Espl014868.1
Basic Information
- Insect
- Eubasilissa splendida
- Gene Symbol
- -
- Assembly
- GCA_031772225.1
- Location
- CM062854.1:20947971-20966740[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.95 2.9e+03 -0.9 0.2 17 24 167 174 165 174 0.87 2 5 1e-10 3.1e-07 31.0 0.0 4 39 245 281 242 285 0.90 3 5 7.2e-12 2.2e-08 34.7 0.1 2 39 297 334 296 337 0.93 4 5 7.7e-16 2.4e-12 47.4 0.0 2 45 352 396 351 396 0.97 5 5 1.2e-17 3.8e-14 53.1 0.0 1 42 403 445 403 446 0.95
Sequence Information
- Coding Sequence
- ATGCATAAAAAATGGCACGCGCCGCCCTCCCCGCCGACCATGCGCCTAGCAGTGACGCCGCTCGGTCTGGGTGTGTGCCTAGTTCACTTTCACTCTCGGCCTCCCATCCTCCCCGAAGGACTCGAGGTGATGACTGGCCACCCGGACTCCCCTACGGAGCCTGCAGGGCCCCCTCGACACAGAGAGGCCATGGGGCCCACGCCACAAGATGGGTCCGTGCATACTTCTCAACAACACAACGCATTTCTACACTCATTACaaaaTATCAGCAGCAGCAGTGAACATTTGAACTGTATGGAATCAGATTATGTTCTTCCTGTTCCGATGGCCCCGGCTGCGACTCCTGTCCAGGTTTCCACGATCGCGATGGATTCCCACGATCCCTCAATCCTCCATCAAGATGCTGCGTGCGGAAGCGACTCTTCGGTAGAtgttaaaattaagtttgaaaCGTTGAGATCGTTAAATCAGCAGACAACCTTGGATATGGATACGCATATGAGTCAGCAACAAGCCCAAAATCCAAATGTTTTAGATCATTCTATGATGCTAACTTCAGAGATGTTGGGCTTAATGCCCAGAGAACAGGAAACCGGTAAAGAagATATTCCTGTACACGATGAAATGAATGAATCCTGCCACGATTCGTCTAATGATGGAGTTTCACCCAGTTCGAGTGGATTAACAAACCTACATGGTACTGGAAGTATACCAAAGACTTGGTCCCAACAGGATATGGAAAATGCTTTGGATGCACTTCGAAATCATAATATGAGCTTAACAAAGGCATCTGCAACATTTGGAATACCTTCCACAACATTATGGCAGAGGGCACACAGATTAGGAATCGACACACCTAAAAAGGAAGGACCCTCAAAATCTTGGAGTGAGGGCAATCTTCATAGCGCTCTGCAAGCACTTAGAACAGGAACAATATCAGCTAACAAAGCAAGTAAGGCTTATGggaTTCCAAGCAGTACTTTATATAAGATAGCTAGAAGAGAAGGTATTAGGCTGGCGGCACCCTTTAATGCTGCTCCCACTGCTTGGAGACCCGGGGACCTGGAGAGAGCCCTTCACTCCATCCGCTCTGGGCATTCGTCAGTTCAAAGAGCCTCTACAGAATTCGGTATTCCAACAGgaACATTGTATGGCAGATGCAAGAGGGAAGGTATAGAACTATCTCGTTCCAACCCAACTCCTTGGTCGGAAGATGCAATGGGTGAAGCATTAGAAGCCGTTAGGATTGGACAGATGTCTATAAATCAGGCTGCAATACATTACAATTTACCTTACTCATCGTTGTACGGCCGCTTTAAAAGATGTAAATATGAAGGAGATATTAACGGGCCAGTTGATATATCTCCCCAACACATGCAAGATTCTCATGTTCCACATCATATGTTGCAGCAGTCATCTTTGGGCTCCCAAGGTGTTCATATGCTAGATCGTAATACGCCGCTAGACAGTTCTCAGCATCTATATTCTGTTTACCACCATCCCATTGTTCTTCCTGTATCGATACACAACCCTGGTGAGACTAGTAGTGTAAACCACAGTAATCAAGACTGCATTCCTATAAGTTGA
- Protein Sequence
- MHKKWHAPPSPPTMRLAVTPLGLGVCLVHFHSRPPILPEGLEVMTGHPDSPTEPAGPPRHREAMGPTPQDGSVHTSQQHNAFLHSLQNISSSSEHLNCMESDYVLPVPMAPAATPVQVSTIAMDSHDPSILHQDAACGSDSSVDVKIKFETLRSLNQQTTLDMDTHMSQQQAQNPNVLDHSMMLTSEMLGLMPREQETGKEDIPVHDEMNESCHDSSNDGVSPSSSGLTNLHGTGSIPKTWSQQDMENALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKEGPSKSWSEGNLHSALQALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRPGDLERALHSIRSGHSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYEGDINGPVDISPQHMQDSHVPHHMLQQSSLGSQGVHMLDRNTPLDSSQHLYSVYHHPIVLPVSIHNPGETSSVNHSNQDCIPIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -