Espl020449.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062859.1:7779551-7780003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-09 1.9e-05 25.3 0.0 3 38 17 52 15 54 0.95 2 2 1.9 5.8e+03 -1.9 0.0 33 44 131 142 131 143 0.84
Sequence Information
- Coding Sequence
- ATGCCTCGTAATTATAGCAGGACCAGCAACAGACAGTCGCGGGAGACGGAAAAAATGGCAAAGGCAATTTTGGAAGTTGCAAGCGGAAGAATGGGCTATAGAATGGCAGGCAAACAGTTTAAGGTTCCTCCGAGTACTTTAGAAAATCGTCTCAAAATTTATCGTGGATGTGGAGACGTGCAAACTGCTGCTCAGAAGAAAATGGGACGATTCAAACCAATTTTTTCTCCTGATCAAGAAAATACCATTGCAGCTCACGTTTTGACTATGGAAGATGGTTTATCCGGCCTTTCCTATAAAGACTTACGTGCACATGCTTTCCAAATGGCGAAGATAAATGGAATACCCAATAACTTTAACAAAATCACTCAATTGGCGGACGGCGACTGGctgtataactttttaaaacgtCACCCGAATCTTAGCCTGCGAGCGCTCGAGCCACTGGCTTAA
- Protein Sequence
- MPRNYSRTSNRQSRETEKMAKAILEVASGRMGYRMAGKQFKVPPSTLENRLKIYRGCGDVQTAAQKKMGRFKPIFSPDQENTIAAHVLTMEDGLSGLSYKDLRAHAFQMAKINGIPNNFNKITQLADGDWLYNFLKRHPNLSLRALEPLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -