Espl027427.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eubasilissa splendida
Gene Symbol
-
Assembly
GCA_031772225.1
Location
CM062865.1:20345374-20368447[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.031 2.5 9.7 0.8 1 23 154 176 154 176 0.97
2 16 0.00052 0.043 15.3 1.1 2 23 181 203 180 203 0.96
3 16 1.6e-06 0.00013 23.2 5.8 2 23 209 230 209 230 0.97
4 16 2e-06 0.00017 22.9 1.5 1 23 236 258 236 258 0.98
5 16 5.8e-06 0.00048 21.4 0.1 1 23 264 286 264 286 0.99
6 16 0.00017 0.014 16.8 2.4 2 23 293 314 292 314 0.97
7 16 0.2 16 7.2 0.8 1 23 320 344 320 344 0.90
8 16 4.1e-05 0.0034 18.8 3.6 1 23 350 373 350 373 0.95
9 16 0.031 2.5 9.7 0.8 1 23 568 590 568 590 0.97
10 16 0.00052 0.043 15.3 1.1 2 23 595 617 594 617 0.96
11 16 1.1e-06 9.2e-05 23.7 3.0 2 23 623 644 623 644 0.97
12 16 2e-06 0.00017 22.9 1.5 1 23 650 672 650 672 0.98
13 16 5.8e-06 0.00048 21.4 0.1 1 23 678 700 678 700 0.99
14 16 0.00033 0.027 15.9 2.2 2 23 707 728 706 728 0.96
15 16 0.21 17 7.1 1.7 1 23 734 758 734 758 0.90
16 16 5e-05 0.0042 18.5 3.7 1 23 764 787 764 787 0.95

Sequence Information

Coding Sequence
ATGTCATCGATATTTGGACCAGCCAAGGAAGACGGCGTTATTCTTAGTGAGAAAATAAACTATTGTGTCGATATACAAGTGTACGAAAACGACGGACTCCCCGAAAAAATATGCAACCTTTGCGAGGAAGAGCTAAATGTGTCCATGACATTCAAAAAGAAATGTTTagaatctaataatatattatgcacgATTAAGAATTTTAGGTGCAATGTTAAATTAGAAACCGAAGATCTGACACCTAAAGATGAAGATGCGGAGTCCGAGCGGAGTTACCAGGACGAGGATATCAAAGTAGCTCTAATGAATGTCAAAAAAGTTAAGAAAActgtgaaaaaagaaaaaagaagagATTCCTCCGAATTGCCCGACAAGAAAAAAGGTAAAATCAAGAAACCAAAATACACCAGAAAGGTTGACGACTTTACTAAAACGAACTATGATGTAGTGGAGGACGGGTACAAGTGTAAAATGTGTGGCAAACTCATCACAGGCAGAGCTGCGATGAAGAGCCATTTTAAGAGCCACTCGGGGCCCATGTCCTGCTCCGAGTGCAACAAGGACTTCACCAGCAAGCAGTTATGGGCCAAGCATTACAAGAAAGTCCACTGCTCATACACAGAGGTGTGTCACAAGTGCGGGCGCGCCTTCAAGCATCAAGACCATCTTAAGGCGCACATGAAGGTGCACTCCATGGCACGGCCCTTCGAGTGTCAGTACTGTGGCAAGGGCTTTCGCAGCAAGAACAACATGCAGATGCACGTGCGCAGCCATCTCAACCTGCGTGAATACTCATGCGAGATGTGCGGAGTAGCGTATGTTACACCCAGTGCCCTCAGgtACCACATGATGACGCACAGCGGCGTGAAGCCCCTCCAATGCACCTTCTGCGACTATCGCACGGATAAAAGCAGCACCCTCACCCGTCACATCCGCAAGCACACAGGCGAAAAACCCTTCACTTGCTCCTTTGTCGGCTGCGATAAGGCCTTCGCGGCCGGCAACGAGCTCACTCGTCATTGCCTCTCCCACACAGGTGAGAAGCGTCACGCCTGCGAGAAATGCTACAAAAGCTTCAGGCGGGCTGATGCGTACCGCAAACATATGATGAAGAAACACAAGGTGCAAAACTTTCAGATTGTCCGTAAAACAAGGCTTATTCTGGAAGACGTTGTAGAGAGTTTACACACGACAGGACAATTAGCTTCAGAAAATCTTACTGCAGCTGTCAACGCAGGCTCACTCAATGCAAATGTGATCACAAACATGGGAGTCAATAACATCACTCTAAACAATATGGGTATTAATAATATCGGCATCGTGAATATGGGAGGTACAGATGTCGTGGTCGCAGATGGAGATATGGCTATACCTGGAATGTCTAATGCGGCTACCAGCACGAAAGAATTAGAAGAAATcTGCAATGTCAAAGTAGAAACAGAAGAACCGACTCCTAAAGATGAAGACGCGGAGTCCGTCCGAAGTTACCAGGATGAGGATATCAAAATTGTGGCGACGACtaacaaaaaagttaaaaaaactgttaaaaaagagaaaacaaaAAGAGATTCCTCCGAATCACCTGACAAGAAAAAAGGAGAGCCTATTGATGTCAAGAAACGGACGTATATCACGATGAAGGGGCGTCGCAGAAAACTCGACGATTTCACTAGAACGAACTACGATATTGTGGAGGACGGATACAAGTGTAAGATGTGTGGCAAGCTCATCACAGGTAGGGCTGCGATGAAAAGCCATTTCAAGAGCCACTCGGGGCCCATGTCCTGCTCCGAGTGCAACAAGGACTTCACCAGCAAGCAGCTGTGGGCCAAGCATTACAAGAAGGTTCACTGTTCGTACACCGAGGTGTGCCGCGAGTGTGGGCGCGCCTTCAAGCACCAGGACCATCTGAAGGCGCACATGAAGGTGCACTCCATGGCACGGCCTTTCGAGTGCCAGTACTGTGGCAAGGGATTCCGCAGCAAGAACAACATGCAGATGCACGTGCGTAGCCATCTCAACCTGCGCGAGTACTCGTGCGAGATGTGTGGAGTAGCGTACGTCACACCCAGTGCCCTCAGgtacCACATGATGACGCACAGCGGCGTAAAGCCTCTCATGTGCACCTTCTGCGACTACCGCACGGACAAGAGCAGCACCTTGACCCGTCACATCCGCAAGCACACGGGTGAGAAACCCTTCACTTGCTCCTTCCTCGGCTGCAACAAATCCTTTGCGGCCGGCAACGAGCTCACCCGCCACTGCCTCTCCCACACAGGGGAAAAGCGCCACGCCTGCGAGAAGTGCTACAAGACCTTTAGACGGGCCGACGCATACCGCAAACACATGATGAAAAAACACAAGGTGCAGAACTTCCAAATCATTCGGAAGACGAGACTCATTCTGGAAGACGTCGTGGAGAGCTTGCATACGACCGGTCAGTCGGCTTCCGAAAATCTAACCGCAGCCGTCAACGCGGGCTCGCTTAATGCAAATGCTATTACAAACATGGGAGTCAACAACATCACTTTGAACAATATGGGTGTTAATAATATCGGTATCGTAAACATGGGAGGCACGGATGTCGTGGTCGCTGATGGAAATATGGCTATTCCCGGAATGGCAAATGCTGCCACCAGCACGAAGGAACTGGAAGAGATCGTCAAAAGAGaaaagaaattgattaaaaacgagaaaaaagaattcaaaattatgtaa
Protein Sequence
MSSIFGPAKEDGVILSEKINYCVDIQVYENDGLPEKICNLCEEELNVSMTFKKKCLESNNILCTIKNFRCNVKLETEDLTPKDEDAESERSYQDEDIKVALMNVKKVKKTVKKEKRRDSSELPDKKKGKIKKPKYTRKVDDFTKTNYDVVEDGYKCKMCGKLITGRAAMKSHFKSHSGPMSCSECNKDFTSKQLWAKHYKKVHCSYTEVCHKCGRAFKHQDHLKAHMKVHSMARPFECQYCGKGFRSKNNMQMHVRSHLNLREYSCEMCGVAYVTPSALRYHMMTHSGVKPLQCTFCDYRTDKSSTLTRHIRKHTGEKPFTCSFVGCDKAFAAGNELTRHCLSHTGEKRHACEKCYKSFRRADAYRKHMMKKHKVQNFQIVRKTRLILEDVVESLHTTGQLASENLTAAVNAGSLNANVITNMGVNNITLNNMGINNIGIVNMGGTDVVVADGDMAIPGMSNAATSTKELEEICNVKVETEEPTPKDEDAESVRSYQDEDIKIVATTNKKVKKTVKKEKTKRDSSESPDKKKGEPIDVKKRTYITMKGRRRKLDDFTRTNYDIVEDGYKCKMCGKLITGRAAMKSHFKSHSGPMSCSECNKDFTSKQLWAKHYKKVHCSYTEVCRECGRAFKHQDHLKAHMKVHSMARPFECQYCGKGFRSKNNMQMHVRSHLNLREYSCEMCGVAYVTPSALRYHMMTHSGVKPLMCTFCDYRTDKSSTLTRHIRKHTGEKPFTCSFLGCNKSFAAGNELTRHCLSHTGEKRHACEKCYKTFRRADAYRKHMMKKHKVQNFQIIRKTRLILEDVVESLHTTGQSASENLTAAVNAGSLNANAITNMGVNNITLNNMGVNNIGIVNMGGTDVVVADGNMAIPGMANAATSTKELEEIVKREKKLIKNEKKEFKIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-