Basic Information

Insect: Eubasilissa splendida
Gene Symbol: -
Assembly: GCA_031772225.1
Location: CM062871.1:335336-345824[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00011 0.009 17.4 0.5 1 23 284 306 284 306 0.98

2 10 5.7e-05 0.0047 18.3 0.6 1 23 312 334 312 334 0.98

3 10 2.4e-07 1.9e-05 25.8 2.1 1 23 340 362 340 362 0.99

4 10 4.2e-07 3.5e-05 25.0 1.2 1 23 368 390 368 390 0.98

5 10 3.7e-06 0.0003 22.1 0.6 1 23 396 418 396 418 0.98

6 10 1.6e-06 0.00014 23.2 0.9 1 23 424 446 424 446 0.97

7 10 1.1e-05 0.00089 20.6 0.3 1 23 452 474 452 474 0.97

8 10 2.6e-06 0.00021 22.5 3.1 1 23 480 502 480 502 0.98

9 10 9e-06 0.00074 20.8 1.4 1 23 508 530 508 530 0.98

10 10 8e-05 0.0066 17.8 2.1 1 23 536 558 536 558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00011	0.009	17.4	0.5	1	23	284	306	284	306	0.98
2	10	5.7e-05	0.0047	18.3	0.6	1	23	312	334	312	334	0.98
3	10	2.4e-07	1.9e-05	25.8	2.1	1	23	340	362	340	362	0.99
4	10	4.2e-07	3.5e-05	25.0	1.2	1	23	368	390	368	390	0.98
5	10	3.7e-06	0.0003	22.1	0.6	1	23	396	418	396	418	0.98
6	10	1.6e-06	0.00014	23.2	0.9	1	23	424	446	424	446	0.97
7	10	1.1e-05	0.00089	20.6	0.3	1	23	452	474	452	474	0.97
8	10	2.6e-06	0.00021	22.5	3.1	1	23	480	502	480	502	0.98
9	10	9e-06	0.00074	20.8	1.4	1	23	508	530	508	530	0.98
10	10	8e-05	0.0066	17.8	2.1	1	23	536	558	536	558	0.98

Sequence Information

Coding Sequence: ATGCGCCACGAGCGGCGCGCGCATCGCATCATTAGTGGACGGACGCCAATTGGACGCATCGCATCGGTGACAGGTGGCTTGTTGCTAATGCACACTGTGGTGGCCGCCGCTATGGAAGTTAAGAGAGAGCCAAATTCTCCGGAAGAAGGGGCATACGCCTCTGCTCACATCAAAACCGAACCTCCCGATCCTGAAGAAGGGTCGAGCGGCAGACACGTGCGTCTCGACTATGCCGTAGATATGGTCTGGCTCCCGGATACGGCGGTGAAGCGAGAGCCGGAGTTTTCGGATAATGGAGTTTACCCCTGCGCTACACCAGATATCTGTTCGAATGCGGACTACGCTTCTGATATCAAGGCTGAAGCTCCCGATCGCCGCGACAGTCCGACCGGCGCACTGATGCCGCTCGTCTGGGTTCCCGATGTGGAAGTGAAACGAGAACCGGATTCTTCGTGTGAAGGTGTTTACGGCTCTGCTACACCAGTTGTCGGTACGACCGAGGACGCTCCTCAAATGAAAGCGGAAGCTCCCGACTCCTGCTCGCCCCCCGACTATGCCGTGGACATCTGGATCCCCGACGTCAAGGTGGAGTGCGCTGGGAGGTCGCAAGCAGCTTCGTTTACTGGCTCTCACCTGTCTTGTGATGAACCTCTCGAGAGAGGCGACGTCGGCCGCTCTGTAAAGACAGAAATGTTGGAACATGCAAGAAGTCCAGCTGTTCAAACCCAATTACCTGCTGGTCAGAACAGTGCCAAATGGCCGCACCACGGCAAGGGGATCCTTTCTGACAAAGCGTGCAGCCAGAAAAATAATCTATCGACTTACATGACACCTCACAAAGAAAAATCGTTTTCTTGCAAAGAGTGTGCGGAAACCTTCAGTCAGAAAGGTCTAATGTTAATACACTTGAAAACACATACCGGCGAAAAGCCTTTTATATGTGAATACTGTCAGAAGGAATTCAGCTGGAAGAGTAATTTGTTGATTCATGTGAAAACTCACACCGGAGAAAAGGCATTCACCTGCGAGTACTGTAATAAAGCATTCAGTCAGAGGAACAATTTGTTAAATCATTTGAAAACGCACACCGGAGAAAAACCTTTTGTTTGTGAATACTGTCAGAAGTCGTTCAGTCGGAGCGGCACCCTGTCCATTCATTTGAAAACGCACACGGGCGACAAGCCGTTCGTTTGTGAATACTGTCAAAAGGCATTCAGTCGGAGGGGCGACTTGCTGATTCATTCGAAGACGCACACGGGCGAGAAACCCTTCGCCTGCGACAAATGCAACAAAGCATTCAGTCAGAGGAGTAACTTGGTGATCCACTCGAAAACACACACGGGCGAGAAGCCCTTCGCCTGTGAAATATGTAGCAAATCGTTCGGTCGAAGGGGCACTCTGTTGATTCACTTGAAAACGCACACGGGCGACAAACCGTTCGTTTGTCAAGAATGTATGAAATCGTTTAGTCAAAACAGTCATTTGTTGATGCACATGAGAACCCACACTGGGGAGAAACCCTTTCATTGCGAGATCTGCAAGAAGCCGTTCGGGCGGAAGGGTGACTTGATGGACCATTTGAAGACACACACGGGAGAGAAGCCGTTTTCCTGCGAGGTCTGCATGAAGGCGTTCAGTCGCAGGGGGCACTTAATGATTCACACGAAGACACACACGGATGTCCGGGATCCCGACGTCAAGAAGTGCGCTGGAAGTTTACAAGCAGCTTCGGGTTCTGGCTCTCACCTGACCTATGACAAGCGTGGCATCATCCACAGTACTGTAAAAACTGGCGGAGAGAAACTTTCAAATGGGGATATTTTGGAACATGCAAGAAGTCCGAAGAAGTGGCTGCAAGTCCAAATAATAACACACAAGACCACGAAATCGGGACGAACTCGCGCTGAGGAGGTACGGTACGGAGGCTGGGGACATTTCCCGACGTATGCTGCGAAGACTCTGAGATGTGAGCGCTACAACGTGCACCTATGCTTCACTCCCGTCCGCAACCGCTTTTAA
Protein Sequence: MRHERRAHRIISGRTPIGRIASVTGGLLLMHTVVAAAMEVKREPNSPEEGAYASAHIKTEPPDPEEGSSGRHVRLDYAVDMVWLPDTAVKREPEFSDNGVYPCATPDICSNADYASDIKAEAPDRRDSPTGALMPLVWVPDVEVKREPDSSCEGVYGSATPVVGTTEDAPQMKAEAPDSCSPPDYAVDIWIPDVKVECAGRSQAASFTGSHLSCDEPLERGDVGRSVKTEMLEHARSPAVQTQLPAGQNSAKWPHHGKGILSDKACSQKNNLSTYMTPHKEKSFSCKECAETFSQKGLMLIHLKTHTGEKPFICEYCQKEFSWKSNLLIHVKTHTGEKAFTCEYCNKAFSQRNNLLNHLKTHTGEKPFVCEYCQKSFSRSGTLSIHLKTHTGDKPFVCEYCQKAFSRRGDLLIHSKTHTGEKPFACDKCNKAFSQRSNLVIHSKTHTGEKPFACEICSKSFGRRGTLLIHLKTHTGDKPFVCQECMKSFSQNSHLLMHMRTHTGEKPFHCEICKKPFGRKGDLMDHLKTHTGEKPFSCEVCMKAFSRRGHLMIHTKTHTDVRDPDVKKCAGSLQAASGSGSHLTYDKRGIIHSTVKTGGEKLSNGDILEHARSPKKWLQVQIITHKTTKSGRTRAEEVRYGGWGHFPTYAAKTLRCERYNVHLCFTPVRNRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -