Espl032331.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eubasilissa splendida
Gene Symbol
-
Assembly
GCA_031772225.1
Location
CM062871.1:765369-782476[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3e-06 0.00025 22.3 1.8 3 23 127 147 126 147 0.98
2 16 5.6e-06 0.00047 21.5 0.6 1 23 153 175 153 175 0.96
3 16 4.8e-05 0.004 18.5 0.6 1 23 181 203 181 203 0.98
4 16 8.4e-06 0.00069 20.9 0.9 1 23 209 232 209 232 0.97
5 16 2.5e-05 0.002 19.4 3.0 1 21 238 258 238 259 0.95
6 16 2.9e-05 0.0024 19.2 0.9 1 23 446 468 446 468 0.99
7 16 4.8e-06 0.00039 21.7 0.6 1 23 474 496 474 496 0.97
8 16 8.5e-08 7e-06 27.2 1.3 1 23 502 524 502 524 0.98
9 16 4e-06 0.00033 21.9 0.6 1 23 640 662 640 662 0.98
10 16 7.4e-05 0.0061 18.0 0.3 1 23 668 690 668 690 0.97
11 16 3.4e-06 0.00028 22.2 3.2 1 23 696 718 696 718 0.96
12 16 8.8e-08 7.2e-06 27.2 1.3 1 23 724 746 724 746 0.98
13 16 5.3e-06 0.00044 21.6 0.6 1 23 752 774 752 774 0.97
14 16 2.4e-07 2e-05 25.8 1.6 1 23 780 802 780 802 0.98
15 16 1.3 1.1e+02 4.5 3.7 1 23 808 830 808 830 0.97
16 16 2.9e-06 0.00024 22.4 0.2 1 23 836 858 836 858 0.97

Sequence Information

Coding Sequence
ATGGATGTGAAGCAAGAACCAGATTCTTCAGATGAAGGCGTCTGGATCAGTGTTCCACCAATGGACGTTCGTCCTGACATCGGAGCGGAGGCTCCAGACCCCTGCTCCGGGCCGAGCGGCGTACGGACGCCTCCTGACTATCCCGTGGAAGTCTGGGTCGCCGACATCAAGAAGGAATGCGCTGATGCAGGCGATGGCATTCCTCTGGAGTGTGaAAAAGTTGGCTTAAAAAAGCGTTCCCCGTTGAGCATGATGGACTACGGGCTGGAAGAAGGTCGGAACTCTTCAACAGATTTATCGCAGTTCGCGCGTGGTGAAGTTGAAGATCTTCAGCATTCTACAGCTAAGACAGCACAAAAAATCGTCAAGACTGAAGCTTGCGAATTCTGCGATAAATCGTTTAATTCAAAAAGTAAATTGCTGAGGCACTTGAGATCTCACACCGGAGAACGGCCGTATGCTTGTGAAAACTGCCAGAAAAAGTTCACCCAAAAGTCGGATTTGTCGAGACACGCCATAATTCACACGGGGGAGAAACCGTACTCTTGTGAGGTGTGCAAAAAAACGTTCGGTCAAAAGATTACATTAGGCGTGCATATGAAAAGCCACACTGAAGAGAGGCCCTTCGCATGTGAACTGTGCGGAAATAGGACGTTTCGCCAGAAGAGCAATTTAGTTCAGCACATGAGGAGTCACGCGGGGGACAAACCTTTCTCCTGTAAAGACTGCACAAAATCTTTTTGTAGAAGAAGATCGTTACTCAAACACATGGAAATAATGACAAAGACGGGCGCAGAAAGAGCCCGGGAGTATCGAGCTCGAATCCGAGCAAGAAAACCGCCCAAGAAACCGCCCAAAAGTCGACTGGAGTGCACTAGAGCTTGGAGAGAACGAAAGAAGCAGCTCAAGTTGCGCCTGAAACACGGTGATACGTCAGACACATCCGCGCCGTCAACCAGTAGTGTTCCACCTACCGGCACCACAAGCGATCCCCCAATAAAGGAAGAAACAAACATGCTTGCTTCGATAGACATTCCGTTGTTTGTCCAGACACCCAGTGTCGTCGTGAAGCAAGAACCAGATTCAGACGAAGGAGTTTGGATCAGCGTTCCATCACTGAGCGATTCTGCCATCAAATTGGAACCTTCTGAGAGCGGTGAAGGGCCGAGCGGCAGACAAACGCCACCTGACTATACTGTAGATGTCTGCGTCCCCGACATTAAGAAGGAATGCTCTAGGAGTTCAGATGCAGCTTTGGGCGATGGCTCTCACATAGAGTGTGgtaATGTCGCAACAAATCCTTTGGCGAATGATATAAAAACGGATCAGAAGCGATTCACATGTGAAGAGTGTCAAAAAACTTTCATTTGGAAGAACAATTTAGTAAACCACATGCAAACTCACACGGGACAGAAACCATTCGCCTGTGACAACTGTGAGAAAGCGTTCAATAAGAGGGCCAACCTGTTGAGGCATTTGAGGTCCCACACGGGAGAAAAACCGTTCACTTGTGAAGACTGCAAGAAAACGTTTACACGAAAAAATACACTAGAAGCGCACATAAGAATTCATACCGGGGAGAGACCCTACGCTTGTgtagCCAGTATGGAAGTGAAGCAAGAACCTCGCGATTCTCCCGACGGGGGAGTTTGGATTTGCGTTCCTCCGCTAGATGCTAGTTCTGGTATCAAACAGGAAGCTCCTGACTCTGAAGATGGGCTGGGCAGCAGACGCATGCCTCCTGACCACGCCGTGCCCGCTGCTCGGCCCGTTGACGTAAAGACGAAATGCGCTTCAGATTGTAATAGTACCCACAATAGCTGTATGTCCCTGCTGAAGGTCACTGCCCAGCCACCTGCGCACGATGTGAAACACGACCTGGAAAGAGAACATAAAACGCGCGTAGATGAGAATCGTTTCTCTTGTACAGACTGCGCGAAGGCATTTACAAACAGTCGGGACTTATCGGCTCACTTGAAGACGCACGCGGTACTAAAAGCATTCTCCTGTGAACCTTGTGGGAAAGCGTTCCGTCAAAAGCGTGATCTCTTGGTGCACGCCAGAAGTCACACGGGAGAAAAACCGTTTCTTTGCAAAAACTGCACGAAAACATTTACCCGAAGAGACACTCTAGTGAACCACATGAAGACCCACACAGGCGATAAACCGTTCACCTGTGAAGGTTGCAGTAAATCCTTCAGCCAGAGATCAAACTTGTTGAGACACATGACCATACACACGGGTGAGAGACCCTTCGCCTGTGGAGAGTGTAGGAAAACTTTTAGCCGAAGAGGCCTCTTGGTGAATCACATGACGACGCACACCGGAGTGAAGCCATTCAGCTGCGAAGACTGTGagaaatctttttataataaacggGATTTGGTGAAACACATGCGAatgcatactggagagaaacctttTTCTTGTGAAGAGTGTGAGGATTCATTCGGTTGTAAACGTGCCCTTAAGAAACATAAGAAACGACACGCGGGACATAGAGCCTTTGCCTGTGAAGGGTGCGAGAAATCATTTAGTCTGAGGGTTAATTTAGTGAGACACATGAAAATCCACACGAGAGATAAAGCTACGCTTGTAGATACTGTAAACAGATGTTTTGTTCATGTTGtaccttaa
Protein Sequence
MDVKQEPDSSDEGVWISVPPMDVRPDIGAEAPDPCSGPSGVRTPPDYPVEVWVADIKKECADAGDGIPLECEKVGLKKRSPLSMMDYGLEEGRNSSTDLSQFARGEVEDLQHSTAKTAQKIVKTEACEFCDKSFNSKSKLLRHLRSHTGERPYACENCQKKFTQKSDLSRHAIIHTGEKPYSCEVCKKTFGQKITLGVHMKSHTEERPFACELCGNRTFRQKSNLVQHMRSHAGDKPFSCKDCTKSFCRRRSLLKHMEIMTKTGAERAREYRARIRARKPPKKPPKSRLECTRAWRERKKQLKLRLKHGDTSDTSAPSTSSVPPTGTTSDPPIKEETNMLASIDIPLFVQTPSVVVKQEPDSDEGVWISVPSLSDSAIKLEPSESGEGPSGRQTPPDYTVDVCVPDIKKECSRSSDAALGDGSHIECGNVATNPLANDIKTDQKRFTCEECQKTFIWKNNLVNHMQTHTGQKPFACDNCEKAFNKRANLLRHLRSHTGEKPFTCEDCKKTFTRKNTLEAHIRIHTGERPYACVASMEVKQEPRDSPDGGVWICVPPLDASSGIKQEAPDSEDGLGSRRMPPDHAVPAARPVDVKTKCASDCNSTHNSCMSLLKVTAQPPAHDVKHDLEREHKTRVDENRFSCTDCAKAFTNSRDLSAHLKTHAVLKAFSCEPCGKAFRQKRDLLVHARSHTGEKPFLCKNCTKTFTRRDTLVNHMKTHTGDKPFTCEGCSKSFSQRSNLLRHMTIHTGERPFACGECRKTFSRRGLLVNHMTTHTGVKPFSCEDCEKSFYNKRDLVKHMRMHTGEKPFSCEECEDSFGCKRALKKHKKRHAGHRAFACEGCEKSFSLRVNLVRHMKIHTRDKATLVDTVNRCFVHVVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-