Espl033154.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062872.1:771850-788485[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.16 13 7.4 4.6 1 23 159 181 159 181 0.98 2 13 0.037 3 9.5 4.2 1 23 402 425 402 425 0.98 3 13 3.4 2.8e+02 3.3 1.6 1 23 468 490 468 490 0.97 4 13 0.091 7.5 8.2 0.8 2 23 497 518 496 518 0.94 5 13 0.75 62 5.4 0.4 1 23 524 547 524 547 0.92 6 13 0.89 74 5.1 7.8 1 23 553 576 553 576 0.97 7 13 0.00017 0.014 16.8 3.1 1 23 582 604 582 604 0.98 8 13 2.5e-06 0.0002 22.6 1.1 2 23 611 633 610 633 0.92 9 13 0.026 2.1 10.0 2.4 1 23 641 663 641 663 0.95 10 13 0.001 0.083 14.4 0.4 1 23 669 691 669 691 0.99 11 13 0.011 0.92 11.1 3.2 1 23 697 719 697 719 0.97 12 13 0.12 9.9 7.9 1.3 1 23 725 747 725 747 0.97 13 13 0.0025 0.21 13.1 0.4 1 21 753 773 753 774 0.94
Sequence Information
- Coding Sequence
- ATGGACTATGCCGACCCTCTAGTCAAACTCGAGCCGGGGCTCAGCGACGATGAAAAAGATGGCGATGAAACATTATACTCCGCTGCACATGTCAAGACTGAGATCACTTTGCCACCATTGCCTGCTGAGTTTGAGGCGAGCGCAGATGGAAGCCCTCAATGcacacaaaatgtatttattaaaatggaaaagGATATTGGCGCGGTACATCTTTCTGCCGCGAAACCTGAGCCAGGGTCTGCGGCCGAGAGCGGCGATGAAGGAGAAGGCGGTGGAGTCGTGTATACCGATATAGCCACATCGCTCGCCGATGTCAAGCAGGAATGCTCGGAGCACTCCAAAAATGCTATTCAGCGCGCcgGTCTTCACGATTCTGTTTTGGTATGTCCGAAATTGCCTATGGCTAACACCGGAAAGGAATCAGGTTTGGAGATGTCAAAAAGAAGTAGGATTACCTTCACTGGAATGAAgtcattttcatgttcacagtgcgctTACACATGCAGTGACAAAAGCAGATCAAGAAGAcacatgcttactcacactgcGGAGAAAGCATTTTCATGTTCGGAGTGCACTTATACCTTGACCGGCGCGATGGAGTCAGGTGCCGGAGACGAGCTGGACGTGTGCAGGACCTGCCTGACGACCGCTGCGGGAATggtgtcaatatttaaaatcggGTCGGACGGATCTGTGCCGATAAACGATATGCTATCCAGTTTTTGCAGCATCCAGTTGACAGCAGGGGACGGCCGCACGGAGCGGATCTGCGCCGAGTGCTCCTTGGAGACCCTCAGGGCCTACAGCTTCAAACTCAAGTGCGAGGAGTCGGACGTGATGTTGCGGAGTCGAGCCAAGCTCTGGAATTTCAAACACAAAAATGTGGAAAACATTTTGGCTCCAAAAAAGGAAGATATCGTCacggaaataaaattagaggaAATATCCCAATACAACCTGCCGGTATTAAAGGACGACATTAAAGATGAAGAATTCTCCAATGCCGAGGATGACCACATCGAGGCCGACTACGAAGAGGAGCACATCAGTTCCAAAAGAATGAGACGtgcgaataaaataaatgggaaatgtaaaaagaaaaaaaaatcgctgatgaagaaagaattgaattatttgagTGTGAAGGATGTAAAAGGTGTTAAAAAGGAACAAATCACAGAAcaaggatataaaaaaatATACGAGTGCCCAAAGTGCCATGCCATATTTCAAACATTCCACATGATAAACAAGCACCTGAAGAAACTGCACAACACCGCCGTCGACACGGAGAAACACTTTGATTCTTTTGTCTGCGGTTCCAAACTGCCGGGTCTGAGAGAGGAGCAGTGCCGCGCGGAGGAGCGGATGGACCCGGACAGCGGCAACGGGTCACTGTTCAAGTGCACTGCGTGCAGTTTCACGAGCGAGAGTTTTAAAAAGGTGAAGGCGCACCTGATCAAGCATCGGGGAGACAAGTACATTCAGTGCGACGAATGCGATTATAGATGCTCGCTGGTGGCCAAGCTCATGAAGCACAAGGTGGTGCACACGGGTGAGAGGGCGTACCAGTGCGCGCACTGCCCCTACCGGGCCAGCACCGGCTCCATCCTGCGCACGCACGCGGCCACGCAGCACAGCGAGGAGCGTCCGTACCACTGCGACCGCTGCACCTTCACCTGCAAGCTCAAGATGAACCTGGCGCACCACATAATGCGGACGCACGACAAGGTGAGAACGCACACGTGCCCGCACTGCGGCAAGGCCTTCTTCGGCTCGTACCAGATGAAGATGCACGTGCTGACGCACACGGGGGACAAGCCGCAGGTCTGCGAGCACTGCGGCATGCGCTTCACGCAGAAGTCCAACCTCCAGAAGCACGTGGCGCTCCTGCACAACACGGCGCCACTGCCCGTGCACGCGTGCCAGCTGTGCCCCTACAGAGGCAAGACTCCGCACTCGCTGCGTGTGCACACCAAGCTGCACTCGGGCGAACGCCCGTACAAGTGCGACATGTGCGCCTTCTCCTCTACTTCCCCAGGTGCCCTGCGCCTGCACAGGCGGAGGCACGTGGGTGACGCGCGTCACGTGTGCGCCACGTGCGGCTACCGCTGCTACACGGCCAACAGGCTGCGCGCGCACGAGCGGACGCACACCGGCGAGAGGCCGTTCCCCTGCGACGCTTGCAACTATAGGGCCACAACCAGCCAGCGCCTCAAGAACCACAAGAAGTCGCACGAGAACAGCAAGAGCTACGCGTGCCAGTACTGCCCCTACCGGGCCAACTACCGCTCCAACCTCATCAAGCACCTTCAGAAGAACTGCGGCGCCGGGCAGCGGATATTCTGCCGTAATCCTGACGCGAGGAACAACCCGGTGGAGAAAATTTCTCCGCAGCAGAACGCTGAAAGCCAAGTGAAGTCAGAAACGCAGAATTTCAACTCCAGTCATTAG
- Protein Sequence
- MDYADPLVKLEPGLSDDEKDGDETLYSAAHVKTEITLPPLPAEFEASADGSPQCTQNVFIKMEKDIGAVHLSAAKPEPGSAAESGDEGEGGGVVYTDIATSLADVKQECSEHSKNAIQRAGLHDSVLVCPKLPMANTGKESGLEMSKRSRITFTGMKSFSCSQCAYTCSDKSRSRRHMLTHTAEKAFSCSECTYTLTGAMESGAGDELDVCRTCLTTAAGMVSIFKIGSDGSVPINDMLSSFCSIQLTAGDGRTERICAECSLETLRAYSFKLKCEESDVMLRSRAKLWNFKHKNVENILAPKKEDIVTEIKLEEISQYNLPVLKDDIKDEEFSNAEDDHIEADYEEEHISSKRMRRANKINGKCKKKKKSLMKKELNYLSVKDVKGVKKEQITEQGYKKIYECPKCHAIFQTFHMINKHLKKLHNTAVDTEKHFDSFVCGSKLPGLREEQCRAEERMDPDSGNGSLFKCTACSFTSESFKKVKAHLIKHRGDKYIQCDECDYRCSLVAKLMKHKVVHTGERAYQCAHCPYRASTGSILRTHAATQHSEERPYHCDRCTFTCKLKMNLAHHIMRTHDKVRTHTCPHCGKAFFGSYQMKMHVLTHTGDKPQVCEHCGMRFTQKSNLQKHVALLHNTAPLPVHACQLCPYRGKTPHSLRVHTKLHSGERPYKCDMCAFSSTSPGALRLHRRRHVGDARHVCATCGYRCYTANRLRAHERTHTGERPFPCDACNYRATTSQRLKNHKKSHENSKSYACQYCPYRANYRSNLIKHLQKNCGAGQRIFCRNPDARNNPVEKISPQQNAESQVKSETQNFNSSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -