGAAGTGTTGACCACGTCTATGTCGATGCGATGCCACGTGAAACACTTTCacgagaataataaaaattatatgagtAAACCTTGTCAGAATAGGCTTTTGAACAGCGGTGCTGGTGCTAATGAAAACAGTAACAGTGTGTTAGCGTGTTCGACTTGCGGTATGATATTCAATCGGAAGATCGACCTGAAGTATCATTTGTTACAGTACTCCGATATAGGTGACTTCAGTTGTTCCATGTGTcaaagaaaattcgtagagttGACCCTGTTAGAGAAGCATAAGGCCAAACATTACACGGTAAATTTGTCCGCGTCTCGGTGTCCAATTTGCAATTTAGGCTTTGTGACCCCCGCGGACCTTCGCACGCACGTGTTACATTTGCATCCGTACGAAACTTTCGGTATTAACAAAGTAATGGGGTTTCGCAAAATTATCCCCAAAGTTGTTACCAGTATTGAGGGTAAAACTGTCTTCCCTTCCGCTAATCGCGGGAAAGATAGACCAGTGAAGTGTACCGAGTGTAAGTTAGAATTCGTCGACAAGAAGGGCTTGGCGAAGCACTTGTCCCGCTATATGAACTACGGGAAACGCGTGTGTCCCATTTGCGGCCGTCGATTCCACTGGTTGACCCCGTTCGAGCAACACGTCCGGAAACACAACACATCCATCAAACGTTTCTTGAGATACAGCTGCCTTTATTGCACCGAGAGATTCCGAAGCTCCATTGCGTTGTACGCGCACATGGTTCACATTCACGGTGAAGCTGGAAACCTGGTCGTGAACGAAGATGAAACTGAGGGCGAAACCAACGATGCGGACGTCGATGACGTTGAGGCTGAACCTGTTGCCTGCGCGGACCCATCTTCGTCGGATACCGCCACGGAAGAACAAGATATTCTCATGATAGACATAATAGAAGACATCACGGATGACACCAATCTCACGGAAAACGTGGACACATTCTATTATACTTGCCTTCTGTGCAACTCGAAGCATTCGACTTTGAAGAAGTTCTACAAACATTTTAGTGATAAACATACGGCAGGCGGCAATTGTCCGGTAATAGATTTGACGGAGTCCAATAGCGGGAATacgaaatattgcaatatttgcaatagaATGTTGAGCGATGAGGAGAGCATCGATGATCACGTGTTGAGAGTTCACCAGACTGGTTATAACTGGTCCAGCGAACAGACTGCATTTACGGGAATTAATGATCTGCttaaaaagaatgaatgcgaTATGGTGGAGATCATGTGGGAAAAGAAATCGAACCCTGTTAATTGTGTAAGTACCAACGAGGATGTGGCGGGTTGTGATGACCAGGCGGCGAATGAAGATCCAATTGTTGTGAATGAACAGAATAATGGTTTGATGCTGGATAATGTAACAGTTGCGAATAACAGTGTTTGTAAACTGAAAGTGAAAGCGTTTGCGAGGATGCAGTTAGACTGA
Protein Sequence: MGDTQTPQCGIQIKEEPPDSDIENKKLPINTNKPDEKASAPKSGSTDRVERKDKKSVVPQDSAHIKKQKHNQGKVKPKKRSSEIFNCPICFITFNNSAGRHIHQKCYSMSATYECHKCNGLFAVASGLKMHLKSDICTSKSSHWYRYACNYCSRRHPDKRQVQSHLFHFHGDLIAAGITESDKASRTKKENSNTTSPKRLNTSPKRLNTSPKRLNTSPKRLNTSPKRLNNWLTPSRKRSNNVVNGMPSKRLKQTTLTDFISLFNANEDEECVVPQKAISCLNTPVLSTPNTICQSPTTSKVTESSTKDDASDKKPFVHIHVNSNAMMSLLGKETKTKLDGSITPQFDTAYNLRSVRATSYCTRSSRDLPLPELTTIPLEYLLRKRPLRLYPRRKKIQFSDDKWKAKFNCKDCVIRLERCDEINGKVENGLSPSSGRLRSVSMDVPLVKFIEFENSISHKMIITEERTETAAADVKGKIHQCHFCKKVFASQKDRREHTERAHVVYVSSICNARYSSMKKLLNHYLHQHMVLNRRKCCICNEKLRNPQILKRHIALHCVKTTRSRKDTLPIDVETHCIVAKKQHKCEACRKRFWLSSCLKEHQKVCSLAKAQQASIQKSPSIKSNKEEVVREEESCKQESREEESCEEELREEEFRQEASREECHEELLCAEEFHEEVQKVSFEIIKVEQPPVSLPESTTVITPPFSPIPANTNRLITRVARVKGYEDDMPNRSKFPCTICGKQFQTFQNLCMHEDIYCRPAVNVCSTCGTAFSTKRLLQIHIIATHTPLCPERYMLFCKFCNQGFNKNMSLRSHERHFHAGHISKLLVSSEYLKDVSPVCNVCTLLFQSYERFIEHKMYYYEGRSFVCFVCDKLFNGFFNLQHHYKLEHCGSHLREAYVFRCNICSEGFSYESHFHAHKLHAHALDATVLNHLHSMQDHTYAMTPNNMAATEEPVDASLKVYPCNVCALKLLSEKDLEMHRLEYSVDGDFCCNECDRKCRTRHVLAKHQSLTHTGCDVNASFKCHFCSEVLTTSMSMRCHVKHFHENNKNYMSKPCQNRLLNSGAGANENSNSVLACSTCGMIFNRKIDLKYHLLQYSDIGDFSCSMCQRKFVELTLLEKHKAKHYTVNLSASRCPICNLGFVTPADLRTHVLHLHPYETFGINKVMGFRKIIPKVVTSIEGKTVFPSANRGKDRPVKCTECKLEFVDKKGLAKHLSRYMNYGKRVCPICGRRFHWLTPFEQHVRKHNTSIKRFLRYSCLYCTERFRSSIALYAHMVHIHGEAGNLVVNEDETEGETNDADVDDVEAEPVACADPSSSDTATEEQDILMIDIIEDITDDTNLTENVDTFYYTCLLCNSKHSTLKKFYKHFSDKHTAGGNCPVIDLTESNSGNTKYCNICNRMLSDEESIDDHVLRVHQTGYNWSSEQTAFTGINDLLKKNECDMVEIMWEKKSNPVNCVSTNEDVAGCDDQAANEDPIVVNEQNNGLMLDNVTVANNSVCKLKVKAFARMQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -