Basic Information

Insect: Eubasilissa splendida
Gene Symbol: -
Assembly: GCA_031772225.1
Location: CM062873.1:36695571-36708634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0011 0.087 14.3 0.8 1 23 237 259 237 259 0.98

2 11 0.00074 0.061 14.8 3.8 1 23 326 348 326 348 0.98

3 11 0.00046 0.038 15.4 5.1 1 23 356 378 356 378 0.98

4 11 3.5e-06 0.00029 22.1 0.3 1 23 384 406 384 406 0.97

5 11 3.7e-05 0.0031 18.9 2.8 1 23 412 434 412 434 0.98

6 11 1e-06 8.3e-05 23.8 0.7 1 23 440 462 440 462 0.96

7 11 2.2e-06 0.00018 22.8 1.1 1 23 468 490 468 490 0.99

8 11 8.6e-06 0.00071 20.9 0.2 1 23 496 518 496 518 0.98

9 11 5.9e-05 0.0049 18.3 1.1 1 23 524 546 524 546 0.99

10 11 7e-07 5.8e-05 24.3 0.8 1 23 552 574 552 574 0.99

11 11 5e-05 0.0041 18.5 1.2 1 23 580 602 580 602 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0011	0.087	14.3	0.8	1	23	237	259	237	259	0.98
2	11	0.00074	0.061	14.8	3.8	1	23	326	348	326	348	0.98
3	11	0.00046	0.038	15.4	5.1	1	23	356	378	356	378	0.98
4	11	3.5e-06	0.00029	22.1	0.3	1	23	384	406	384	406	0.97
5	11	3.7e-05	0.0031	18.9	2.8	1	23	412	434	412	434	0.98
6	11	1e-06	8.3e-05	23.8	0.7	1	23	440	462	440	462	0.96
7	11	2.2e-06	0.00018	22.8	1.1	1	23	468	490	468	490	0.99
8	11	8.6e-06	0.00071	20.9	0.2	1	23	496	518	496	518	0.98
9	11	5.9e-05	0.0049	18.3	1.1	1	23	524	546	524	546	0.99
10	11	7e-07	5.8e-05	24.3	0.8	1	23	552	574	552	574	0.99
11	11	5e-05	0.0041	18.5	1.2	1	23	580	602	580	602	0.98

Sequence Information

Coding Sequence: ATGGACACCAGAGAAGATAGCGTCTCAGCAAACATGGCCTCGCATGCCCTGTGCCGGGCGTGCATGTGCAACGCCAGTAATTTACAATCCGTCTTCATAGAATCAAAGGTTATGGAGCGGAAGATATCCGAAATGATCACGTATGTCACAGGCATCCAGatagaGGAAAGTGATGGACTTCCAAAACAGATTTGCTATCAATGCGTTTCGCTCACTGAATCAGCTTCCTTTTTCAAGGAGCAATGCTATCAGTCTGATACGACATTCAGAAGGATCATTAAGAATACACAAGATGAAAGGAATTTAATCAAGAGAGAAAAAGACTGCTCGATAGAATTGGAGGTCAAGGAAACTTCAGAGCCTGTCCAAAATAGTACAAAAGAAGAAGGCTCGAAAGATGATGTAGAAAGTCTTGACAGTGCagttgaaaaaatttcatcagaaaaaTCTCCCAGTGATGCACTCTACCAATGTGCAGTGTGCAGTTTAAGTGATAGTGACACACCACTAGCGGAGAACTTGAGATATGAAGATCATAATTCTGATATTGAATACAATCCAACAGACATCATTACTGAAGATCATTACAATGATGACATTACAATTGAGAAAACGGATATCAAATTAGAGCTAGAAGCTACTCCGATGGAATGCGAAGAAATCAAATCGGAAACAGTAATGGACAAGAATGTAAagaaaaacaaagtatattcCTGTGTCGAGTGCGATATGACATTCAATTGGAAAATGTTCAGTCTACATATGAAGACCGAGCACTCCAATGATATTTCTGAAAAACCTGCAAAAGTAAAAAGGGAATATAAGAAATTGCACAAAACTAACGGTGTGATTGAAAAAAAGAAGACGAAGAAAAAGAAACAAGACGCAGCTGAGTCGGTTGATCCCTGCGACATTATTTGGAATGGCGACGATATCAGCGGCGATGATGGCAAAGACGCCAATACTCCAGTGCCTTATTCTTGTACAATGTGCGAGAGGAAATTTTCCAAATTTACAACTTTAACATTACACTTGAAGAAGCACGAGGATCAGTTGAGTGAAGTTCACACATGCCTTACTTGTAAAAGagaATTCAAAAGAAAGGCACATTTGGATAATCATATTTTGACTCATTCTGTAGAGAAAGGCTTCAAATGTACTCTGTGTGATAAGGCTTTTGCGAGACAAGACAGCCTTTCGATGCACATAGCCAATCATGAAGGGATCAAGAAACATCAATGCAATTTCTGCGAGAAAGGATTCAACATGCTGTCAACATTGAAGGATCACATCAGAACTCACACAGGAGAGAAGCCCTTCTTATGCTCCATATGCGGACGGGGTTTCAGCCAGAGTACCAACCTCAAGGAGCATGTGCGTCGCCACCAAGGATACAAACCATTCAAATGTTCATTTTGTGACCAAACATTTGTATCGAAAGGTGAACTGGAAGCGCACACCCGTAAGCACAGCGGTGCGCACCCTTTCGTGTGTGACGTTTGCGGGGGCGGTTTCACCACGTCCAGCTCGCTGGTGAAGCACAAGCGCATCCATACGGGAGAACGCCCATATCAGTGTGACTTCTGTCCCATGCGCTTCACTGCCCTTGGCACGCTCAAGAACCACCGACGCACACATACGGGCGAGAAACCTTACAAatgcgTGTATTGCGACAAGGCGTTCGCTCAGAAGAATGACCTTGTGTCCCACACACGTACGCACACGGGTGAGCGACCCTATGTGTGTTCCGCATGTGGACACGCCTTCAGGCAAAGTTCGGCTCTCAAGACTCACTTCAAGATACACGGTGGCCTGGGTGATCAGGATATCGGCTGCATTAAGGTGCCCGACCCCATGCTGGCTATCACCGGATTGGTGGTGACCAAGAGTTCTGATGACAATACTTCAGTTAGTCTAATGACTCCAAAAAGTGAAACCAGCCAACAATAG
Protein Sequence: MDTREDSVSANMASHALCRACMCNASNLQSVFIESKVMERKISEMITYVTGIQIEESDGLPKQICYQCVSLTESASFFKEQCYQSDTTFRRIIKNTQDERNLIKREKDCSIELEVKETSEPVQNSTKEEGSKDDVESLDSAVEKISSEKSPSDALYQCAVCSLSDSDTPLAENLRYEDHNSDIEYNPTDIITEDHYNDDITIEKTDIKLELEATPMECEEIKSETVMDKNVKKNKVYSCVECDMTFNWKMFSLHMKTEHSNDISEKPAKVKREYKKLHKTNGVIEKKKTKKKKQDAAESVDPCDIIWNGDDISGDDGKDANTPVPYSCTMCERKFSKFTTLTLHLKKHEDQLSEVHTCLTCKREFKRKAHLDNHILTHSVEKGFKCTLCDKAFARQDSLSMHIANHEGIKKHQCNFCEKGFNMLSTLKDHIRTHTGEKPFLCSICGRGFSQSTNLKEHVRRHQGYKPFKCSFCDQTFVSKGELEAHTRKHSGAHPFVCDVCGGGFTTSSSLVKHKRIHTGERPYQCDFCPMRFTALGTLKNHRRTHTGEKPYKCVYCDKAFAQKNDLVSHTRTHTGERPYVCSACGHAFRQSSALKTHFKIHGGLGDQDIGCIKVPDPMLAITGLVVTKSSDDNTSVSLMTPKSETSQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -