Espl033888.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062872.1:8053561-8071940[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.00029 0.024 16.1 0.5 1 23 243 265 243 265 0.97 2 22 4.9e-05 0.004 18.5 4.1 1 23 271 293 271 293 0.98 3 22 9e-05 0.0074 17.7 4.3 1 23 299 321 299 321 0.96 4 22 0.044 3.7 9.2 1.0 1 23 327 349 327 349 0.96 5 22 0.0064 0.53 11.9 2.3 3 23 357 377 355 377 0.95 6 22 0.1 8.2 8.1 0.7 1 23 411 433 411 433 0.98 7 22 0.011 0.87 11.2 0.3 1 23 449 471 449 471 0.97 8 22 0.007 0.58 11.7 3.6 2 23 478 499 477 499 0.97 9 22 1.5 1.2e+02 4.4 3.2 1 23 505 527 505 527 0.93 10 22 0.06 5 8.8 1.3 1 23 533 555 533 555 0.93 11 22 0.00011 0.0089 17.4 1.5 1 23 561 583 561 583 0.97 12 22 0.0022 0.18 13.3 3.2 1 23 589 611 589 611 0.96 13 22 0.012 0.97 11.0 3.3 1 23 617 639 617 639 0.98 14 22 4.6e-05 0.0038 18.6 1.7 1 23 645 667 645 667 0.99 15 22 0.0018 0.15 13.6 1.4 1 23 673 695 673 695 0.96 16 22 3.1e-05 0.0026 19.1 1.1 1 23 701 723 701 723 0.98 17 22 0.00066 0.055 15.0 2.7 1 23 729 751 729 751 0.95 18 22 0.0022 0.18 13.3 1.7 2 23 758 779 757 779 0.97 19 22 0.0029 0.24 13.0 2.0 1 23 785 807 785 807 0.97 20 22 0.01 0.83 11.2 3.4 3 20 815 832 813 835 0.93 21 22 1e-05 0.00086 20.6 2.1 1 23 841 863 841 863 0.99 22 22 0.00025 0.021 16.3 4.9 1 23 869 891 869 891 0.98
Sequence Information
- Coding Sequence
- ATGGCCACGTGTGGCTCGCCCCTGGTCCAGTTCACGGACGCGGGCTCCGCTGTTTCGCTCGCCATGTGGTCTCCGTGGCCACCTCCGGTCCTACGTTGTGAGCAGCGGGAATATTCGCCACGTCCTCGGATGCGTTCCAGgaggcacatcgcagcttcctggcggATTCGTCTCGAGGCAAAATGGCGGTCGGTGTGGAGCTACCCCGCAGCGCCCCGGAGCAGGTCCGGTGCGTTCGACAGGCGCAAAGCGAGAGAGAGTAGCTTCGGCTTGGCTAAAACTCACCCCGGCCAAATGCGCGAGGGAGGGGGCAGCGACCCATCGTCCGCTGTGGACGCATGTATGGAAGGGGACGCCTCTACCTTCGAGCCGGAAAGGGAGAACCGAGCTGAACTCTGCCAGGACGAAACTTCCTCCGAGGATGTAGACATATTATTTGTGgatgttaaaaatgaaacgtCAGACGATGCTCAAAATGTCGAATGCACTGAATCACCAGGACTCAAGCCTTCCAGTCCGGCCACCAGCTGCTGGTGTTGTGACAGAGACATGGATTTCTCAAAGTCAGACATGTCTGCCGTCAAGCAGGAGCGGGAAGGTAGTCGGAGCGAGGACGATGATGGCGGCGATGACGCTCTCGGGTCTGATGTTGAGGTGGTTTACCTCGACGTGAAGAAAGAATGCCTGGAGTCTTCTGGCAAATGCGGCCAGAAAGTCGCTAAACAGTTCGCGTGCGAGATATGCGGTTTCGTTTGCGCTGccaaatacaatttgaaaactCACGTTCTGACGCACACCGGCGAGAAACCGTTTTCCTGTGACGTGTGCAATTACGTGTGCACCACAAAATCCTCGCTGAAGAGGCATTCCAATACACACGTTGATGGAAAACCGTTCGCGTGTCACAGGTGCAGCAAAGCGTTTTCCGACAAGAGTTATTTCAGAAAGCATTTGCTGAATCACGCACTGGAGAAGGGATTCTCGTGTGACAAGTGCAGTTACATGTCTgtggataaaaacaaattaaagttaCACACACTCGCGCATACCGGAGAGAAGCCGCTCTTTTGTAACGAGTGCAGTTTCACGTGCGCGAAGAAATCCGCTTTGAAAAAACATGTGGCTTCTCACACAACAGTAAAACCGCCATTACACAATGAAACAGAGTGTAATGcttttgtagaaaatatttttaaaaaacttgatGCACCTCTTTCTCGAAAGAAACTGTTCACTTGTAATAAATGTAGTTACTTAAGTATCGGCGAAGATAAATTGAGTAAACACATGCTGTCTCACTCAGATGGAAACGATTTTGAAAATTGTCCTACGAAAGAATCACATTTTTCGTGCGATGTGTGCGTCGACATGTTTTCTGACGAGGCCAGCCTCAAGAAGCATTCTAAAATGCATGCACCAGGAGGCTCGCTCTCGTGCAATGAATGCTCGTACACGTGCTTACGACAATACAATTTGAAACAACACCAGCTCACGCACATCGACCGGAAACCGTTTGTGTGTGAAGAATGCTGTAAACAATGTTTAAGCGCGACCGGTTTGAAAAATCACATGCTCACGCACGCTGAAGGAAAACCGTTTGCGTGTACCGCGTGCGATTACGCGTGCATGAAAAAGAGCAGCCTTAAGGCTCACACGGTGAATCATTCGGATAAGAAGCCGTTTCCGTGCGCCGAATgtagtaaaacttttttttcctcAACCGGTCTGAAAAATCACATGTTTAAGCACACTGgggagaaattatttttgtgtacagTGTGCAGCTACATGTGCGTTAAGAGTTACAGTCTCAAAACGCACATGCTGACCCACACCGGAGAGAAGCCGTACTCTTGTAAAGAATGCAGTTACACTTGCGCGGAGAAAGGCAGATTAAAGTTGCACATGTTCAcgcacactggtgagaaaccgtATCGGTGTACTGAATGCGGAGATAGATTCGCTTATAGCAGTAGTTTGAAAAAACACAAGCTCACCCACGCGCAATGTAAACCGTTTCTCTGCAACGAGTGTGCTTATACGTGCGTCGTGAAGAGAAGTCTAATAGAACACATGCGCACGCATACAGGCGAGAAACCGTTCAGTTGTGATGAGTGCAGTAAGAAATTTGTAAGTAAACaaggtttaaaaaatcatttactcaGCCACAGTGGAGAGAAATCGTTCTTGTGTAATGTATGCAGTTATTTATGCTCTAGGAAATCTTCGCTCAAGGCACACATGCTTTCTCACTCGAAACAGAGGCCTCTGTCGTGTAACAAATGCGCGTATTCGAGCGCCCACAGGGGCTCGTTAAAGCAACACATGCTCACACACGCGGGAgtgaaaccgttttcatgttacATATGCAATTATGTATGCGCGACGAACGCAATGTTGAAATCGCATTTGTTCAGCCACACTGGGGAGAGGCCGATTTTCTGCGACCGGTGTGATAAATCGTTCAGAACTAAAAACGTTTTGAAAACACACTTGCTCTGCCACACCGGCGAGAAAGCCTTCACGTGTGAAGTGTGCGGTTACATGTGCGCCAAAAAACAGAATTTACAAAATCACATGCTCACCCACACTGGGGAGAAGCCGTACCCGTGCCACCTGTGCAGTCACACGAGCACAACCTCGTCCAGCTTGAAACGGCATTTGCTGACTCACACCGGCGAGAAACCGTTTGCGTCTACTGAAGGCCTGTCTGCCGTAAAGGTGCGCATCAACGCCGGGGAGGGCTGGACCTCCATGCCGAAAGGCTTCTGGGCCCGCGCTTATTTCCTCCTGCAGAATATCACTCGGCTCTAG
- Protein Sequence
- MATCGSPLVQFTDAGSAVSLAMWSPWPPPVLRCEQREYSPRPRMRSRRHIAASWRIRLEAKWRSVWSYPAAPRSRSGAFDRRKARESSFGLAKTHPGQMREGGGSDPSSAVDACMEGDASTFEPERENRAELCQDETSSEDVDILFVDVKNETSDDAQNVECTESPGLKPSSPATSCWCCDRDMDFSKSDMSAVKQEREGSRSEDDDGGDDALGSDVEVVYLDVKKECLESSGKCGQKVAKQFACEICGFVCAAKYNLKTHVLTHTGEKPFSCDVCNYVCTTKSSLKRHSNTHVDGKPFACHRCSKAFSDKSYFRKHLLNHALEKGFSCDKCSYMSVDKNKLKLHTLAHTGEKPLFCNECSFTCAKKSALKKHVASHTTVKPPLHNETECNAFVENIFKKLDAPLSRKKLFTCNKCSYLSIGEDKLSKHMLSHSDGNDFENCPTKESHFSCDVCVDMFSDEASLKKHSKMHAPGGSLSCNECSYTCLRQYNLKQHQLTHIDRKPFVCEECCKQCLSATGLKNHMLTHAEGKPFACTACDYACMKKSSLKAHTVNHSDKKPFPCAECSKTFFSSTGLKNHMFKHTGEKLFLCTVCSYMCVKSYSLKTHMLTHTGEKPYSCKECSYTCAEKGRLKLHMFTHTGEKPYRCTECGDRFAYSSSLKKHKLTHAQCKPFLCNECAYTCVVKRSLIEHMRTHTGEKPFSCDECSKKFVSKQGLKNHLLSHSGEKSFLCNVCSYLCSRKSSLKAHMLSHSKQRPLSCNKCAYSSAHRGSLKQHMLTHAGVKPFSCYICNYVCATNAMLKSHLFSHTGERPIFCDRCDKSFRTKNVLKTHLLCHTGEKAFTCEVCGYMCAKKQNLQNHMLTHTGEKPYPCHLCSHTSTTSSSLKRHLLTHTGEKPFASTEGLSAVKVRINAGEGWTSMPKGFWARAYFLLQNITRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -