Espl027095.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062865.1:14800825-14816965[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.15 13 7.5 1.8 2 23 195 217 194 217 0.90 2 24 0.32 26 6.5 0.0 1 23 225 247 225 247 0.91 3 24 1.8 1.5e+02 4.1 0.1 1 23 257 279 257 279 0.95 4 24 9.9 8.2e+02 1.8 4.7 3 23 301 321 299 321 0.97 5 24 0.11 8.8 8.0 0.1 1 23 327 349 327 349 0.98 6 24 0.00051 0.042 15.3 0.3 1 23 355 377 355 377 0.98 7 24 0.26 22 6.8 0.3 2 23 382 404 381 404 0.90 8 24 0.014 1.2 10.7 1.4 1 19 410 428 410 431 0.94 9 24 0.057 4.7 8.9 3.4 1 23 502 524 502 524 0.99 10 24 0.015 1.3 10.7 0.6 1 23 533 556 533 556 0.94 11 24 0.059 4.9 8.8 1.5 1 23 562 585 562 585 0.94 12 24 0.018 1.4 10.5 4.4 1 23 622 644 622 644 0.97 13 24 1.3 1e+02 4.6 0.3 1 23 650 672 650 672 0.89 14 24 0.0083 0.69 11.5 3.8 1 23 676 698 676 698 0.98 15 24 0.01 0.82 11.3 0.4 2 23 705 727 704 727 0.96 16 24 0.68 56 5.5 0.6 1 10 733 742 733 752 0.90 17 24 0.081 6.7 8.4 0.2 1 23 825 847 825 847 0.97 18 24 0.13 11 7.7 2.6 1 23 854 876 854 876 0.98 19 24 0.041 3.4 9.3 0.5 1 23 882 904 882 904 0.95 20 24 0.0042 0.35 12.4 2.2 1 23 910 932 910 932 0.96 21 24 0.002 0.16 13.5 0.2 1 23 938 961 938 961 0.91 22 24 0.00027 0.023 16.2 0.6 1 23 967 990 967 990 0.97 23 24 0.0011 0.089 14.3 0.1 2 23 995 1017 994 1017 0.94 24 24 0.0011 0.09 14.3 0.9 1 23 1023 1046 1023 1046 0.97
Sequence Information
- Coding Sequence
- ATGGCCGATTTACAATACAAAACGGCCCTACAGAGGGGGTTTCTGGACCCTGCCGACTTCGAACTGGTCTGCAGGGTATGCCTCAAGACCGCGCAAGTCCAGTTGCAGTCAATATTCGCGTACAAAGTGTCGTCAGAGCGGTTCCCGCAGAATCTCACCAACAAAATCAAGATATGCTCCGGCTTCGGCGTCGAGGTCGGTGACGGCTTTCCCGGCAAGATCTGCGGGAAGTGCTTTCAGTTGTTGACAGCCGCGTACGCCTTCAGGACGTTGGTCGAGAACAGTTATAACATCCTTAGAAACTCGCTACTGAAAACCAAACAATCCAATGACAAAATCCTGGAATGCAGGAATGAAATCACTTTTAGTAAAGAAAATCATGAAACAAGTGACATCTGGAGACCAGGACTTCGCGGTAAGGGTGATTCTGTGAAAGAGATCAAGCTTGAAAATACGGATGCATTAGATACAGCTTGTGATAATGCTCCTAATTTTGATGATAGTGATGAAGAGGACGATTGTGCGAAGAGTAATGAAGACGGATTTGAGAGCGATAAAGATGGCGTACGTACCACCATGAAGAAGTGTACATCGTGCAGGCTGGAGTTCAGGTCCATGACCACGCTGAAGAGGCACCGCGTCGAGGAACATGCCTATGATGATGATAACGGGTTCTACTGTTATGGGTGTGACGAAGTGTACGCGAGCGAAGCGGAAAGGGAGGCCCACGAGGAAGGCCATTGCAAGAATATGCCGGCGGGGACAAAATATGTTTGCAGACTCTGCCCCGGCATTTTGGACACCCGCAAGGAGTTCAATATCCATTTGGAAGGGCACAAAACCAAGAAGGGCACAGACAATAATGATGGTAAAGACGACCAGATACCAAAAGTAATGGCTTGTCACGAGTGTTCCTTCAGCTCGGATCACACGGAACAGTGGCACGCTCACCGCCTGAGACATCGAGGGCTGCGACCTTACGCCTGCCCCTCTTGTCCCTTTCGAACTGACATCAAGGGCTCGCTCGTGACGCACGTGCGTCGCCACTCTGACGCGCGTCCTTACCCCTGCCCGCAGTGCTCCTACCGCACCAAGTTGCCCAGCAGTCTCACCCTTCACATGAAGGGCCACTGTGATTGGGACAAGTGCGCGACGTGCCATGAGGACTTCCCCAATCTGCAGACGCTGCTCGACCACGTGACTGCTGAGCACGGGGGACTCAAGTTCTACTCCTGCACCACGTGCGGCAACTGTTACACATCTACCACCGGTCTCAATCGTCACGCCGATAAGTGCAGGGAGTCGGACTCTGAcaatgaagaagaagacaaaTTAGACTCTGCTGATGTAGATGACGGCGCTCAGCAGGATGACGAAGATGAGAAACCTCTGACGGAAATCAAAATAGAACAAATCAAAGAAGAACAGAGAGATTTAGAATATGCCCGCCAGGAGGCAAGTGAAGAGAGCGGGGACGAGCATTACAGGGCCATGAGAAATGTTTTCCGGTGCCCCGTGTGTCCCTTCCACACACAGTTCCCCAAGAATTACCGGATACACAAGAAGACACACCTCCCAGCGGGTGGAGCAGGCGAGCACAGGTGCTTGATGTGCGAAGCGGACTTCTGCGACCAGGGCGATCTGCAGGAGCACGTGACGGTGGCTCACAAGCGCGCCGACAGCTATCCATGTTTCAAGTGCGGCGCATTCTTCAAATGGCGCAGCGGGCTCATGCGGCATGCCAAGGGCTGCCATGCCAAGCCCAATCGGACGGGAAAGGATGAAGATTCAACAGATCCGCTCTCCACCGAGTCAGCGGAGATCTTAGCAGGGGATGCAAAAGACGAAGTCTCCAAGCTGAAACACGAATGCCGGAAATGCGGTATCACGTTTGATAAGAAGTGCGCACTGGACCAACACGAGCGAAGGCACGTGAGCCCGGGTGTATTTGCTTGCCCGCACTGCCCCCGGCGATCGCTCACGCTGGAGCTGGCGCGTGCGCACCGTGCCACACATGCCAATCTTTACTCATGCGCGCACTGTCACTATCAGACTAGGTTTCCTGCCAGCCTGGAGAAGCACGCGCGGCGACACGCGGGCCGCAAGCAGGTCAAGtgcaGCATGTGCGACAAGAGCTACCTAAGTAAGGATGGCCTGCGCTACCACGTGGCCACCACTCACAAGGAGCAACGGCGCTACCCTTGCAAGAAGTGCGGCAAGGTGTACCTGAGCACGAGCGGCCGACACTATCACACAGCCATCTGCAAGGCCAAGTCTCCCGATGATAGGGGGAAGAAAAGCTCCACATCAAGAAGTTCCCAAGGCAAGGAAAGTTCCTTATCGAAAAGTGTCCAAAGCAAGGAAACCTCATTATCAAAGAGCAAGGAGCTCATTCCGAGGGTGGGGCGTGTTAAAGACAGTAGTGCTCCGCGTCCGCCCAAAAGAAAAAAGACCAGACCCGGTCCACAAAAGTTCATGTGTGAGATGTGCGGCTTGGTGCTGGGCACGCCGTCCGCACACCGCCAGCACATGGCTCGCCACGCAGGCAAGTATCGCTGGTACACGTGCGAACGTTGCCCGTTCAAAACACGCCATTCGGAGATGATTCGCGCGCATCGCCTGCGTCACGATGGCCTCAAGCCTTTTGCGTGTCAGAAGTGTCCCTACCGAACTGACTTGAAGAGCTCTCTGTCCAAGCACGAGATGGCGCACGCGGGTGATCTCAGGCACGCCTGCAAGCTGTGCCCCTTTCGCTCCGTCAACACGGGGAACCTCAAAAGGCATATGACCAAGCACACGCAGGAGAAACCGCACCAGTGCTCGTTGTGTGACAAAGCATACGTTGACAAACTAAGTCTGAAGGATCACGTGGCCGCCGTTCATGAGGGCCTGAAGCCCTACGCGTGTACCATATGTGGCGGATCTTACACCAGGAGACGCGGTCTTCTCAAGCATACCAAGAGACTCCACCCGGAGACACTCAAGTGCGTGATGTGTGACAAAGCGTATGTCGACAAAGCGACTCTCAAGGACCACGTGGCCTCAGTGCACGAGGGACTGAAGCGCTACGCCTGTCAAATCTGCAGCGCATGCTACGCCAGGAGTGGCGGACTCAGTAGACACAGGAAAAAGTGGCACCCCGACGATCCGACACAGCGAACGAGATCGTCTTTTCTGACACAGCcttaa
- Protein Sequence
- MADLQYKTALQRGFLDPADFELVCRVCLKTAQVQLQSIFAYKVSSERFPQNLTNKIKICSGFGVEVGDGFPGKICGKCFQLLTAAYAFRTLVENSYNILRNSLLKTKQSNDKILECRNEITFSKENHETSDIWRPGLRGKGDSVKEIKLENTDALDTACDNAPNFDDSDEEDDCAKSNEDGFESDKDGVRTTMKKCTSCRLEFRSMTTLKRHRVEEHAYDDDNGFYCYGCDEVYASEAEREAHEEGHCKNMPAGTKYVCRLCPGILDTRKEFNIHLEGHKTKKGTDNNDGKDDQIPKVMACHECSFSSDHTEQWHAHRLRHRGLRPYACPSCPFRTDIKGSLVTHVRRHSDARPYPCPQCSYRTKLPSSLTLHMKGHCDWDKCATCHEDFPNLQTLLDHVTAEHGGLKFYSCTTCGNCYTSTTGLNRHADKCRESDSDNEEEDKLDSADVDDGAQQDDEDEKPLTEIKIEQIKEEQRDLEYARQEASEESGDEHYRAMRNVFRCPVCPFHTQFPKNYRIHKKTHLPAGGAGEHRCLMCEADFCDQGDLQEHVTVAHKRADSYPCFKCGAFFKWRSGLMRHAKGCHAKPNRTGKDEDSTDPLSTESAEILAGDAKDEVSKLKHECRKCGITFDKKCALDQHERRHVSPGVFACPHCPRRSLTLELARAHRATHANLYSCAHCHYQTRFPASLEKHARRHAGRKQVKCSMCDKSYLSKDGLRYHVATTHKEQRRYPCKKCGKVYLSTSGRHYHTAICKAKSPDDRGKKSSTSRSSQGKESSLSKSVQSKETSLSKSKELIPRVGRVKDSSAPRPPKRKKTRPGPQKFMCEMCGLVLGTPSAHRQHMARHAGKYRWYTCERCPFKTRHSEMIRAHRLRHDGLKPFACQKCPYRTDLKSSLSKHEMAHAGDLRHACKLCPFRSVNTGNLKRHMTKHTQEKPHQCSLCDKAYVDKLSLKDHVAAVHEGLKPYACTICGGSYTRRRGLLKHTKRLHPETLKCVMCDKAYVDKATLKDHVASVHEGLKRYACQICSACYARSGGLSRHRKKWHPDDPTQRTRSSFLTQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -