Basic Information

Insect: Eubasilissa splendida
Gene Symbol: ZIPIC
Assembly: GCA_031772225.1
Location: CM062865.1:21127981-21129362[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.5 1.2e+02 4.4 2.1 1 23 122 144 122 144 0.93

2 8 7.8e-06 0.00064 21.0 0.1 1 23 150 172 150 172 0.98

3 8 2.7e-05 0.0022 19.3 0.8 1 23 178 200 178 200 0.98

4 8 7.3e-06 0.0006 21.1 1.1 1 23 206 228 206 228 0.98

5 8 0.073 6.1 8.5 0.0 5 23 238 256 237 256 0.96

6 8 0.00031 0.026 16.0 1.7 1 23 262 284 262 284 0.98

7 8 0.00076 0.062 14.8 1.9 1 23 290 312 290 312 0.99

8 8 0.0024 0.2 13.2 1.2 1 23 318 341 318 341 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.5	1.2e+02	4.4	2.1	1	23	122	144	122	144	0.93
2	8	7.8e-06	0.00064	21.0	0.1	1	23	150	172	150	172	0.98
3	8	2.7e-05	0.0022	19.3	0.8	1	23	178	200	178	200	0.98
4	8	7.3e-06	0.0006	21.1	1.1	1	23	206	228	206	228	0.98
5	8	0.073	6.1	8.5	0.0	5	23	238	256	237	256	0.96
6	8	0.00031	0.026	16.0	1.7	1	23	262	284	262	284	0.98
7	8	0.00076	0.062	14.8	1.9	1	23	290	312	290	312	0.99
8	8	0.0024	0.2	13.2	1.2	1	23	318	341	318	341	0.97

Sequence Information

Coding Sequence: ATGCTCTGCACAGGAGTACAGATGCATCACAATGACGGCCTATCAGGCATCATTTGTGAAAACTGCTCCGGAGAGCTAGAGGCCGCTAACAGCTTCAGGGTCAAGTGCGAGAATTCTGATACACTTTTAAAGAAATTCTACCTCAATGACGTCCTCAACGGAGCCATCGCTGAAAATATTACATCTCCGAAAAAAATGCCTGGATTAGTAAAGGGAGAAGTGGTTGCACCTTATGAGCCGTGGATTAAACTTGAAGACAAAGATGTAGacaatACGTCTCTTGAGCGCCACACAATTTGCGTGCACAGCGAGGAGAAGAACCAGCGAAGGTGCAACATCACCGGCTACGGAGTAAACAAGAGGTTTCACTGCATAGAATGCCCGTACTCCACACCGCGTCGGCAGACCATCAACTATCACTCGAGGACGCACACCGGAGAGAAGCCCTACCAGTGCGACATCTGCGACGCCAGGTTTTCTCAGCCCGGAAGTCTCATCGGCCACACCAGGTTGCATAGCGATAAGATGTACTACACTTGTCCCGAGTGCGGAAAACCGTTCAAACTCAAACAGAGGTATGAACGTCATAAACTCGTGCACagcagtataaataaatacatctgcaCCGTGTGCAACAAAGGCCTTAAAACTAAGAAATCCCTCGAGAAGCACATCAACAGACACCTGAACATCCGAAACTACAGCAGCGATACTTGCGGAGTTACATTTGTGGCTCTGGAAGAATTAATTAACCACGCACGGAAGCACAGTGTCTTAAAAAAATTCGAATGCAATATCTGCCAATTTCGGACCAGACTGAAACCGACCCTGCAGAAGCACATGATGCGACACACAGGAGAAAAGAAATTCAAATGTGATCTGTGCCAATTTAGCGCGTACGACCGCGGGACGCTGACGAGGCACACTCGCAAGCACACCCGAGAGAAGCGGTACTCTTGTCCTGTCTGCGACATGAAGATGATCCACAGCACGAGCGTTAACCGCCACATGATGAGGACGCACGGGATAAAATATACCCTAAATGATCACGCCGGTAGACGGATAATAAAGAAACAGACTCCCCTTATTCTTTATATGGCCGTTTAA
Protein Sequence: MLCTGVQMHHNDGLSGIICENCSGELEAANSFRVKCENSDTLLKKFYLNDVLNGAIAENITSPKKMPGLVKGEVVAPYEPWIKLEDKDVDNTSLERHTICVHSEEKNQRRCNITGYGVNKRFHCIECPYSTPRRQTINYHSRTHTGEKPYQCDICDARFSQPGSLIGHTRLHSDKMYYTCPECGKPFKLKQRYERHKLVHSSINKYICTVCNKGLKTKKSLEKHINRHLNIRNYSSDTCGVTFVALEELINHARKHSVLKKFECNICQFRTRLKPTLQKHMMRHTGEKKFKCDLCQFSAYDRGTLTRHTRKHTREKRYSCPVCDMKMIHSTSVNRHMMRTHGIKYTLNDHAGRRIIKKQTPLILYMAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -