Espl035055.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- bab1_1
- Assembly
- GCA_031772225.1
- Location
- CM062873.1:28686088-28714382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 2.7e-14 53.6 0.0 1 43 151 194 151 196 0.95 2 2 2.5 7.9e+03 -2.3 1.5 6 15 278 287 276 292 0.87
Sequence Information
- Coding Sequence
- ATGAGTCGGAAGCTTTATTTACCGAACCAACCCGACCGGGCAGATCAAAGGCGACGGTTATATTCAGGAGACGCCGGCGTCTTCCTGCACGGGCATCCCGACGCGCCCCACGCTGCATCATGCAACACCGCAACAGGTCCCGTCGTAATTACAGCGATAAACTGCAATTACTGGAGACAGCGTAAGTGTTTAACGACTAAGGTGCGGGTGGTTGTGTGCACTCTCCATACGGGTCGCCACTGCGCTCCTTCCTCCGCCGTTCGCCGTTTCTGTGGGAAAAAGGCCAAGCTCTTGGAGAACTCGCACGTGTGGCTCGGCGCCTCTACCTCTTCGATTGCCGCAGACAGTTACCAGTATCAGTTGCAATCAATGTGGCAGAAATGCTGGAATACCAACCAGTCGCTGGTGCATAACCTGAGGTTCCGCGAGCGCGGCCCTCTGAAGTCTTGGAGGCCGGAGACGATGGCCGAGGCGATATTCTCCGTGCTGAAGGAAGGGCTGTCTCTGTCGCAGGCGGCCAGAAAATACGACATTCCCTACCCGACCTTTGTGCTGTACGCCAACCGGGTCCACAACATGCTGGGCCCGAGCGCTGACGGTGGAGCAGAACTACGGCCCAAAGGACGAGGTCGCCCACAGCGTATCCTGCTGGGCGTGTGGCCCGACGAGCACATCAGGGGAGTCATCAGGGCCGTGGTCTTCCGCGACTCTCACAGCGCCCACCACATTAAAGAAGAACCACTTCCTGCATATCCACCCATCAATGACGCCATGGCCTTGCAAAGCTATGGCAACGGAGGGGACGGAGGCATGTCCCCCGGCAGTGCCGCGGCGGCGGCGGTGGCAGCCGTGGCACACGGGCTGCGGCGGCAGGCGTGCGGCATGGCCGGGCCGCGCGCGCCCGCCTCCCCGCTGCGCTCGCCAGGCCCACCAGGATCTCCGGGGCCCCCGCTGTGCTCGCCGCCGCCGCCCGGGCTGGCGCTCGAGCCGTTGCCGCTGGCCGCGTCCAACGGAGAGCGCTTCCGCCCCTTCACGTCCCCGCCCCGCGCCGACAGCTACTTCCGCGAGGAACTGGAGCAGCTGGTGCGCAGCCCGCGCATGGTGCCCGATGCGGAGGTCAAGCTCGAGCCGCTTGCTGAGCAGCGAATGTAA
- Protein Sequence
- MSRKLYLPNQPDRADQRRRLYSGDAGVFLHGHPDAPHAASCNTATGPVVITAINCNYWRQRKCLTTKVRVVVCTLHTGRHCAPSSAVRRFCGKKAKLLENSHVWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHSAHHIKEEPLPAYPPINDAMALQSYGNGGDGGMSPGSAAAAAVAAVAHGLRRQACGMAGPRAPASPLRSPGPPGSPGPPLCSPPPPGLALEPLPLAASNGERFRPFTSPPRADSYFREELEQLVRSPRMVPDAEVKLEPLAEQRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -