Basic Information

Insect: Eubasilissa splendida
Gene Symbol: -
Assembly: GCA_031772225.1
Location: CM062872.1:8308935-8312464[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.002 0.16 13.5 3.6 1 23 138 160 138 160 0.96

2 11 0.00025 0.02 16.3 2.8 1 23 166 188 166 188 0.95

3 11 9.3e-05 0.0077 17.6 4.3 2 23 209 230 208 230 0.97

4 11 0.00041 0.034 15.6 4.8 1 23 236 258 236 258 0.98

5 11 0.00031 0.025 16.0 2.9 1 23 264 286 264 286 0.97

6 11 8.8e-07 7.3e-05 24.0 1.6 1 23 292 314 292 314 0.99

7 11 1.8e-07 1.5e-05 26.2 0.9 2 23 321 342 320 342 0.96

8 11 0.0013 0.11 14.0 1.6 2 23 348 369 347 369 0.96

9 11 0.0054 0.45 12.1 0.6 2 23 375 396 374 396 0.95

10 11 6e-05 0.005 18.2 2.6 1 23 402 424 402 424 0.98

11 11 0.0012 0.1 14.1 2.5 1 21 430 450 430 451 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.002	0.16	13.5	3.6	1	23	138	160	138	160	0.96
2	11	0.00025	0.02	16.3	2.8	1	23	166	188	166	188	0.95
3	11	9.3e-05	0.0077	17.6	4.3	2	23	209	230	208	230	0.97
4	11	0.00041	0.034	15.6	4.8	1	23	236	258	236	258	0.98
5	11	0.00031	0.025	16.0	2.9	1	23	264	286	264	286	0.97
6	11	8.8e-07	7.3e-05	24.0	1.6	1	23	292	314	292	314	0.99
7	11	1.8e-07	1.5e-05	26.2	0.9	2	23	321	342	320	342	0.96
8	11	0.0013	0.11	14.0	1.6	2	23	348	369	347	369	0.96
9	11	0.0054	0.45	12.1	0.6	2	23	375	396	374	396	0.95
10	11	6e-05	0.005	18.2	2.6	1	23	402	424	402	424	0.98
11	11	0.0012	0.1	14.1	2.5	1	21	430	450	430	451	0.95

Sequence Information

Coding Sequence: ATGCGCAGTCGAAAAAACAGACAGTCAACACCAAGAATCCGACTGAGCGCAACAGGAAACCGGAGGATAGATAGCCACGGCTCACTGCAGTCTACCCAGGAGCAGCCGCCCTGTCCGCAGTCCAGCAAAAAAGCGCATTACGACTTCCAAGTGTCGCCGGATTTGAACATGGACGTGGATCTTCCTGATGTTTCAATTGTCAAATCTGAGCTGGAGATTTCTGCTGAAGCCGCCTACGCAGAGAGCGAAGATGAGGAATTCTATACTAACATAGAAGTGTTGTATCCTGAAGTAAAAATAGAGGGGCTGGCGGAGTCCAAGCCTGGAGTCTCACACAAGGaagCAGAAGGAGCTGGACGTCCCGACTGCAGTACAACGTACACAAGTATATCCAGTATTGAAGATAAACGATTTTCTTGTACCGAATGCGAATATACGTGTACTCAAAAATCAATGTTTCTACGCCACGCCCTGCAGCACACCGGGGAGAAGCCGTTCCCCTGTTCTGCATGCAGTTTTACATGTTCGCAGAAATCCAATTTGAAAAGACACATGGTTCTTCACACCGAAGACAAACCGTATCCATGTTCACAAAATAAACTCAATTCTATGGAGAAATCTATCACGTGTTCCGAATGCGATGTGAAATGTTCTCATAACTCTACACTAAAAAATCACATGCTAACTCACTCCAAACAAAAACCGTTCACATGTTACAAATGCACTTTTGCTTGCTCGCGGAAAGAATCGTTACAGAGACACTTGCTCACGCATTCTGAAATGAAACCCTTCTCGTGTTCTGAATGCAGTTACACGTGTTCTCAGAAATACGCTTTGCAAAGTCACACGCTTATTCACACGAAAGAAAAACCTTACAGGTGCGTAAAATGCTCCACCGCGTTTTCGCGAAGAGAATCTTTACAACGGCATATGCTGACGCATTCCGAAAGAAAGTCGCTACCGTGTCCCGAGTGCAATCGCACGTATTCCCACAAATCGGCGTTAAAAAGACACATGCTGATCCATTCTGGCGAGAAGCTTTCCTGTCCCCAATGCAGTTATGTGTGTTATTCTTCAACGTATCTAAAAACGCACGCGCGCGTCCACACCGGCAAACCGCTCTCTTGTTCTCAATGCAGTTATACGTCGTACGATAaacagtggttaaaaaaacacatcCTCGCTCACATTGGGCTGAAGCCATTTTCTTGTACCAATTGTAGTTTGAAGTTTTCTTTGAAACAAAACTTGAAAAGTCACATGCTCACGCACAGCGGTCAGAAACCGTTTTCTTGTTCCGAATGCAGTTATATGAGTTGTCGAAAAGCAACCCTGAAGAGGCATATGTTGAGGATGGGAAGGTGGAAGGCCGTAGAAGAAGAGGCCGATCTCAGACTCAATAGACCAACCAGATGCCAGATCTCCGAACTGCGGGAACAAAGAAAGATGCAGGAACATTTGCGGGTCAAAACACGAGCGTCACGATCTTCAGTAATGAGTAAACCGACAGAAGAAGTCATTTTTCTATACCAGGTCTACTTCTGTCCAGTCATGGAGTCCTTCCGATGGATCCAGGGGGTGGGTGTTCTGTCCTCCAAGATCTCTactaccactatttattaa
Protein Sequence: MRSRKNRQSTPRIRLSATGNRRIDSHGSLQSTQEQPPCPQSSKKAHYDFQVSPDLNMDVDLPDVSIVKSELEISAEAAYAESEDEEFYTNIEVLYPEVKIEGLAESKPGVSHKEAEGAGRPDCSTTYTSISSIEDKRFSCTECEYTCTQKSMFLRHALQHTGEKPFPCSACSFTCSQKSNLKRHMVLHTEDKPYPCSQNKLNSMEKSITCSECDVKCSHNSTLKNHMLTHSKQKPFTCYKCTFACSRKESLQRHLLTHSEMKPFSCSECSYTCSQKYALQSHTLIHTKEKPYRCVKCSTAFSRRESLQRHMLTHSERKSLPCPECNRTYSHKSALKRHMLIHSGEKLSCPQCSYVCYSSTYLKTHARVHTGKPLSCSQCSYTSYDKQWLKKHILAHIGLKPFSCTNCSLKFSLKQNLKSHMLTHSGQKPFSCSECSYMSCRKATLKRHMLRMGRWKAVEEEADLRLNRPTRCQISELREQRKMQEHLRVKTRASRSSVMSKPTEEVIFLYQVYFCPVMESFRWIQGVGVLSSKISTTTIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -