Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_031772225.1
Location
CM062869.1:15374717-15381671[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.12 10 7.8 2.3 1 21 14 34 14 35 0.93
2 23 0.047 3.8 9.1 0.3 2 23 42 63 41 63 0.97
3 23 0.11 9.2 8.0 2.1 1 23 69 92 69 92 0.96
4 23 0.87 72 5.1 6.9 3 23 100 120 98 120 0.95
5 23 0.45 37 6.1 1.9 1 23 126 148 126 148 0.98
6 23 0.045 3.7 9.2 1.8 1 23 256 278 256 278 0.96
7 23 0.026 2.2 9.9 6.2 1 23 284 306 284 306 0.94
8 23 0.0013 0.11 14.0 4.4 1 23 321 343 321 343 0.98
9 23 0.00046 0.038 15.5 1.0 1 23 362 384 362 384 0.98
10 23 3 2.5e+02 3.5 3.6 1 23 438 460 438 460 0.97
11 23 0.00042 0.035 15.6 3.3 1 23 466 488 466 488 0.99
12 23 0.34 28 6.4 2.7 1 23 494 516 494 516 0.96
13 23 0.0034 0.28 12.7 0.1 1 21 522 542 522 543 0.93
14 23 8.4 6.9e+02 2.0 0.0 3 23 549 569 548 569 0.93
15 23 0.00073 0.06 14.8 2.3 3 23 712 732 710 732 0.98
16 23 0.57 47 5.7 1.7 1 19 762 780 762 783 0.91
17 23 0.075 6.2 8.5 0.2 2 23 790 811 789 811 0.94
18 23 0.8 66 5.3 1.8 1 23 817 839 817 839 0.94
19 23 0.27 23 6.7 1.0 1 23 844 866 844 866 0.96
20 23 1.7 1.4e+02 4.2 0.9 1 23 977 999 977 999 0.96
21 23 1.8e-05 0.0015 19.9 4.6 1 23 1005 1027 1005 1027 0.97
22 23 0.021 1.8 10.2 3.8 1 23 1033 1055 1033 1055 0.96
23 23 0.024 2 10.1 0.4 1 21 1061 1081 1061 1082 0.95

Sequence Information

Coding Sequence
ATGGACCAGCACAACCTCATCCACAAGGGAATAAAACCCTTTGCGTGCACCAAATGCGACTACCGTTGCCGGACTCCATTCGTAATGAAGAAACACCAGGCCAAGTGCAGCAGCGTGAAGACGCGGTGCGAAACGTGCAACAAGAATTTTTTGAAGCCTGGTGCTTTAGCGATTCACAGATTAAAGCATCTCGAACATTTGAAGTTTTCCTGTAGCATGTGTGGGTACTCCACAAAACTGAGGCAGCGGTTCAAGAGCCATCTGGAGAAGGAACATCCAAATAAAAAGGTACACCTTTGTCTGTCGTGCAACTTCACCTGCTCGAAGAGGCGGAAGCTCAAGGAACACATGCTCACTCACGATGGAAGGAAATGGTTTAAATGTGATTCTTGCATGTTTTCGAGTTCCATAAAGAAGTCGCTAAAGACGCATATTCTCACCCACAAAGAAGATCTTACTCATAAATCTGGAAATTCTGTTCAGAATAATGTATTGGAGCAAAATTCTCAAGATATTAAAATGGAACAATCGACGCCTTCGAAAGAAAGTGTTGGGAATGTCAAATCGGACAAAATACACAATGAaactatttacaataaaaattcttcCACTCTTCATACACCAGTAGATCGTAATGAaactactttaaatatttaccaagtTGCAAACAATGACGGACTAAGAATCACCAACGACGTCGATCAAAATGTTACGCAAGCCACAAACCCGACAGAATCGGCCGACACGAAAAACATTGACGGCCTGTTTTACTGCGACATTTGCAACTTTTCAAGCAGAAGGCGTCGCTCCGTCAAGGTCCACAAGCTTCTCCACACGGGCGAGCGCCCCTTCCTCTGCGACCTGTGCCCCGCCACCTACACGAGGAAACACCACCTCCTGAAGCATCGCCACCTGCACTCCACGGCCAAAGAGGGAAAGGAATCCAGAGTGATGAAGATTTATACTTGCAATGTTTGCAGCTTCACCTGTGCGCACAAGGCCAGCCTGCAACGGCACCAACTTCTTCATTCGGAAAACAATCCAAATGGCGGTAATCAGCAGAGTATCGCCAACATGACGAAGTTCCCGTGCAATATTTGCAAGTTGAAATACAGCAAAGAGATTCAGTTGATCAAACATTTAAAGAAACATTTGGAAAAGGGAAATCTGGGAGGATTCCAGTGTGCTCCCGACTCCTGCAAAAGCATGCTGGACCAGTTCATTTACTTCAACGAATTTCAATACAACATACAGCAAGAAGAAATATTGTCCGAACAGTACAAAGACATCTGTAAAAAAATCGACAATATTTATTGTTGCAACCTCTGCGAATTCAcaaccaaaaatttaatttctatcaaAGTGCATCATCTTAtacacactggagaaaaaccgtACAAATGCGACAAGTGTCCAGCCACGTACAGGCGCAAGCAGCACCTCGACATTCACAGAAACAGGCACATGAAAAAGACAATGTACCTGTGCCACTTGTGCGACTTCACCAGCCAGGAAAAGTCCAGCATGGAACTCCACAGGCAGACACACGAGCAggctaatatatttatatgcgacaattgtaaatttactttttcGGACCGTCCCGAACTCGAAGCGCACGAGAAGGAGTGCATTCAGTTGCTGTGCAGCATTTGTgcggaaatatttttagatcaaCAGTCTTTGGAAATGCACGAATTGGGTCACGCAAAGGCACCGCACCGGACAGTCCATCGGACAGATCAAATTAAACCAGAATTGACGGAAGAAGATAGTCTTCTTCAAGAAGTTAACATTAAAGTGGAGACAAGTTATAGCATATCTAACTTTAGTGAAAATGTGGATGATCGACTGGATGACTTCGATCAGGACGATAGCTGCGATGATAACGACAAAGACTATTGTGTCAAGGAGGGTAGCCAACACGACGACTCATCGGacgattcaaaaaaattaaagccaAAACGCAAGGTCAAGCACGATGGCATCATTAGAAAATTTCGACGGAACATAGAGAAGGGACTGAAGGATCTGATGTATCATTGCGATTACTCAAACTGCAATTATTCCAACAAGCGTGTCAATTCTGTAAAAGTACACCGCATGATCCACACCGGAGAACGTCCCTTCGGTTGCGATTTGTGTTCGGCAACGTTCCGACAGAAAGTACACTTGATAAAACACAAAAACACGCACATACCTCACGTTAAAAAAGACAGAAATACCGGCTCAAAAGATTCAAACAAAGATTACAAGGACAGAGATTACAACAACGATGAGTGGTTCGTCTGCTCCAAGTGCGGCTATCGATGTCGATGGAAGATTACGCTCGAGAAGCACGAAACTAAATGCAAATCTGCCGAGCTGAAGTGCAACATGTGCGAGGAGACGTTCCTCAGCCAGAACGAGCTTGTGAGTCATCGAGGCATCCACATTAAACGCAAGATGCACGACTGCGAGTTGTGCGATTTCACGACAGGTAATCTGCTCTACCTAAAGAAGCACACAGTCAAGCACTCGAGGATGCTGTACCTGTGCTACGTGTGCAGCTTTACTTCCGTTTACAAATCCCTCATGCAGGAGCACAGACTTACCCACAAGGAGAATAATGTCGTGGCGAAGGATCTGCAACCTAACTCCATTCAAAACGgttgtgattatttattaagagaAGATGGCCCCTACAATTTGAGTGATAGAAGTGATCTTTTGAAGGCTGCGAAATATCAGGCAACGAAGGATCCTGCTCAAAATACACCCCAACCTGGTCAACCAGCACCACCGTCACCGAATCTAACCGCAACACtgttacataaaaacaaaatgaatcggCTTTACGGTCCGTTCTGCGACTCGTCCCAGGAGCCGAGATCGCAGGGACGTCCGAAGAAATACAAGACGGGAGAGTTCAAAAGGGAAAACGACCTGTACTTTTGCGATTTCTGCGATTACTCCAACACGAGAGTCAACTCGGTGAAGGTGCACAGGATGATCCACACGGACGAGAGGCCATTCTCGTGCGACCTCTGCGACAAATCCTTCAGACAGAAGATGCATCTGAGGAAACATAAAATATCGCACTCGAAAGAGAAGATGTTCGCCTGTGACGAGTGTAAATATACATGTCGGTACAAATCGAGTTTGGATCTACACAAGCTAAAGCACTCTGGTGTGAAACCGTATGTTTgtgataaatgtttgtattcatATCGGACACAACTGGAAATGGAGAGACATGTGAAAAGATgttga
Protein Sequence
MDQHNLIHKGIKPFACTKCDYRCRTPFVMKKHQAKCSSVKTRCETCNKNFLKPGALAIHRLKHLEHLKFSCSMCGYSTKLRQRFKSHLEKEHPNKKVHLCLSCNFTCSKRRKLKEHMLTHDGRKWFKCDSCMFSSSIKKSLKTHILTHKEDLTHKSGNSVQNNVLEQNSQDIKMEQSTPSKESVGNVKSDKIHNETIYNKNSSTLHTPVDRNETTLNIYQVANNDGLRITNDVDQNVTQATNPTESADTKNIDGLFYCDICNFSSRRRRSVKVHKLLHTGERPFLCDLCPATYTRKHHLLKHRHLHSTAKEGKESRVMKIYTCNVCSFTCAHKASLQRHQLLHSENNPNGGNQQSIANMTKFPCNICKLKYSKEIQLIKHLKKHLEKGNLGGFQCAPDSCKSMLDQFIYFNEFQYNIQQEEILSEQYKDICKKIDNIYCCNLCEFTTKNLISIKVHHLIHTGEKPYKCDKCPATYRRKQHLDIHRNRHMKKTMYLCHLCDFTSQEKSSMELHRQTHEQANIFICDNCKFTFSDRPELEAHEKECIQLLCSICAEIFLDQQSLEMHELGHAKAPHRTVHRTDQIKPELTEEDSLLQEVNIKVETSYSISNFSENVDDRLDDFDQDDSCDDNDKDYCVKEGSQHDDSSDDSKKLKPKRKVKHDGIIRKFRRNIEKGLKDLMYHCDYSNCNYSNKRVNSVKVHRMIHTGERPFGCDLCSATFRQKVHLIKHKNTHIPHVKKDRNTGSKDSNKDYKDRDYNNDEWFVCSKCGYRCRWKITLEKHETKCKSAELKCNMCEETFLSQNELVSHRGIHIKRKMHDCELCDFTTGNLLYLKKHTVKHSRMLYLCYVCSFTSVYKSLMQEHRLTHKENNVVAKDLQPNSIQNGCDYLLREDGPYNLSDRSDLLKAAKYQATKDPAQNTPQPGQPAPPSPNLTATLLHKNKMNRLYGPFCDSSQEPRSQGRPKKYKTGEFKRENDLYFCDFCDYSNTRVNSVKVHRMIHTDERPFSCDLCDKSFRQKMHLRKHKISHSKEKMFACDECKYTCRYKSSLDLHKLKHSGVKPYVCDKCLYSYRTQLEMERHVKRC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-