Espl020383.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eubasilissa splendida
Gene Symbol
-
Assembly
GCA_031772225.1
Location
CM062859.1:6287628-6289193[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 2.8 2.3e+02 3.5 0.1 2 23 165 186 164 186 0.93
2 10 0.00015 0.012 17.0 7.0 2 23 193 214 192 215 0.93
3 10 0.0003 0.025 16.0 0.2 1 23 244 266 244 266 0.98
4 10 0.001 0.085 14.4 3.1 1 23 272 294 272 294 0.99
5 10 4.7e-05 0.0039 18.6 2.2 1 23 300 322 300 322 0.98
6 10 1.7e-06 0.00014 23.1 0.8 1 23 328 351 328 351 0.97
7 10 8.7e-06 0.00072 20.9 0.1 3 23 359 380 358 380 0.96
8 10 0.00043 0.035 15.6 1.8 3 23 387 404 386 404 0.97
9 10 0.00044 0.036 15.5 1.4 3 23 412 432 410 432 0.97
10 10 2.3e-06 0.00019 22.7 0.2 1 23 470 493 470 493 0.96

Sequence Information

Coding Sequence
ATGGTTGATTATATTCGTTCAACTTGTCGAGTATGTTTAATGGAAGGTAACCAAAAAGTTTCTATGTTCGAGAGCCAGGATAAAGCCAAGTATAGCGATCTGATGAAAGAGTATACAGGTTTGGAAGTGGTCCAAAATGATAACCTCCCGACTAGTATTTGTGATCTTTGTTCATCGGAGCTTATGGTTGTTATTAAGTTTGTCTCTAAATTTAGGACGTCCAGTGAAAAGCTCAAGGACGCTCTTCATTTAAATGTGCCCTTTACGAAGATTTTAGCGAATTTAGTTAAAGATGAAGACGAAGACAATTTACCCTTAAGTATCGTAAGTAATGCCATAAAGGAAGAAGTCGGATTTTCGGATGCGGATGACACTTcggacatattttttcaaaataatcaaagtGATGATGAGAAACCCCTAGAAAAAAAATCCACATTAAGCTACAGAATTGCAAAATCTAACGAATATGGTCTCAAAAAAGACATGGTTCAGTGTTTAGCATGTGGCTTGCTGGTCCAAAACAAATCTGCCTTCGCAGTTCATAACAGGAAACATACGGGGGAAAAGCCGTGCAAGTGTGTCCAGTGCGGTAAATGCTTTACACAGATGGGATCTCTCAATGACCACATCAAAAGGCATCATTTGAGGGACGGCTTTGACAAAAATGGAGCACTCGCTGAATCTGTGAAAAAAATGCGAATGAAAGATAAATTTGGCGAATATCGGTTCACCTGTGACGCTTGTGGGAAGAGGTTCTGGAAAAAGGGGGCCCTGACGATTCATCTCCGTGTTCACACAAGAGAAAAACCGTACCAATGCTTGTACTGTCCAAAACGATTTGCGCAATACTCTGAACACCAACAACACACTAGGATACATACAGGGGAAAAGCCATATTCCTGTCACATTTGTGGAAAGTCATTTGTAGCGCACACTCCTTTGCGGCGACACCTCACTGTCCACTCTGATGAACGAAAGTACAAATGCAATATGTGCGACACGTCTGTTAAGTCGAGTGACTCTCTCAAAAAACACATGCTCGTTATGCACACTACCGAGAAGCACAACATATGCGAATTGTGCGGTACAGCTTTCgctatgaaatataatttaaaggcTCACATGAGGGCCCGGCATTCTGAACGCTCGGGAATTTGCGACATTTGTAAAAAgtcattttcaaacttatataaaCATATGAGGACTCACTGCAGCGAGAAGCCGTTCGGTTGCCAAATGTGCAGTAAAAGATTTTTCCGTCAGAAGGGTCTGAACGCACACTTGGAAAAGCACCGGGAAGAGAATCCGACAGTTTCTTGTACCTTTGAAAATTGCAATGCAGCCTTTtctaaacaatgtaaattagactttcacattttaaaatatcatacaaaccACATCCCGTTTGCGTGTGCGTATTGCCCTAAAGGGTTTTATCGAccggcagatttaaaaaaacacattaaatcaaGTCATGATACAAAAACAGATATTTCAGATACTAATGGTTTAAGTGATCAAAATCCGGTACTTGGGGAGGTGTTAACTGTCTGTGAAAGttaa
Protein Sequence
MVDYIRSTCRVCLMEGNQKVSMFESQDKAKYSDLMKEYTGLEVVQNDNLPTSICDLCSSELMVVIKFVSKFRTSSEKLKDALHLNVPFTKILANLVKDEDEDNLPLSIVSNAIKEEVGFSDADDTSDIFFQNNQSDDEKPLEKKSTLSYRIAKSNEYGLKKDMVQCLACGLLVQNKSAFAVHNRKHTGEKPCKCVQCGKCFTQMGSLNDHIKRHHLRDGFDKNGALAESVKKMRMKDKFGEYRFTCDACGKRFWKKGALTIHLRVHTREKPYQCLYCPKRFAQYSEHQQHTRIHTGEKPYSCHICGKSFVAHTPLRRHLTVHSDERKYKCNMCDTSVKSSDSLKKHMLVMHTTEKHNICELCGTAFAMKYNLKAHMRARHSERSGICDICKKSFSNLYKHMRTHCSEKPFGCQMCSKRFFRQKGLNAHLEKHREENPTVSCTFENCNAAFSKQCKLDFHILKYHTNHIPFACAYCPKGFYRPADLKKHIKSSHDTKTDISDTNGLSDQNPVLGEVLTVCES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-