Basic Information

Insect: Eubasilissa splendida
Gene Symbol: -
Assembly: GCA_031772225.1
Location: CM062845.1:12791353-12809402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0028 0.23 13.0 0.2 3 23 76 96 75 96 0.97

2 17 3.2e-06 0.00026 22.2 0.7 1 23 102 124 102 124 0.98

3 17 5.8e-06 0.00048 21.4 2.7 1 23 130 152 130 152 0.99

4 17 8.1e-05 0.0067 17.8 2.7 1 23 167 189 167 189 0.98

5 17 9.5e-05 0.0078 17.6 0.7 1 23 204 226 204 226 0.98

6 17 7.7e-06 0.00064 21.0 3.8 1 23 241 263 241 263 0.98

7 17 9.6e-07 7.9e-05 23.9 1.5 1 23 297 319 297 319 0.98

8 17 0.00017 0.014 16.8 2.8 1 23 325 347 325 347 0.98

9 17 0.043 3.5 9.3 0.9 1 23 354 376 354 376 0.98

10 17 2.1e-06 0.00017 22.8 1.6 1 23 382 404 382 404 0.99

11 17 0.045 3.7 9.2 1.8 1 23 411 433 411 433 0.98

12 17 2.6e-06 0.00021 22.5 1.5 1 23 439 461 439 461 0.99

13 17 0.0015 0.12 13.8 1.0 1 23 468 490 468 490 0.99

14 17 1.4e-05 0.0012 20.2 1.6 1 23 496 518 496 518 0.99

15 17 0.0022 0.18 13.3 0.3 1 20 524 543 524 546 0.93

16 17 9.9e-05 0.0082 17.6 1.7 2 23 553 574 552 574 0.97

17 17 3.8e-06 0.00031 22.0 1.4 1 23 580 603 580 603 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0028	0.23	13.0	0.2	3	23	76	96	75	96	0.97
2	17	3.2e-06	0.00026	22.2	0.7	1	23	102	124	102	124	0.98
3	17	5.8e-06	0.00048	21.4	2.7	1	23	130	152	130	152	0.99
4	17	8.1e-05	0.0067	17.8	2.7	1	23	167	189	167	189	0.98
5	17	9.5e-05	0.0078	17.6	0.7	1	23	204	226	204	226	0.98
6	17	7.7e-06	0.00064	21.0	3.8	1	23	241	263	241	263	0.98
7	17	9.6e-07	7.9e-05	23.9	1.5	1	23	297	319	297	319	0.98
8	17	0.00017	0.014	16.8	2.8	1	23	325	347	325	347	0.98
9	17	0.043	3.5	9.3	0.9	1	23	354	376	354	376	0.98
10	17	2.1e-06	0.00017	22.8	1.6	1	23	382	404	382	404	0.99
11	17	0.045	3.7	9.2	1.8	1	23	411	433	411	433	0.98
12	17	2.6e-06	0.00021	22.5	1.5	1	23	439	461	439	461	0.99
13	17	0.0015	0.12	13.8	1.0	1	23	468	490	468	490	0.99
14	17	1.4e-05	0.0012	20.2	1.6	1	23	496	518	496	518	0.99
15	17	0.0022	0.18	13.3	0.3	1	20	524	543	524	546	0.93
16	17	9.9e-05	0.0082	17.6	1.7	2	23	553	574	552	574	0.97
17	17	3.8e-06	0.00031	22.0	1.4	1	23	580	603	580	603	0.97

Sequence Information

Coding Sequence: ATGCCTTGCATAAACCCTTTCCCTTCTGAGAGACTGTTCAAAAGTATAGAATGCATTGTACAGGCGGTTGTGTTAGGGCTGGGCACGGTGCATACCAGGTCGGAGAGGCAGTGGGGTGTTCCGAGTCCCAGGTATGCGAGCCCTGTGAAGACTGCTAATGCGGTGGGGCTGGGCACGGTGCAGGCCAAGCTGGAGGGGGGAGTGGGGCGCTCCAAGCCCCAGGCGTGCAAGCTCTGCGGCAAGCTGCTGTCCTCGGCTTCTTCCTACTATGTGCATATGAAACTGCACTCGGGGATCAAACCTTTCGCGTGCACGGTTTGTGATGCAGCCTTCTGTAGGAAGCCCTACCTGGAGGTTCATATGCGTACACATACCGGGGAGCGCCCCTTTCAATGCGAATTGTGCCTCAAGAGGTTCACGCAGAAATCTAGTCTTAATACGCACAAGCGAGTCCACACagATGAGCACATGCGAGCTCTGGTGCTGAAGGAGCGGCCCCACCAGTGTGACGTGTGCCAGATGAGGTTCACGCAGAGCTCCAGCCTCGGCCGCCACAAGAAAATACACACCGAGGAGCACAGGCGTGCGCTGCTGGCCAAGGAACGGCCCTACCAGTGCGAGGTCTGCTTTGTTCGCTTCACGCAGAAGTCCAGCCTGGGACGCCACGGGAAAATACACACCGAGGAGCACAGACGCGCCCTGTTAGACAAAGTGCGGCCTTACCAGTGCCACATCTGTTACATGCGGTTCACTCAGAAGTCCAGCCTCAACCGTCACGGGAAAATCCATACCGCTGCACAGATTCAGCCAGAGAGCGGGAGTTTGAGCGTAGTTGTTTTGTACATTATAGAGGATCACATGCGCTCGCTGATCAACAAAGTGCGTCCGTTCCAATGCGAAGTCTGTGACAAGCGCTTCACTCAGAAGTCCAGCCTGGGCACACATAAACGCATTCATACCGGAGAGCGTCCCTTCCAGTGCACCGTCTGCCTCAAGTCATTCACACAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTCCAGGGCAGGCCGTTCCAGTGCGCCGCGTGCCCTGCTGCCTTCACCTGCAAGCAGTACCTGGAGATACACACGCGCACGCACACGGGTGAGCGGCCCTACCAGTGCGAGCTGTGCCTCAAGACCTTCGCACAGAAGTCCACGCTCAATGTCCACAAACGCACACACTCAGTCCAGGGCAGGCCCTTCCAGTGCCTGCAATGCCCGGCGGCCTTCACCTGCAAGCAGTACCTGGAGATACACAACCGCACGCACACCGGAGAGCGCCCCTATCAGTGTGAAGTCTGTCTCAAACGCTTCGCGCAGAAGTCTACACTCAATATACACAAGAGAACCCACACAGTGCAAGGGCGGCCTTTCCAGTGCATGCAGTGCCCAGCTGCCTTCACCTGCAAACCCTACCTGGAGATACACATGCGCACGCACACGGGTGAGCGGCCTTACCAGTGTCAACTGTGCCTCAAGAGGTTTGCGCAGAAGTCCACGCTCAACATCCACAAGCGCATCCACACCGgtgaaCGTCCTTACGCTTGTGACATCTGTCAAAAACGATTTGCTGTCAAGAGTTACGTAACGGCACACAgaTGGTCACATGTTGCGGAGAAGCCTCTGACGTGTGACCGCTGTACAATGACCTTCACATCCAAGACTCAATTTGCTCTGCATATTCGCACCCACTCAGCCGGCCAGTGTTATGAGTGTAGTGTGTGTGGCCGCACATTTGTCAGAGACAGCTATCTCATCAGGCACCACAACCGAGTACATCGAGAGAATCATAGTAACGTGTCTGCTAACAGTATTGCCACCATCAACAGTGTTGCTACAAACACTAACACATCCAGTGCTTTTGATTCACCTGGTGTTTGTGATCTAAGCCAGAGTGCTGTCATTCTGCTACTCAAGATATTTAAGAAGTGA
Protein Sequence: MPCINPFPSERLFKSIECIVQAVVLGLGTVHTRSERQWGVPSPRYASPVKTANAVGLGTVQAKLEGGVGRSKPQACKLCGKLLSSASSYYVHMKLHSGIKPFACTVCDAAFCRKPYLEVHMRTHTGERPFQCELCLKRFTQKSSLNTHKRVHTDEHMRALVLKERPHQCDVCQMRFTQSSSLGRHKKIHTEEHRRALLAKERPYQCEVCFVRFTQKSSLGRHGKIHTEEHRRALLDKVRPYQCHICYMRFTQKSSLNRHGKIHTAAQIQPESGSLSVVVLYIIEDHMRSLINKVRPFQCEVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFQCAACPAAFTCKQYLEIHTRTHTGERPYQCELCLKTFAQKSTLNVHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCEVCLKRFAQKSTLNIHKRTHTVQGRPFQCMQCPAAFTCKPYLEIHMRTHTGERPYQCQLCLKRFAQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVAEKPLTCDRCTMTFTSKTQFALHIRTHSAGQCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIATINSVATNTNTSSAFDSPGVCDLSQSAVILLLKIFKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -