Basic Information

Insect: Eubasilissa splendida
Gene Symbol: Sall1
Assembly: GCA_031772225.1
Location: CM062859.1:30232692-30235892[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00096 0.079 14.5 3.6 2 23 134 155 134 155 0.97

2 14 2.9e-05 0.0024 19.2 0.5 1 23 161 183 161 183 0.93

3 14 4.1e-06 0.00034 21.9 2.8 1 23 188 211 188 211 0.97

4 14 0.24 19 6.9 2.3 1 23 228 250 228 250 0.92

5 14 4e-07 3.3e-05 25.1 0.4 1 23 255 277 255 277 0.99

6 14 0.025 2 10.0 3.6 1 23 283 306 283 307 0.96

7 14 0.035 2.8 9.6 0.2 1 19 312 330 312 332 0.95

8 14 6.2e-05 0.0051 18.2 1.7 2 23 441 462 440 462 0.97

9 14 0.019 1.6 10.4 0.4 1 23 481 504 481 504 0.95

10 14 6.9e-05 0.0057 18.1 2.4 1 23 510 532 510 532 0.99

11 14 0.00019 0.016 16.7 1.6 2 23 538 559 537 559 0.96

12 14 0.00012 0.01 17.3 2.8 2 23 566 588 565 588 0.96

13 14 0.36 29 6.4 0.8 1 20 596 615 596 615 0.88

14 14 0.00053 0.043 15.3 0.2 3 23 628 649 627 649 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00096	0.079	14.5	3.6	2	23	134	155	134	155	0.97
2	14	2.9e-05	0.0024	19.2	0.5	1	23	161	183	161	183	0.93
3	14	4.1e-06	0.00034	21.9	2.8	1	23	188	211	188	211	0.97
4	14	0.24	19	6.9	2.3	1	23	228	250	228	250	0.92
5	14	4e-07	3.3e-05	25.1	0.4	1	23	255	277	255	277	0.99
6	14	0.025	2	10.0	3.6	1	23	283	306	283	307	0.96
7	14	0.035	2.8	9.6	0.2	1	19	312	330	312	332	0.95
8	14	6.2e-05	0.0051	18.2	1.7	2	23	441	462	440	462	0.97
9	14	0.019	1.6	10.4	0.4	1	23	481	504	481	504	0.95
10	14	6.9e-05	0.0057	18.1	2.4	1	23	510	532	510	532	0.99
11	14	0.00019	0.016	16.7	1.6	2	23	538	559	537	559	0.96
12	14	0.00012	0.01	17.3	2.8	2	23	566	588	565	588	0.96
13	14	0.36	29	6.4	0.8	1	20	596	615	596	615	0.88
14	14	0.00053	0.043	15.3	0.2	3	23	628	649	627	649	0.95

