Espl021243.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- Znf131
- Assembly
- GCA_031772225.1
- Location
- CM062859.1:30208268-30222169[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.7e-05 0.0031 18.9 4.9 1 23 18 40 18 40 0.94 2 19 0.0024 0.2 13.2 4.7 1 23 46 68 46 68 0.97 3 19 3.4e-06 0.00028 22.2 5.4 1 23 74 96 74 96 0.98 4 19 0.00016 0.013 16.9 3.9 3 23 104 124 104 124 0.98 5 19 2.3e-06 0.00019 22.7 1.7 1 23 130 152 130 152 0.99 6 19 0.69 57 5.5 0.1 1 11 158 168 158 172 0.87 7 19 1.2e-05 0.001 20.4 2.5 1 23 322 344 322 344 0.96 8 19 0.0018 0.15 13.6 1.0 1 23 352 374 352 374 0.96 9 19 0.00077 0.063 14.8 1.0 1 23 381 403 381 403 0.97 10 19 6.2e-05 0.0051 18.2 3.3 1 23 423 445 423 445 0.98 11 19 2.6e-06 0.00022 22.5 1.8 1 23 454 476 454 476 0.98 12 19 2e-06 0.00017 22.9 2.7 1 23 482 504 482 504 0.98 13 19 4.4e-06 0.00037 21.8 2.6 2 23 511 532 511 532 0.97 14 19 2.2e-06 0.00018 22.8 0.8 1 23 538 560 538 560 0.96 15 19 0.0099 0.82 11.3 4.5 1 23 566 588 566 588 0.93 16 19 2.6e-05 0.0022 19.4 1.4 1 23 594 616 594 616 0.98 17 19 0.014 1.1 10.8 7.7 1 23 622 644 622 644 0.98 18 19 1.6e-06 0.00013 23.2 1.9 1 23 650 672 650 672 0.99 19 19 0.0027 0.23 13.0 0.6 1 20 678 697 678 700 0.93
Sequence Information
- Coding Sequence
- ATGGGACACTGCTTCAATATACACCGACGCACCCACACCGGAGAGGCTCCATTCTTGTGTTCCGAGTGTGGAAAGTGTTTTACTACAGAATGCAATCTGAAACAGCACATAGTGAGACACTCAGGACTCAAACCATTCGCCTGCCATCTTTGTCCCACAAAGTTTAATAACAAAGGAACTCTAACTTGTCACATTAGGACGCACCTCGGTGTGCAGTCATATATATGTGACACTTGTGGACATTCCTTCACTCATTCGAGTGCACTGAAGAAGCATAAGCGAACACATCTCGGACTGAGGCCCTGGGGATGTGATTCTTGTACTAAAAGGTTTTCATCTAAGGAGCATTTGAAGAGGCATCTTCTTATTCATACTGGTGAAAAGCCCTACAAGTGTCAGTACTGTGACAAGGCCTTCAACCAGACCTTTAACCTCGCTGTCCACACTCGATCACACGTCGGGGATAACCTCTACCAATGCACTGTCTGCAGCGAGAGGTTTCGTTTACTCAGCGACTGCGATGTGGACCTTGTCTGCCGGTCGTGTATGAAGGAAGACCCTGTGCTGGTGGATCTGTTTAATAACATGGATGATTCCCTTCCCCTGAAAACAACGCTTACATTGGCAGATATTTATATGATCTGCACCCCCGTTCAGGTGGTGAAGGAAGATGGGCTGCCGCAGAAGCTGTGCGAGAGTTGTATAGAAAGTTTAACATCGGCGTACGCGTTTCGAACTCAATCCGAAAGGAACGATGTGATACTTCGAGACttagtgaaaaatcaaattGAAGAATCAAAGaatgtcaaaattaaacaaGAGCCTGAtgtagatatagattttaagCAAGAAGACACTGAAGAAAACTTAGAAGAAGATAATTTTGTCGATGAAACTTATTCTCCAGAGCCAGAagttaaaaaaaagagaaaaattaaaaaaatacgcatCAAGAATGGGCCACATGCCTGCAGCGAATGCGGGAAACAGTTCTACAAGTCCTCGAGACTGGAGAAACACATGAAGGTGCACGTGAAAGTAAAGAAAGAGTCCCATATGTGTGAGGTgtgcaaaaaaacatttttaaaaatatccggTCTGAATCGACACATGGCCATACATGATGCGGAGAGCAAACCGTTTGAGTGTTCCCAGTGCTTCCAGAGGTTCAAGAGGGAAGGCCTCCTCCTTCGCCACAAGGCCGTCCACACCACGGGGATAGACGCTCAGCTACTGGAAAGCAAGGAAGCAATCGCGCAGTCTTCCTACCACTGCGAGGACTGCAGCATGGTATTTGAATCTCGCCACTCGCTGTCCAGCCACATGCGGATTCACAAGGAGAAGGTGAAACAGAAAAACTTCTCATGCCAAGTGTGCGACAAGAAGTTCTCCTCCAAAAATCCGCTCAACCGGCATATGAAATTGCACTCGGAGGATAAACCGCACAAGTGCACCATCTGCGACAAGCGCTACTCCCGCCAGGACCAGCTTCTCGACCACATCAACAAGCACAATGGGGTCAAACCCAACGTTTGTCCGTTCTGTACTAAAGCTTTCTCCCAGCTGTGCAACCTGAAGGACCACATGAGAACTCACACGGGAGAGACGCCGTACCTGTGCTCGCAGTGCGGGAAAGGTTTCAATAACGGCTCCAACCTCCGGCAGCACATGATGAGGCATACGGGGCTCAAGCCGTATTCGTGTCACCTGTGTCCGAAGAGGTTCTCCACTAAAGgtCAAATGACGTGTCACGTGGGGACGCATTCGGGTGCACATCCATACGTGTGTGACACGTGCGGGCACGCTTTTACTAAGCCCAACTCCCTCAAGAAGCATAAACTCATCCATCTCGGGGTCAAACCGCATGAATGTGATGTCTGCAGCATGagATTCTCCTGTAAGGACCACCTGAAGAGACATTACCGGATCCACACGGGAGAAAAGCCTTACAAGTGCACGTACTGCGAGCGAGCCTTCACGCAGAGTAATGATCTGGTTAAACACACGCGGTCACACATTGGGGATAATATTTAcaaGTGTACAGTGTGTTTGGAAAGTTTCCGCCTTCTCAGCGAGTTAAAGAATCACTATCCGATGCACTACAGTAAGAATGGTTCCGACGAGCAGGTAACATATGAAAAGTCACAGGGAGAAGAGTCTCCTCAGACGTCGGAGGACTCCAAGACTTTGATCTCCTTCGACAAGCATTTAGACAAGACGGTCATATCCCAGATAGTACTGAGTAGCGACAGTTTAGATTACCAAAATGTAGAAACTAAGAATGAACCAAAAGATGTCCTCAATGAAGACATACAGTCGCCCGATGTCCAAATATACGTTGTCGACGCCTCGTTCTCCAACACATCACTTAACAAAACaatgtaa
- Protein Sequence
- MGHCFNIHRRTHTGEAPFLCSECGKCFTTECNLKQHIVRHSGLKPFACHLCPTKFNNKGTLTCHIRTHLGVQSYICDTCGHSFTHSSALKKHKRTHLGLRPWGCDSCTKRFSSKEHLKRHLLIHTGEKPYKCQYCDKAFNQTFNLAVHTRSHVGDNLYQCTVCSERFRLLSDCDVDLVCRSCMKEDPVLVDLFNNMDDSLPLKTTLTLADIYMICTPVQVVKEDGLPQKLCESCIESLTSAYAFRTQSERNDVILRDLVKNQIEESKNVKIKQEPDVDIDFKQEDTEENLEEDNFVDETYSPEPEVKKKRKIKKIRIKNGPHACSECGKQFYKSSRLEKHMKVHVKVKKESHMCEVCKKTFLKISGLNRHMAIHDAESKPFECSQCFQRFKREGLLLRHKAVHTTGIDAQLLESKEAIAQSSYHCEDCSMVFESRHSLSSHMRIHKEKVKQKNFSCQVCDKKFSSKNPLNRHMKLHSEDKPHKCTICDKRYSRQDQLLDHINKHNGVKPNVCPFCTKAFSQLCNLKDHMRTHTGETPYLCSQCGKGFNNGSNLRQHMMRHTGLKPYSCHLCPKRFSTKGQMTCHVGTHSGAHPYVCDTCGHAFTKPNSLKKHKLIHLGVKPHECDVCSMRFSCKDHLKRHYRIHTGEKPYKCTYCERAFTQSNDLVKHTRSHIGDNIYKCTVCLESFRLLSELKNHYPMHYSKNGSDEQVTYEKSQGEESPQTSEDSKTLISFDKHLDKTVISQIVLSSDSLDYQNVETKNEPKDVLNEDIQSPDVQIYVVDASFSNTSLNKTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -