Espl033153.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062872.1:767859-769586[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00027 0.022 16.2 4.1 1 23 9 31 9 31 0.97 2 15 1.3e-05 0.0011 20.3 1.0 1 23 37 59 37 59 0.98 3 15 5.5e-07 4.5e-05 24.7 0.6 1 23 65 87 65 87 0.98 4 15 0.0048 0.4 12.2 1.6 1 23 93 115 93 115 0.97 5 15 5.4e-05 0.0045 18.4 0.3 1 23 121 143 121 143 0.97 6 15 3.8e-06 0.00031 22.0 2.9 1 23 149 171 149 171 0.97 7 15 0.0082 0.68 11.5 5.8 1 23 177 199 177 199 0.98 8 15 0.0016 0.13 13.8 0.2 1 23 258 280 258 280 0.96 9 15 4.9e-05 0.0041 18.5 2.6 1 23 384 406 384 406 0.98 10 15 0.0022 0.18 13.3 5.4 1 23 412 434 412 434 0.98 11 15 1.7e-06 0.00014 23.1 0.6 1 23 440 462 440 462 0.98 12 15 1e-05 0.00084 20.7 1.4 1 23 468 490 468 490 0.98 13 15 5.6e-06 0.00046 21.5 1.1 1 23 496 518 496 518 0.97 14 15 8e-05 0.0066 17.8 0.2 1 23 524 546 524 546 0.98 15 15 6.8e-05 0.0056 18.1 0.9 1 23 552 574 552 574 0.98
Sequence Information
- Coding Sequence
- atgaTTCACAGCGGAGAGAAACCCTTCGCTTGTCACGTCTGTAGCTACGCGGCCTCCCACGCCAGCCATTTGAAGAGACACGCCCGGACACACACAGGCGAGAAACCCTTCTCCTGTGAACAATGTGGACAGGCGTTCGCACAGACTGGACATTTAAAAGATCATAAACGTGTGCACACCAAAGAGAAACCTTTTGTATGTGAAGAATGTGGAAAAATGTTCTCGCAAGATTCAAACCTAAAACTGCACAAGAAAATTCATTTGGGAATCAAACCGCATCGCTGTGTTGTGTGTGGAACGGCGTTCTTGCGCGCCTGCGACCTGAAAACTCATCTGATGATTCACACAGGGCAGAAATCGTTCGCCTGTAGGGTGTGTAGTTACGTCACTTCGCGGGCGAGCGAATTGAAGAGGCACGCGCGCGTCCACACAGGCGAGAAACCTTTTTCTTGCGAAGAATGCGGGCTTTCATTTTCTCACaaaagcaatttaaaatatcataaaggtACTCATTTAGAGGATAAACCTTATAAGTGTGACGTGTGTAGCTACAGAACCTCACACGCTAGACTGTTAACAAAACACAGACACTCTCATTCTGTTCGATCAAATATGACCCTTAGTAAtcgtgaattattatttcaaaatatacgagAATTAGATGATAAAGCTACTTCTTCCGAAAATATGTTATCTTCTAGATCTCTTAATAAAGAAACAGTTTTTAAACGCGTTGGAAATAACGAGAAAAATATATCACTAGTGAAACACTTTGCTTGTGAACAATGTAGTAAAGAGTTTTCTAAAGCAGTCGACTTGGATAGTCATAGAACGATTCATTTAGatgaaaaattgttgaaatctAAAGAAACAAGACATAAAGTGCGTGCACAATCTTTGATATGCAGCGAAAGTGACGGAACTATCTCACAAAAGAAATCATTTGAAGAGATCTTAGATACTGAGGAAATAACAATTTTGGAGCCAGTATGTCCTTACTCGCAGAAAGATATCATAAAAACTGAAGTGGTTCATTCAAAATCTGAAGATGAATCGAATCATTCACATTCGCAGTCAGATTGCACTAAGGAACAAATGATCGTTCAGAAAATCGAAATGAATAAACAAAAGTGCACCGTAGAAAAACGATTCACGTGCGAAGTCTGCGGCAACTCGTTCTCCCGCGCCAGCAACTTGAAATGCCACAAAAGAATCCACTCGAATTTAAAACCTTACTCGTGCTCCGCGTGTAGCTACAAGGCGTCGCACGCGAGCCACTTGAAAAGACACCAACGAAAGCACACCGGAGAGAAGCCGTTCTCCTGCGAAGAGTGCGGCTCGTCCTTCTCGCAGAGCGGCCACTTGGTCGCGCACAGGCGCGTGCACTCGCGGGAGAAGCCCTTCTCGTGTGACTCGTGCGAGCAATCATTTTCGCAAGTTTCCAACCTGAAGATACATAAGCGGACCCACACGGGTGAGAAACCGTTCCGCTGTTGCGAATGCGGACAATCGTTTACGAGGGCCGGCGACCTCAAGACTCACGGGATGATTCACTCCGGGGTTAAGCCGTTCCGGTGCGGACGATGCGGCTACGCCGCGTCGCGCAGGGGCGAGCTAAAAAGGCACGCGCGCGTACACACGGGAGAGCGCCCCTACACGTGCGAAGCGTGTGACAGCGCCTTTGCCAACATGAGCAATTTGAAACATCATATAAAGAGTCACAAATAA
- Protein Sequence
- MIHSGEKPFACHVCSYAASHASHLKRHARTHTGEKPFSCEQCGQAFAQTGHLKDHKRVHTKEKPFVCEECGKMFSQDSNLKLHKKIHLGIKPHRCVVCGTAFLRACDLKTHLMIHTGQKSFACRVCSYVTSRASELKRHARVHTGEKPFSCEECGLSFSHKSNLKYHKGTHLEDKPYKCDVCSYRTSHARLLTKHRHSHSVRSNMTLSNRELLFQNIRELDDKATSSENMLSSRSLNKETVFKRVGNNEKNISLVKHFACEQCSKEFSKAVDLDSHRTIHLDEKLLKSKETRHKVRAQSLICSESDGTISQKKSFEEILDTEEITILEPVCPYSQKDIIKTEVVHSKSEDESNHSHSQSDCTKEQMIVQKIEMNKQKCTVEKRFTCEVCGNSFSRASNLKCHKRIHSNLKPYSCSACSYKASHASHLKRHQRKHTGEKPFSCEECGSSFSQSGHLVAHRRVHSREKPFSCDSCEQSFSQVSNLKIHKRTHTGEKPFRCCECGQSFTRAGDLKTHGMIHSGVKPFRCGRCGYAASRRGELKRHARVHTGERPYTCEACDSAFANMSNLKHHIKSHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -