Basic Information

Insect: Eubasilissa splendida
Gene Symbol: Sall1
Assembly: GCA_031772225.1
Location: CM062863.1:24505835-24507703[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00011 0.0093 17.4 1.3 1 23 159 181 159 181 0.97

2 15 0.04 3.3 9.4 3.4 1 23 187 209 187 209 0.96

3 15 5.1e-05 0.0042 18.5 5.3 1 23 215 237 215 237 0.98

4 15 0.014 1.2 10.8 1.3 1 23 242 265 242 265 0.93

5 15 0.00071 0.058 14.9 1.1 1 23 300 322 300 322 0.95

6 15 0.063 5.2 8.7 0.5 3 23 330 350 328 350 0.94

7 15 0.00013 0.011 17.1 1.5 3 23 358 378 356 378 0.95

8 15 0.92 76 5.1 5.6 1 23 383 406 383 406 0.93

9 15 0.0017 0.14 13.6 0.8 1 23 413 435 413 435 0.94

10 15 5.6e-05 0.0046 18.3 2.7 2 23 439 460 438 460 0.97

11 15 0.0033 0.27 12.8 0.2 1 23 470 493 470 493 0.96

12 15 7.6e-05 0.0063 17.9 0.2 1 23 499 521 499 521 0.94

13 15 0.00027 0.023 16.2 0.3 2 23 528 549 528 549 0.97

14 15 0.15 13 7.5 0.4 1 23 555 578 555 578 0.78

15 15 0.077 6.3 8.5 2.5 3 23 585 605 584 605 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00011	0.0093	17.4	1.3	1	23	159	181	159	181	0.97
2	15	0.04	3.3	9.4	3.4	1	23	187	209	187	209	0.96
3	15	5.1e-05	0.0042	18.5	5.3	1	23	215	237	215	237	0.98
4	15	0.014	1.2	10.8	1.3	1	23	242	265	242	265	0.93
5	15	0.00071	0.058	14.9	1.1	1	23	300	322	300	322	0.95
6	15	0.063	5.2	8.7	0.5	3	23	330	350	328	350	0.94
7	15	0.00013	0.011	17.1	1.5	3	23	358	378	356	378	0.95
8	15	0.92	76	5.1	5.6	1	23	383	406	383	406	0.93
9	15	0.0017	0.14	13.6	0.8	1	23	413	435	413	435	0.94
10	15	5.6e-05	0.0046	18.3	2.7	2	23	439	460	438	460	0.97
11	15	0.0033	0.27	12.8	0.2	1	23	470	493	470	493	0.96
12	15	7.6e-05	0.0063	17.9	0.2	1	23	499	521	499	521	0.94
13	15	0.00027	0.023	16.2	0.3	2	23	528	549	528	549	0.97
14	15	0.15	13	7.5	0.4	1	23	555	578	555	578	0.78
15	15	0.077	6.3	8.5	2.5	3	23	585	605	584	605	0.96

Sequence Information

Coding Sequence: ATGCCGgataatatttgcaaaacatGTTTGGAAAAAGTTTACAACTCGTACAATTTCAGAATACAGTGTGAAGATGCTCACGCTCTACTCGACAACTGCATCAGCTGCTTTTATGAACAGGTTGAAAATATTTCCCAAGACGATAATTTGAATACTGATGAAACAATCTTGATCATTTTACCCGAAGATAAGTGTGAAGCTGAAGTCAAACCAGAAACGGTTAAACCTGacaaatgttttctaaaatcCGAACCCGAAGAAGATATTCCTTTGAAATCAGATGTACACGATTCTACAAAAGAACATTCCTTCAACTTCGACGATTTAAATTTGGAACCAAAGGCAAATTTTCTTAGTCCTGTCGAAGACCGAAACggtgaaatattgaaaacattgcTGAAGACAGTTGCCAACGATAAAAAATCCCAATTCAGTAAAGTGTTGAAGTTTGaggatgagaaaaaaaaaaaaatatttgattgtacaATATGTTTAGAAAGTTTTTATAGTAAACTGGAATTGCAACGGCATCAGAAATCCCACCCGGAAGATTCCCGGCACATTTGTAAGGTTTGCTTCAAGTCGTACAGAAAGTTGAGTATTCTGAAGCGACATTCCATCACTCACTCGGGCAGTAAACACTTTAAATGCTACGAGTGCggaaaatctttttttcatcGAAACGCTTTGAGGTCTCACACACGATATCATCAGGACAAGAAGTACGCCTGTAAATTGTGCCAAACCAAGTTTTATTTTCGCTACATGTTAATAGAACATCTGACTGAAAATCACTGGGAGGAATACACTAAATCCGGGGAAGATTTAATGTTAATCGGAAGCGTAGTCAAGGAAGAAATTAATAGCGACAACGAGACTGCCACTGTAAAAGTAGAATATGACTGTACAATGTGCACTAAAACATTCTACAGCGAAAAAGATTTATATGCGCACAAAATTTTACATCCGGAAGGTACGCGACACCTGTGTAGAATATGCGGAAGATCGTATTTAGAAGTTGGCACTTTAAACCGACACATGATTCTGCACACAGGCAAAAAGACACATCTCTGCACTGTTTGCGGAAAATCTTTTTACTACAGAAATGTACTGAAAGCTCACATGATCTACCACAGTGAAAAAAAGCACGCGTGCCAACTTTgcgataaaaaatttcacacaacTCACATCTTACGCGAGCATGTGAGATTGACACACTCCGAAGACAGGTACAACTTCATGTGCGAAATCTGCGGGAAGCTTTGCAGCTCGCGCAGCCGGTTGATAATTCACCGGGACGGTCACAGCAAGATATCCTGTACACAGTGTGGCAAGAGTTATAAAAACATGCGATATTTCAAAGACCACATGAAAAAACACAAAGGCACGGTAGTTAAAAAGAAGCAGTTCATCTGCGATTACTGCGGTGAATCCAGGAGTCTCAAGACACTTTTAGAGCTCCACATTTTAAGCAAACATCTCAATGAGCGCAGGTACACTTGCAGTGTTTGCGGCAAAGGATTTTTCAGCAAAGGAAGCTTAAACGAACATGGCGTCGTTCACACGAAGGAACGTCCAGAAGAGTGCAACATTTGCGGTAGGCGTTTAATCAATAAGAAagcattagtactgcatcagcGGCTTCACACCGGTGAGAAACCATTCCCCTGCACGATATGCGGAGAAAGCTTCCTATCCACGAGTCGAAGACTAGTTCACGTTAAAAGTAAACACAGCGAGAGAACAGAACACTGTGTCATCTGCCAGGCCAAGTTCCATCTACGCAGCGATCTCAACAAGCACTACGCTGTTCATACGAAAGAAAAGAAATCGAAGATCGACGAGGTTTTTAGTATTATaacttcttaa
Protein Sequence: MPDNICKTCLEKVYNSYNFRIQCEDAHALLDNCISCFYEQVENISQDDNLNTDETILIILPEDKCEAEVKPETVKPDKCFLKSEPEEDIPLKSDVHDSTKEHSFNFDDLNLEPKANFLSPVEDRNGEILKTLLKTVANDKKSQFSKVLKFEDEKKKKIFDCTICLESFYSKLELQRHQKSHPEDSRHICKVCFKSYRKLSILKRHSITHSGSKHFKCYECGKSFFHRNALRSHTRYHQDKKYACKLCQTKFYFRYMLIEHLTENHWEEYTKSGEDLMLIGSVVKEEINSDNETATVKVEYDCTMCTKTFYSEKDLYAHKILHPEGTRHLCRICGRSYLEVGTLNRHMILHTGKKTHLCTVCGKSFYYRNVLKAHMIYHSEKKHACQLCDKKFHTTHILREHVRLTHSEDRYNFMCEICGKLCSSRSRLIIHRDGHSKISCTQCGKSYKNMRYFKDHMKKHKGTVVKKKQFICDYCGESRSLKTLLELHILSKHLNERRYTCSVCGKGFFSKGSLNEHGVVHTKERPEECNICGRRLINKKALVLHQRLHTGEKPFPCTICGESFLSTSRRLVHVKSKHSERTEHCVICQAKFHLRSDLNKHYAVHTKEKKSKIDEVFSIITS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -