Basic Information

Insect: Eubasilissa splendida
Gene Symbol: -
Assembly: GCA_031772225.1
Location: CM062872.1:1947756-1959890[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.2e-05 0.0043 18.4 2.0 1 23 68 90 68 90 0.98

2 20 0.41 34 6.2 6.0 1 23 96 118 96 118 0.97

3 20 1e-05 0.00082 20.7 0.5 1 23 124 146 124 146 0.98

4 20 0.00027 0.023 16.2 4.9 1 23 152 174 152 174 0.98

5 20 5.3e-05 0.0044 18.4 1.9 1 23 180 202 180 202 0.97

6 20 0.0015 0.13 13.8 2.3 2 23 209 230 208 230 0.97

7 20 0.0024 0.2 13.2 0.9 1 23 262 284 262 284 0.97

8 20 4e-05 0.0033 18.8 1.6 1 23 290 312 290 312 0.98

9 20 0.00014 0.011 17.1 5.1 1 23 318 340 318 340 0.98

10 20 2.1e-07 1.7e-05 26.0 1.3 1 23 346 368 346 368 0.98

11 20 0.00069 0.057 14.9 0.7 2 22 375 395 374 395 0.95

12 20 3.3e-05 0.0027 19.0 2.4 1 23 645 667 645 667 0.97

13 20 0.0069 0.57 11.8 3.2 1 23 673 695 673 695 0.98

14 20 0.00022 0.018 16.5 3.1 1 23 701 723 701 723 0.98

15 20 0.00011 0.0091 17.4 1.7 1 23 729 751 729 751 0.98

16 20 0.022 1.8 10.2 7.2 1 23 757 780 757 780 0.95

17 20 0.00015 0.013 17.0 2.9 1 23 786 808 786 808 0.99

18 20 0.0011 0.095 14.2 7.5 1 23 814 836 814 836 0.99

19 20 0.052 4.3 9.0 2.6 2 23 843 864 842 864 0.96

20 20 0.0039 0.32 12.5 0.7 2 23 871 892 870 892 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.2e-05	0.0043	18.4	2.0	1	23	68	90	68	90	0.98
2	20	0.41	34	6.2	6.0	1	23	96	118	96	118	0.97
3	20	1e-05	0.00082	20.7	0.5	1	23	124	146	124	146	0.98
4	20	0.00027	0.023	16.2	4.9	1	23	152	174	152	174	0.98
5	20	5.3e-05	0.0044	18.4	1.9	1	23	180	202	180	202	0.97
6	20	0.0015	0.13	13.8	2.3	2	23	209	230	208	230	0.97
7	20	0.0024	0.2	13.2	0.9	1	23	262	284	262	284	0.97
8	20	4e-05	0.0033	18.8	1.6	1	23	290	312	290	312	0.98
9	20	0.00014	0.011	17.1	5.1	1	23	318	340	318	340	0.98
10	20	2.1e-07	1.7e-05	26.0	1.3	1	23	346	368	346	368	0.98
11	20	0.00069	0.057	14.9	0.7	2	22	375	395	374	395	0.95
12	20	3.3e-05	0.0027	19.0	2.4	1	23	645	667	645	667	0.97
13	20	0.0069	0.57	11.8	3.2	1	23	673	695	673	695	0.98
14	20	0.00022	0.018	16.5	3.1	1	23	701	723	701	723	0.98
15	20	0.00011	0.0091	17.4	1.7	1	23	729	751	729	751	0.98
16	20	0.022	1.8	10.2	7.2	1	23	757	780	757	780	0.95
17	20	0.00015	0.013	17.0	2.9	1	23	786	808	786	808	0.99
18	20	0.0011	0.095	14.2	7.5	1	23	814	836	814	836	0.99
19	20	0.052	4.3	9.0	2.6	2	23	843	864	842	864	0.96
20	20	0.0039	0.32	12.5	0.7	2	23	871	892	870	892	0.92

Sequence Information

Coding Sequence: ATGGAAACCTCAGATCCTGAGCAGGTTTGGATCAAGTCCGAGCCTCCAGAAGCCGCCCCCGAGTTAGTAGTCGAAGTTTGCCATCGGGACATGAAGAAGGACCGCTCGGAGAGGTCCACCAAAACTGaTCACAAGGGCGACCGCAAAGATGACGACACTAACAAAAAAGAAATTACACAAAACAACTCTGAACAAAAAAAGTTCACATGTCCCGTGTGCGGATAccgatgtaaatatttatcaacgCTGAAAAGTCATCAAATCATACACACGGGAGAGAAGATGTTTTCTTGTAAAGAGTGCAGTTTTAAAACAGCCCACAAGCACACCTTGAAGGGACACACGCTGTCgcacaccggagagaaaccCTTTTCCTGTGACATATGCGGCTTCAAGTTCGCCTTTAACGGGACTCTGAAAATTCACATGCTGACccacactggtgagaaaccgttttcgtgttcacagtgcagttaCAAGTGTTCTCAGAACAAGAACTTGAAGTCGCACATGATGATACACACCGGCGAGAAGGCCTTCGCTTGTCACATGTGCGACGGAACGTTCAACAGGAAGCGCACCCTGGCCAATCACATTCAGACGCACACCGGTGAGAAGCCGCTGTCTTGTTCGGAGTGCAGTTACAAGTGCATTCGGCAGGCGAGCATGAATATTCACATGCGCAGGCATCCCGGTGTAAAGCCTGCCGGGAAACGGCGTGGCGTTTGTACAGATTTACCGACACTGAAAACTCACAAGGTCACCCACATTGGTGAGAAATCGTTTTCTTGCGAAGAGTGCAGTTTTAAAACTGCGTACAAAGTTACCCTGAACCGACACATGCTGCTGCACACCGGAGAAAAAAAGTTTTCGTGTAGCATATGCGGCTTTAAGTTCAGATTGAGTTTCACCTTAAAAATTCACATGTTAACACACACTGGCGAGAAACCGTTTTCCTGTTCTGAATGCAGTTACACGTGTTCTCAGAATAAATACTTGAAGTCTCACATGATGACGCACACCGGCGAAAGGGCTTTCGCTTGCAGCATATGCGGCAGGACGTTCAACAGGAAGCGGAACCTGTCCGATCACCTTCGGACGCACGACGAAAAGAAACCAGTTTCTTGTCCAGAGTGCGGTTATAAGTGTTTCCGTAAAGGCAGCATGAATATTCACATGCGTAcTACTGCCCGACCGGACTTTACGAGAGAGAATGGTGCGGTGCTGGAACGCCGGTCCTTTGGCGCTCCGTATCGATATGGTGACGTGGCCTCTGCCGACCGCGCGTTTGTTGTAACAATGCAGCATCGGCTGGAGGGACACAGATGCCCTGCCGACCAGCAGCTTCCTAGGTGCAAATGCTTGAGATCTGGAGAGCAAGACGGCCAAAAGCGAGAGCTTCTTGGGCCCGCGCGGCAGTTCACTTCGGCCAACTCACTGGGGATAGAGCGGTGCTGCATCCCTGTAATGCAGCAGGTACCGAAACAGAGGAAAATGGACTATCCTCCTGGTACGTGGTTTGAAACTGATATAAAGTTTGTCACCCGCCTTCTTAGCGTTCCAACTATCTCAATCATCAAAACAGAGCCAGCGCAGCGCTCCGAGAGCGGCGACGAGGAGACACCCGATGATGAAGAAAACGTGACGCGTTTTCGAGACGCCAAGGACGCTGTTGGTATTAGAAACGTTATTACGATCAAGACTGAACCGAGTTCACGCGTAGAGGAGGTCGTAGAGCCAGGAGCCAAGATTGACTTTGGGAGGCAAGATGTTGGTGTGGTCAAGCCTGAACCGGAGACCCTCGTCGCGAATAAGGCATTATCAGAAACATCCAAAAATGCTAGTCAAGAAACAGGTTTTCAATCGAAAAAGAAAGACCTGATAGACCTCAACGCCTCTCGTGCGAACCGGAAGAAAAACTGCGTAAGACCGTTCGCGTGCTCCAAATGTAACTTCACATACACAACAAAAGACAGTGTTAAACGACATATGCTGACTCATaccggagagaaaccgttttcatgtgcTGAGTGCAGTTACACCTGTTCTTGGAAGCAGAGTCTGAAACGTCACATGCTGACCCACACCGCTGAGAAACCCTTCTCCTGCGAGTACTGCAGCTATGTCTGCTCACTGAGAGGGAACCTAAAAAATCACATGACAACGCATACGGGAGAAAAACCGTTTTCTTGTCCCGAATGCAGTTATATTACCGCAAAAAAACACCTCTTAACAGATCACATGCGAACGCACACCGGCGAAAAACCATTCAAGTGTCCCATGTGCAACTACACCTGCTGCCAGAAGCAGCGACTGCGACGTCACAACATGGTTTACCACGCAGCCGAGAACCCGTATGTCTGTAAAGACTGCAGTTACAAATGCACCAAGGCCGGAGATATGAAAAGGCACATGTTGACGCACACGGCCGAGAAATCGTTCAAGTGTTCGGAGTGCAGTTATGTGTGCATCAAAAGACACCATCTGCGCGATCACATGCGCATCCACACCGGGGAAAAGCCGATCTCGTGCGCGAAATGCAGTTATACGTGTTCGTGGAAGAACAGCCTTAAGCGTCACATGATCTCGCACAATGGCGAGAAACCGTTCGCGTGTATCGAGTGCACTTACAAGTGCGTTACGGCCGCGGATTTAAAAAGGCATATGCAAATTCACACGAAATAA
Protein Sequence: METSDPEQVWIKSEPPEAAPELVVEVCHRDMKKDRSERSTKTDHKGDRKDDDTNKKEITQNNSEQKKFTCPVCGYRCKYLSTLKSHQIIHTGEKMFSCKECSFKTAHKHTLKGHTLSHTGEKPFSCDICGFKFAFNGTLKIHMLTHTGEKPFSCSQCSYKCSQNKNLKSHMMIHTGEKAFACHMCDGTFNRKRTLANHIQTHTGEKPLSCSECSYKCIRQASMNIHMRRHPGVKPAGKRRGVCTDLPTLKTHKVTHIGEKSFSCEECSFKTAYKVTLNRHMLLHTGEKKFSCSICGFKFRLSFTLKIHMLTHTGEKPFSCSECSYTCSQNKYLKSHMMTHTGERAFACSICGRTFNRKRNLSDHLRTHDEKKPVSCPECGYKCFRKGSMNIHMRTTARPDFTRENGAVLERRSFGAPYRYGDVASADRAFVVTMQHRLEGHRCPADQQLPRCKCLRSGEQDGQKRELLGPARQFTSANSLGIERCCIPVMQQVPKQRKMDYPPGTWFETDIKFVTRLLSVPTISIIKTEPAQRSESGDEETPDDEENVTRFRDAKDAVGIRNVITIKTEPSSRVEEVVEPGAKIDFGRQDVGVVKPEPETLVANKALSETSKNASQETGFQSKKKDLIDLNASRANRKKNCVRPFACSKCNFTYTTKDSVKRHMLTHTGEKPFSCAECSYTCSWKQSLKRHMLTHTAEKPFSCEYCSYVCSLRGNLKNHMTTHTGEKPFSCPECSYITAKKHLLTDHMRTHTGEKPFKCPMCNYTCCQKQRLRRHNMVYHAAENPYVCKDCSYKCTKAGDMKRHMLTHTAEKSFKCSECSYVCIKRHHLRDHMRIHTGEKPISCAKCSYTCSWKNSLKRHMISHNGEKPFACIECTYKCVTAADLKRHMQIHTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -