Basic Information

Insect: Eucera pruinosa
Gene Symbol: -
Assembly: GCA_028830335.1
Location: JAMYCR010000007.1:1790711-1800854[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00041 0.052 14.8 0.7 2 19 456 473 455 477 0.89

2 17 3.9e-05 0.0049 18.0 4.2 1 23 483 505 483 505 0.98

3 17 0.00037 0.047 14.9 0.1 3 23 513 534 511 534 0.94

4 17 1.9 2.4e+02 3.3 3.7 1 23 541 564 541 564 0.98

5 17 3.4e-05 0.0043 18.2 1.3 1 23 568 590 568 590 0.97

6 17 0.0026 0.32 12.3 0.5 1 23 596 618 596 618 0.98

7 17 0.0003 0.038 15.2 2.1 1 23 624 646 624 646 0.96

8 17 3.3e-05 0.0041 18.3 3.6 1 23 651 673 651 673 0.96

9 17 0.77 97 4.5 1.6 1 23 1279 1302 1279 1302 0.98

10 17 0.00012 0.015 16.5 0.9 1 23 1308 1330 1308 1330 0.97

11 17 3.3 4.2e+02 2.5 0.9 1 23 1336 1358 1336 1358 0.83

12 17 5.6e-06 0.00071 20.7 0.5 2 23 1365 1386 1364 1386 0.97

13 17 0.99 1.2e+02 4.2 0.5 2 23 1393 1415 1392 1415 0.94

14 17 6.5e-05 0.0082 17.3 2.0 1 23 1419 1441 1419 1441 0.98

15 17 0.028 3.6 9.0 0.7 1 23 1446 1468 1446 1468 0.98

16 17 4.5e-07 5.7e-05 24.1 0.5 1 23 1474 1496 1474 1496 0.98

17 17 2.1e-05 0.0027 18.8 0.8 1 21 1501 1521 1501 1522 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00041	0.052	14.8	0.7	2	19	456	473	455	477	0.89
2	17	3.9e-05	0.0049	18.0	4.2	1	23	483	505	483	505	0.98
3	17	0.00037	0.047	14.9	0.1	3	23	513	534	511	534	0.94
4	17	1.9	2.4e+02	3.3	3.7	1	23	541	564	541	564	0.98
5	17	3.4e-05	0.0043	18.2	1.3	1	23	568	590	568	590	0.97
6	17	0.0026	0.32	12.3	0.5	1	23	596	618	596	618	0.98
7	17	0.0003	0.038	15.2	2.1	1	23	624	646	624	646	0.96
8	17	3.3e-05	0.0041	18.3	3.6	1	23	651	673	651	673	0.96
9	17	0.77	97	4.5	1.6	1	23	1279	1302	1279	1302	0.98
10	17	0.00012	0.015	16.5	0.9	1	23	1308	1330	1308	1330	0.97
11	17	3.3	4.2e+02	2.5	0.9	1	23	1336	1358	1336	1358	0.83
12	17	5.6e-06	0.00071	20.7	0.5	2	23	1365	1386	1364	1386	0.97
13	17	0.99	1.2e+02	4.2	0.5	2	23	1393	1415	1392	1415	0.94
14	17	6.5e-05	0.0082	17.3	2.0	1	23	1419	1441	1419	1441	0.98
15	17	0.028	3.6	9.0	0.7	1	23	1446	1468	1446	1468	0.98
16	17	4.5e-07	5.7e-05	24.1	0.5	1	23	1474	1496	1474	1496	0.98
17	17	2.1e-05	0.0027	18.8	0.8	1	21	1501	1521	1501	1522	0.94

Sequence Information

Coding Sequence: ATGGAGTTGGGTGAGGGAGAGGCGCAGATTTGTCGACTATGCGGACAGTATGAAAGCATATACATCGATGTGTTTGGCGAAGAAGGCACCAAACGATTTTTGGGCTTAAAGATCCACACAAAAATCAACATTACGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAATGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCACCCTTAACAGAGATTGCTGAGGTAAAGACTGAAGATACACCACCAAGTACATcaacaaacaataataacaatgaaacCAACAAAAATCTTAATTCTCCAAATGAAGAGAGTGTTAAACAAGTAGAACATCGTGTTCTGAGGACAGCAACAAAGACTCAAAGAAACTTAAGGAATCAACAACAAGTAAAAGGAAATGAAGAAACTACAAGTAATCAGAATAGTATCCAAACTACAAGTGAAGATAATGTAGACAACCAACAACCTGTTCAGAATTCTGAAACAACTCCCACAAGATGGCTTAGAAGTAGACAAACCACTGTAGAAACTGTTGCTGCAAATCAAACAGCAAGTGATACACCAATTGCAAATAGACTTAGAAGTCATAACAATGCTGCCACAGAAATCACTCTTAGTCCTCGAAGTAGCCCCAATGAAAATGGTGAAAAACAAACAGCAAAACAGGTTCAAAAGCAAGATCCACATACCATTCAAATTCCGACATCTGCCTTAAATAAACTTGTCAATATTGTATCAAACTCTCCAAATATGGAAGTTTCTGTAAAGGAGTCCAGACATCAAAGCAGCGACCTTGAAGACATTAGTTTCACTATAGAATTATGTAAAAAGGAAAGCGACGAAGTAGCCACCGTTCGAGCACGAGTATTCCCAGACCAAGATTCTTGTTTAGTGGATAAGGCTATTGTTGGTCTTTTCCAAAATCAAAGTTGCGTAGAAATGAACAGTATAATAAATACCATCATCGACAGTAGCCTTATGAACAGCAATTCGACGAAACTGAATGATTCTGCTGAATTTGAAGAAAAGTGGCAAGCTACTCAAAATCCGGAGGAGCTCTTCAGAATCGACGGGGAAGAGATTCGCGTCGACGACAACATCGAACACATCGTCACGGATAATCAAAATGGCTACTCTTGTAAACTTTGTTGCAAGTTTTACGAACGCAAAGACAAGTGTATGGTTCACGTGAAGACGCATCTTGGCATTAAACAGTATACTTGTATTCTATGCAACGCTAAATTCGTATGTAAATCCGACGTGATGAAACATATTCGATGCTCGCATACTAATCCCAGGCCGATACAATGTCCGAAATGTCCGAAAAGGTTCAAGTCGAAGTTCTATTTAATGGAACACGATAATGTGCACAAAGGTGTGAGGCCTTATTCTTGTACGGACTGTGGTCAAAGTTATCACCACAAAGTATCATTGCAGATTCATATGAAATCGCATTTACCTCCACAAAACTTAGCTTGCGAATATTGCGGCAAAGTGTTTCCGTATCGCACGAGATTATTAAGTCATATAGCAAGCgtacatttaaaaaatcgtCGCAATTTTAGGTGCCGATTTTGTTATAATCTTTACTCAAGTCTTTCCGTTTTGAATGATCATATTAAAACTTGTCACGCGACTACGTATACTTGTGAGGTTTGTAATAAAACGTTCAAAGTCTCGTCCAAGTATAAAGCTCACGTGTTGCAACACACGAATCCTAAGCCGTTCGTATGCAATGTTTGTAACAATAGATACGCATCTAAAGCATTCCTAAATGAACATCTATTAAAGCACGAAGGGCTGAGGAAACACATTTGCCAAAACTGTGGTGCAAAGTTCGCTCAAGCTAGTCATCTGGCTGCACACCGGCACGTGCATGGTGAAAAAACGCACGCCTGCTCGGAGTGCGGCCGAAAGTTCAATAGGCGCGATAACATGAAAGTACATAGAAAAAGACATTTCGAAGATAAAAAGACTGGTGTTAATAAACCGAAGAACGTTTCTGGTGGCGACGTGGCTTCCGTTGCATCTAACGAAAAGGGCAATGTATATTACCAGATAAAAGAAAATGACGGACTGCCTCAGATTGTTTGTATACGATGTCTGGGTGCATTGGAATTTCTGTGTGATTTTTATGAACGTTCTCATCTTACCCAAAAGGAACTGTTAGAGGCTagtGAAAATGGAAAAGGAGGAAAAACCCAGGAAGGTGACGATGCAGAAGAGGATAAGGAAAACGTTGCTCCATCGCTGAACGAGGCGAAACGAAAGACGAAGATTTTATCACCTGAAAGTTCAAAGAGCATACAAAAATTcttcattgaaaataatatgTCGTACTATAGAGATGGAAGAAAAGAACAGAAGGGCAATGATTTAGATAATAGCGATTATGCCAAGAATACTCAGTCAGTTGTACAAACTGTACAATTATCCAGTGTAATTTTACATGATAAAATATTGAAGGATAATCAGAATACTACTAgtaatttaaaatgtagaaCTAGTTTGatggaaagaaaagagaaaaagactGTATTGTGTACAACAAGATCTTTGAATGACATGAACTCTTCAGAgaagaatgaaacaaatgttaGTTCAGAACTGCCTGTACGACGCAAAAGAGGTCGGAAAAGCAAACTAGAGAAGATGAGAGAAGCTAGtcttttggaaaatttaaaaaaggagGTCCAAGGTGAGTTGTGTGGCGGTAAGAGTGATAGAGATAGTTTTAATGAAAATGGTAAAAGGCACTGTCTGCGTGATATTTGTAGAAACAGTAAATCCAATAGAATgacaaataatactataatctCATTGAAACGACAAGTCGAGCAAGTGATAGCAAAGAAACAAGTGCCAATGGTGAACACATCGTTGAATCTAGCTCATGCTAAAGGCAGTGAAGCTGATATTACATATAAAGACAATATAGTAATTAATGAATCGGTAGAAATAGAATCTAATGATGGAGACATGGAAAACTCTGATAGCGATTCGAGAAATACGAAAGACATGTCTGCAAAAAGTAAACCAATATCTGTTATCATAAAACAAGAAAAAGGAGAAGCAGAGAGTGCTTCTTATAGAAGCACTAGTAAATTGGATCAGCTCGTTTGGACTGCCAGTCAAATGATGATGCAGAACAATGAAGATTTAATAAGCAGACATAATGAAGTGGACCAAGAAAAAGTAGTTGAAGCAAAAATGATTTCTCCATCAGTAGAGTTAACTGAAAGAACTGAGAGCAATGAGACTGATTTGGCGAAGCAACAAAACGTCATTGAGATTTCTGGCGTAAAAGCTCCGCTTAATATTAGTGATCTAGAAGTGAAAGTATTCATAGAACAAAATCATGAGACTGTTATAAAGTCACCGCAATCTAATGATGTGTCAAGATCGAAGATACCATTGGAAGATTCTACAGGATTATGTATTGCAGTAGATGCAATAGATCAAAGTACTAAAAGCGAGTTAGAATGTAGTTTTAGCGGGAACTCATTGTCTCGGCGATATAGTCAAAGTAGTTTTGAAAGGAACAAAAGTAATGATAGGTCGTTTGGTAGAATTTCTGAATTGATAAGCGACGAACAGAAGCAAGTTATTGAAACTTATTATACGGTGAATATGTCGGTCGTAAATGTGGAGGAAGTACAAAAACACATAACGGTAGTTGATAAGAGGGATGTGCGCTGCAATATTTGTGGTAGTCTTTACCTCAGAATGGATAAGTGTCAGGTACATATTTGGGGACATTTGCAAATGAAACCCTATCAATGCAAAGCATGCGACTTTGCCACAGTCACTGTTAGTAACGTTCGTTGTCATATTAGGAAAAGTCATTTAAAGATTAAACCATTCGCTTGCCATCTTTGTGAAAAGCGATATGTAACTGCTATGTTATTGAAAGAGCATATTAATACTCATACAGGTGCCCGTCCATATAAGTGCAAACTTTGCGACTTTATAAGCTCAAGTAGACAAATACTGAGCTACCACAACGCTACGCACAAGCCAGTAAAgGATATTCGTTGTAAACTCTGCGGCAAAGAGTTTTATTCGAAAAGCAGATTGCGTGCGCACATGATTGTACACAACAAGGATAAGGCTGTTATGTGTAAATTGTGCTCGTCTTATTTGGCAAATGCAGAATCATTAGAAACGCATCACAGAAATGTCCACATGCAAGATTATGTATGTAACACGTGTGGCAAACGCGTCAAGTCGAGAAAAGCTCTTCACAATCATCAAAATgtTCATTCTGCTGCAAAGTACAAATGTACATTATGCCCAAATGTATATAAGAGCAGCCAAATACTGAAAGAGCATCTTTTAAAGCATAAAGgtattagaaaatacaaatGTAGCGTCTGTGAAAAGTCGTTTGGTCAACAGTCTCATTTGGCTGCTCATATGGCAGTGCATAGTAAAATTAGATTTCATTGTCCTGGATGTGATAAACCTTTCAACCGACAAGACAATATGAAGATACACACCAAACGgtgtaaacaatttttagcGAATCCCGATCTGAAAAATCTTTTAACTAAGAGAGAGAGAACTATATCGTTCAATAATATAGCAGAATTAACAGCGGAACTGAAGCACGAAAATATGTCGAATTCCGTGGCTCAGATTTCTCCAAAAAATCAAAGCAATGACGTTCTAGTAAAGACTGTAGAAGATGAACAAAAGACTGCAATAAATCTCTGTAAATTAGGACTGAATATCTCTTGTATTGAAACAGCGGATAAAACATGGGATCGTAATATGTATAATGATAAAGAAGTTGTGACATCGACtgaaattaatgtaattaaaattacaaatgttaATGGCAGACTGATGCCCGAAACTGAAAATCTGTCAGTTCTTGAGAATATTTTAGCACCGGAGAGTTACTAA
Protein Sequence: MELGEGEAQICRLCGQYESIYIDVFGEEGTKRFLGLKIHTKINITIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLTEIAEVKTEDTPPSTSTNNNNNETNKNLNSPNEESVKQVEHRVLRTATKTQRNLRNQQQVKGNEETTSNQNSIQTTSEDNVDNQQPVQNSETTPTRWLRSRQTTVETVAANQTASDTPIANRLRSHNNAATEITLSPRSSPNENGEKQTAKQVQKQDPHTIQIPTSALNKLVNIVSNSPNMEVSVKESRHQSSDLEDISFTIELCKKESDEVATVRARVFPDQDSCLVDKAIVGLFQNQSCVEMNSIINTIIDSSLMNSNSTKLNDSAEFEEKWQATQNPEELFRIDGEEIRVDDNIEHIVTDNQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYSCTDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLSVLNDHIKTCHATTYTCEVCNKTFKVSSKYKAHVLQHTNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHICQNCGAKFAQASHLAAHRHVHGEKTHACSECGRKFNRRDNMKVHRKRHFEDKKTGVNKPKNVSGGDVASVASNEKGNVYYQIKENDGLPQIVCIRCLGALEFLCDFYERSHLTQKELLEASENGKGGKTQEGDDAEEDKENVAPSLNEAKRKTKILSPESSKSIQKFFIENNMSYYRDGRKEQKGNDLDNSDYAKNTQSVVQTVQLSSVILHDKILKDNQNTTSNLKCRTSLMERKEKKTVLCTTRSLNDMNSSEKNETNVSSELPVRRKRGRKSKLEKMREASLLENLKKEVQGELCGGKSDRDSFNENGKRHCLRDICRNSKSNRMTNNTIISLKRQVEQVIAKKQVPMVNTSLNLAHAKGSEADITYKDNIVINESVEIESNDGDMENSDSDSRNTKDMSAKSKPISVIIKQEKGEAESASYRSTSKLDQLVWTASQMMMQNNEDLISRHNEVDQEKVVEAKMISPSVELTERTESNETDLAKQQNVIEISGVKAPLNISDLEVKVFIEQNHETVIKSPQSNDVSRSKIPLEDSTGLCIAVDAIDQSTKSELECSFSGNSLSRRYSQSSFERNKSNDRSFGRISELISDEQKQVIETYYTVNMSVVNVEEVQKHITVVDKRDVRCNICGSLYLRMDKCQVHIWGHLQMKPYQCKACDFATVTVSNVRCHIRKSHLKIKPFACHLCEKRYVTAMLLKEHINTHTGARPYKCKLCDFISSSRQILSYHNATHKPVKDIRCKLCGKEFYSKSRLRAHMIVHNKDKAVMCKLCSSYLANAESLETHHRNVHMQDYVCNTCGKRVKSRKALHNHQNVHSAAKYKCTLCPNVYKSSQILKEHLLKHKGIRKYKCSVCEKSFGQQSHLAAHMAVHSKIRFHCPGCDKPFNRQDNMKIHTKRCKQFLANPDLKNLLTKRERTISFNNIAELTAELKHENMSNSVAQISPKNQSNDVLVKTVEDEQKTAINLCKLGLNISCIETADKTWDRNMYNDKEVVTSTEINVIKITNVNGRLMPETENLSVLENILAPESY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -