Basic Information

Insect: Eubasilissa splendida
Gene Symbol: Znf516
Assembly: GCA_031772225.1
Location: CM062859.1:6296019-6297560[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.67 56 5.5 0.4 2 23 168 189 167 189 0.96

2 10 0.00018 0.015 16.7 6.4 1 23 195 217 195 218 0.94

3 10 3.4e-06 0.00028 22.1 1.5 1 23 248 270 248 270 0.98

4 10 3.7e-05 0.0031 18.9 3.4 1 23 276 298 276 298 0.99

5 10 0.0095 0.78 11.3 3.0 1 23 304 326 304 326 0.95

6 10 2.7e-06 0.00022 22.5 0.6 1 23 332 355 332 355 0.97

7 10 1.3e-05 0.0011 20.4 0.1 2 23 362 384 362 384 0.95

8 10 0.0011 0.094 14.2 1.9 2 23 390 408 390 408 0.97

9 10 0.00011 0.0094 17.4 1.5 3 23 416 436 414 436 0.98

10 10 5.4e-05 0.0044 18.4 2.4 1 23 474 497 474 497 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.67	56	5.5	0.4	2	23	168	189	167	189	0.96
2	10	0.00018	0.015	16.7	6.4	1	23	195	217	195	218	0.94
3	10	3.4e-06	0.00028	22.1	1.5	1	23	248	270	248	270	0.98
4	10	3.7e-05	0.0031	18.9	3.4	1	23	276	298	276	298	0.99
5	10	0.0095	0.78	11.3	3.0	1	23	304	326	304	326	0.95
6	10	2.7e-06	0.00022	22.5	0.6	1	23	332	355	332	355	0.97
7	10	1.3e-05	0.0011	20.4	0.1	2	23	362	384	362	384	0.95
8	10	0.0011	0.094	14.2	1.9	2	23	390	408	390	408	0.97
9	10	0.00011	0.0094	17.4	1.5	3	23	416	436	414	436	0.98
10	10	5.4e-05	0.0044	18.4	2.4	1	23	474	497	474	497	0.96

Sequence Information

Coding Sequence: atgggAGATAATATCCAGACTTGCCGAGTATGTTTAACAGAAAACGACAAAAGCGCttcaatatttgataaaaagaaTTCACGAAAATGCAGTGATTTGCTACAAGAGTATTTGGGGTTAGAAGTAGTTGAAAATGATAATCTTCCAACTGGTATCTGTAATGAATGCTCATCAGAGTTGACTATAgctgtaaaatttatttccaagtTCCGAATATCAAATGAGAAATTGAAAGATGCTTTAGATTTAAAAGTTCCATTTTACAGACTTTTATCGAATTATATCAAAGAAGAGGATGATGAAGAAAACTTACCGCTCAGTATTGTTAGTGCAACCATTAAAGTTGAAAAGGCGGAAATGTCCGACATAGAAAATTCTACAGATAATATGTTTTATGGCAACAATCAtagagaaaatgaaaaaataaaatccgaATCTAATAATACACAGTATGAAATTTTAAGATCTAGGGATCATCATGGCCTTAAGAAGGATATGGTGCAATGCTTGACTTGCGGACTATTAGTACAAAACCGATCGGCATTCTTTATTCACAATAGAAAGCACACAGGCGAAAAGCCGTGCAAATGTCCACATTGCGCGAAGAGTTTTACTCAAATGGGAACACTCACTGACCACATAAAGAGGCATCATTTACACGATAAGAGTTTTATCAATGCAGCAGATTTAACAGAACGCATTAGACGAAAACAAAAGGAAAAATATGGCTATGAGAAGCGTTACATCTGTGATACTTgtggaaaacaattttttaaaaagaattatttaactGTTCATATGCGCGTGCACACCAAGGAGAAGCCGTATCAATGTACGTATTGTCCCAAAGGCTTCAGACGATGTATCGACTTCATCCAACACAAACGGATCCACACAGGAGAAAAGCCATACTCCTGCCATATCTGTGGGAAGAGGTTCTTAGCACATACTCCGTTAAAAAGGCATCTCACCGTACACTCGGATGAAAGGAAATACAAGTGCAACATATGCAACACATCAGTAAAATCAAGCGATTCTTTGAAGAAACATATCCTCGTAATGCACACTTCGGAGAAGCGCAATGTATGCACGGTGTGCGGGGCCGCCTTTGCTATGAAGTATAACCTCACGGCCCACATGAGAGCCCGGCATTCGGAACGTTCCGGAACGTGCGATGTTTGCAAAAAGTCCTTCTCAAATTTACTCAAACATATGAATACACATTCTAGCGAAAAACCATTCGGTTGCCAAATGTGTAGTAAAAGGTTTTTCCGCCAGAAGGGACTGACTGCACACATGGAAAAACACCAAAATGAGAGCGCCACCTTTGCATGttcttttgaaaattgtaattctGCCTTTTCCAAGCAGTGCAAATTAgactttcacattttaaagtatCACAGCAATCACACGCCTCACGTTTGTCAGTATTGCTCTAAAGGATTTTATCGTTTACCAGATTTAAGACGACACTTAAAATCCAGCCATGAAAAAATACCTGAACCACAAATTTCTAATAACTTTACTATAGGcatttaa
Protein Sequence: MGDNIQTCRVCLTENDKSASIFDKKNSRKCSDLLQEYLGLEVVENDNLPTGICNECSSELTIAVKFISKFRISNEKLKDALDLKVPFYRLLSNYIKEEDDEENLPLSIVSATIKVEKAEMSDIENSTDNMFYGNNHRENEKIKSESNNTQYEILRSRDHHGLKKDMVQCLTCGLLVQNRSAFFIHNRKHTGEKPCKCPHCAKSFTQMGTLTDHIKRHHLHDKSFINAADLTERIRRKQKEKYGYEKRYICDTCGKQFFKKNYLTVHMRVHTKEKPYQCTYCPKGFRRCIDFIQHKRIHTGEKPYSCHICGKRFLAHTPLKRHLTVHSDERKYKCNICNTSVKSSDSLKKHILVMHTSEKRNVCTVCGAAFAMKYNLTAHMRARHSERSGTCDVCKKSFSNLLKHMNTHSSEKPFGCQMCSKRFFRQKGLTAHMEKHQNESATFACSFENCNSAFSKQCKLDFHILKYHSNHTPHVCQYCSKGFYRLPDLRRHLKSSHEKIPEPQISNNFTIGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -