Basic Information

Insect: Eucera pruinosa
Gene Symbol: zfh1
Assembly: GCA_028830335.1
Location: JAMYCR010000005.1:13727516-13739456[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.84 1.1e+02 4.4 1.1 2 23 88 110 88 110 0.90

2 7 2.6e-05 0.0033 18.6 0.6 2 23 129 150 128 150 0.97

3 7 6.2e-06 0.00078 20.5 7.8 1 23 159 181 159 181 0.99

4 7 1.5e-05 0.002 19.3 1.9 1 21 187 207 187 208 0.95

5 7 0.00024 0.031 15.5 4.5 1 23 653 675 653 675 0.94

6 7 7.8e-05 0.0099 17.1 7.1 1 23 681 703 681 703 0.98

7 7 0.0016 0.21 12.9 4.3 1 21 709 729 709 730 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.84	1.1e+02	4.4	1.1	2	23	88	110	88	110	0.90
2	7	2.6e-05	0.0033	18.6	0.6	2	23	129	150	128	150	0.97
3	7	6.2e-06	0.00078	20.5	7.8	1	23	159	181	159	181	0.99
4	7	1.5e-05	0.002	19.3	1.9	1	21	187	207	187	208	0.95
5	7	0.00024	0.031	15.5	4.5	1	23	653	675	653	675	0.94
6	7	7.8e-05	0.0099	17.1	7.1	1	23	681	703	681	703	0.98
7	7	0.0016	0.21	12.9	4.3	1	21	709	729	709	730	0.96

Sequence Information

Coding Sequence: ATGCACGTGTGTCTGGTTGTTTCAGGTTGCAGCGAGGACGAGGCAGCAGGTGTCGTGAACGCGGAGGTGGGCGGGGGTTGCGCGGCCGGGGCGCCAACCACAGGAAGTGCCGCTGGAGGTGGTAGCAGGACAGGTAGCGAGGCCGGTGGTGGTGGCGGAGGAGGCGGTGGTGGAGCAGGAACAGGAACAGGAGGTAGTGGAGGAGGCGGCCGTGGTGGTAGCGTCGGCGGCGAGGGCGGATCGACGAAGCAGGGTGGCGAGAGGTGTCCCCAGTGCGGCATCCTCTGTCGGGACGTCCACGTGCTTCAGCTCCATCTCGAGGACACGCACAAGACCTCGTACGCCATCGACAAGAACGATCTCAACGCTCAATTCCCCCAAGTGTCCTGCAAGGTGTGCAGCAAGACTTTTGCAAACGTCTACCGACTCCAGAGGCACATGATCAGCCATGATGAGAGTGCCGTGCTTCGTAAGTTTAAGTGTCCCCATTGCGAGAAAGCCTTCAAGTTTAAGCATCACCTCAAGGAGCACCTTCGCATTCATAGCGGTGAAAAGCCATTCCAATGCAACAACTGCGGCAAACGCTTCTCCCATTCAGGCTCGTATTCGAGTCACATGACCTCGAAGAAATGCCTGATAGTGAACTTAAAGAAATCCAGGCACACGAATGTGAGCAACGCGGATCGTGGTCCAAAAAAGGCGCAACAACCCCTGCCGCCGGGACGACGCGAGGTCGATCTGCTCGCGGCGAATAATAACACTTTCCTCCCTATTCTGCCGAAGCTTTCACCCTCGGATTATCAGGAGATACAACGGGAAGGAGCGGGTATTTACGATATGCCGACCCTTCTGCCGCAAATGATGGGCTTCGGTAGCTACTTCCTACAGACGTCCCTCGGCAAAATCTTAAATCAGCTACATTCCAAGAGATTGGACGAAGTAGCCGAGCAATTCGAGTCTCACCGGGAGCTTATGAGCCCGTCGACGGCGGATTCTGAGGGCACGGAGGGCACCGAGGGTAAAGAGTCCCCGGCACCGAGCGATCCTCAGGGTTTGGACGCGGTTCGACGTATTTTGGAAACGGTGAACACCTCCGTCACGAAGCAACTCCTCGAGGCAAACGTGCGGAAATTGTCCACCTCGCCTGCTACGATGAAAAGGGAGTTCGAGGAGGATTATCAAGACCAAGATAGCGAGATGTCCAGCGAGATAACACACTATCCGGACTGGTCAACGGCGGATCAATATGATTCGCAGAGCGAAGGTTTGGCGGCGAAACTCGAGGACGTGACTCAGCCCAGCGCGAAATCGGGCTACAAGAGAAAAGCGGAGGACAGTTCGGAAGCGGGTTCGGAAGACGAGGAAGATGGTTCACAGACGCACAACGATAACGGAAGGAGAGTTAGGGCTAGATCGTTGATAGACGACGAGCAATTGGCTGTTCTCAAGGGTTACTATGCTATTAATCCTCGGCCCAAGAAGGAGGAGATCATCATGATCGCAAGCTACATCAATTTCCCCACCCGTGTTGTGCAAGTTTGGTTTCAAAATTCCCGAGCGAGGGACCGGCGAGAATCGAAGATACCACCTTTAGTTCCGTTGGCTAATCCAGCTAGCCAGACCACGATCGAGCAACCATTAGACTTGTCAAAGAAGGAAGCTCTGACGGAGCCGGCGTGTAAAGATAACGACAGTGTCCCCATAAAGCACACGTCGTCGTCTCCCATTGAACAGAAGAACGATAATCACTCGGCTCATAATCAAGACGCGGATGACCTGGAGGATTCGCCGCTCGTTATCGACGAAGAGACCACCGATTCTGTGGAAACGAAGCGTACGGCCTCGATCGAGGGAGAAATAGTTCCCAAGAGTCAACCTCTCGCAAATGTGAAGAACGAAAGCGAAAATGCGAGTCAACCAGAAGCTCCGCCTGCGGCGGAAATCGAGCAGGGTGTCTACTTCTGTGATCGGTGTGACAAGACATTCTCCAAGCACAGTTCCCTAGCAAGACACAAATACGAACATTCCGGGCAAAGGCCGTACAAATGTGTAGAGTGCCCAAGGGCGTTCAAGCACAAGCACCATCTGACCGAACACAAGCGATTGCATAGCGGCGAAAAGCCCTTCCAGTGCTCCAAGTGCCTCAAGCGCTTTTCTCACTCCGGCTCCTACAGCCAACACATGAATCATCGTTACTCTTACTGCAAGCCGTACAGAGAATAG
Protein Sequence: MHVCLVVSGCSEDEAAGVVNAEVGGGCAAGAPTTGSAAGGGSRTGSEAGGGGGGGGGGAGTGTGGSGGGGRGGSVGGEGGSTKQGGERCPQCGILCRDVHVLQLHLEDTHKTSYAIDKNDLNAQFPQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRHTNVSNADRGPKKAQQPLPPGRREVDLLAANNNTFLPILPKLSPSDYQEIQREGAGIYDMPTLLPQMMGFGSYFLQTSLGKILNQLHSKRLDEVAEQFESHRELMSPSTADSEGTEGTEGKESPAPSDPQGLDAVRRILETVNTSVTKQLLEANVRKLSTSPATMKREFEEDYQDQDSEMSSEITHYPDWSTADQYDSQSEGLAAKLEDVTQPSAKSGYKRKAEDSSEAGSEDEEDGSQTHNDNGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIIMIASYINFPTRVVQVWFQNSRARDRRESKIPPLVPLANPASQTTIEQPLDLSKKEALTEPACKDNDSVPIKHTSSSPIEQKNDNHSAHNQDADDLEDSPLVIDEETTDSVETKRTASIEGEIVPKSQPLANVKNESENASQPEAPPAAEIEQGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCVECPRAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00086058;
90% Identity: iTF_00982854;
80% Identity: iTF_00675908;