Sequence Information

Coding Sequence: ATGAACGAGAATACTGATATTTGTCCTGACGTGAGAAATAATGAAGatataaatagtatttgcagAGAATTGGATTATGTTGCTATGCTATCTCAAGTGCCTGAAAATTCCTCCTTCTCCAACTTGCACACTGACTTCGACCAGGAGGTTTTTAACATAGCAGAAAACAGCTACGACGATACAGAAAACACCGAAGATATGAACAAGAACGAATTGATAATACATTCAGTAATAAACGGAGAGCTGTATCGAAGCCGAGGTAAATCATTTGATTATGTTTACGAAGGGAAGGAGATAGACCTGACCGGAGAAGTGCTTGAGGAACCATACTCCATACTGGACTTGGATGGTGATCAGGAATTTGACTTCAAGCGGGAGTCAGGAAAGAAAGTTGAAGCGCGGTGCGAGCTGTGCGGGAGGAAGTGTCGCTCACTGAACGCTCTCAATCATCACATGCTCGTGCACAGTGAGGACCGTCCGTACGTGTGCCAGATCTGCCAGAAggCGTTCAAGGAGCAGCCGACCCTTCGACGCCACATGTGGACGCACATGGCCAAGCAGCACCAGTGCGATATTTGCAAGAAATACTTTGTGGAGAAGAGTTCCCTGCGGCGCCACATGAGCACCATTCATGCGGACTTCCGACCGGGTGCTCGCGCACTTCAAGGATCCCGCCTGCAGTATGCCTGTCCGCGCTGCGCCAAGGTCTTCAAGTCTGTCACCAAGTACAACATGCACTGCCAGATGCACGGCAACCCCAACTACGAGTGTGAGGTGTGTGGCAAAGTTTACGCTGGCCGTAGCCACTTGAAGATTCATCAACGGATCCACACCGGGGAAAAGCCTTTTGTTTGCAACATGTGTGACTCCAAATTCGCTTTCAAGCACGTGCTGAAATCGCACCAAGCTCGCATCCATCACCGCATCAACAAGTATAAGTGCAATATTTGTTCCCTGGCCTTCCTTAAGAAGTCCGATCTCTCCAATCATGCCAGTTGCCACATGATCAACATTAGAAAGGGAAAGAGACATTACAATTCTCAGAAACATTCCCGCCGCTGCAGTAATGTAGAAATGAAAAAACTCTTGCAGAAGAATATGTTGAAGTATAATATATCTTCTAAGAATCCGGATTACGCTTTGTTCGGTCAGCTAATCGGTATCCTACCCGAGTCCGAGCACCAGAGGGGTGATGAGGAGGTGGAGGTCGGAATCGGAGAGGGAGATGAAGATGTTCTGTTGGAGACGCTCGACACGAAGATAAAATCAGAACCCAGCAAGTATTATTCTTCATTGGTTGATccagaaaaaaaagaaaagaaatgtCAGAAATGCAAGAAAGAGTTTGAAAGAATGGGTGACCTAAAACGCCACATCATATCACATATTGTCCAAGACATAACGTCAAAAGCCAAGGAGTCCAGCCATTCCATTCCGCACTACGAGTGCAGCATCTGCGGCCTGTCCAACTTCAAGCAGGTGGACAAGTTCAAGGCGCACCTCCGGGAGCACGCCAAGTTGACGCTGTACAAGTGCAAGTTCTGCGAGCGGGCCTTCGGGGATTCCAGCAACTACTCCAAGCACAAGAAGGTCCACGGCAACAAGTACTTGCAGTGCGATATGTGTCGGAGAAAGTTCAACACCAAGCGGATGCTCATCTCGCACATGGAGTATCACAAGGGCCACCCCCCCACCCGGTGCATGTACTGCAACAAGGAATTCTACTTCCAGTCTAGTTTCAGGAAGCACATCAAGATCTCGCATCAAGGCAAAGCCAACGTGACATACAAGTGTGAGTTCTGCGGCGGACGATTCAAGTCTGTGAAGCAAAAATGGGAACACCAGTGGGAGCAGCACGGAGTACGTAAGGTGCGTGCTGACTGCACCGTTTGCGGCGAGCGTTTTCGCAAGGTGTCTCTGCTGCGTGCCCACGCCCTACGCGAGCACGGTGCCTGCAGTCTCACCATTAAGGAGGAGGCCTGCGGACTGCTCACGCAGAGTGATACTTCCGAACTCCTCATTTGCGTTGGGGAAGGTCAGTGA
Protein Sequence: MNENTDICPDVRNNEDINSICRELDYVAMLSQVPENSSFSNLHTDFDQEVFNIAENSYDDTENTEDMNKNELIIHSVINGELYRSRGKSFDYVYEGKEIDLTGEVLEEPYSILDLDGDQEFDFKRESGKKVEARCELCGRKCRSLNALNHHMLVHSEDRPYVCQICQKAFKEQPTLRRHMWTHMAKQHQCDICKKYFVEKSSLRRHMSTIHADFRPGARALQGSRLQYACPRCAKVFKSVTKYNMHCQMHGNPNYECEVCGKVYAGRSHLKIHQRIHTGEKPFVCNMCDSKFAFKHVLKSHQARIHHRINKYKCNICSLAFLKKSDLSNHASCHMINIRKGKRHYNSQKHSRRCSNVEMKKLLQKNMLKYNISSKNPDYALFGQLIGILPESEHQRGDEEVEVGIGEGDEDVLLETLDTKIKSEPSKYYSSLVDPEKKEKKCQKCKKEFERMGDLKRHIISHIVQDITSKAKESSHSIPHYECSICGLSNFKQVDKFKAHLREHAKLTLYKCKFCERAFGDSSNYSKHKKVHGNKYLQCDMCRRKFNTKRMLISHMEYHKGHPPTRCMYCNKEFYFQSSFRKHIKISHQGKANVTYKCEFCGGRFKSVKQKWEHQWEQHGVRKVRADCTVCGERFRKVSLLRAHALREHGACSLTIKEEACGLLTQSDTSELLICVGEGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -