Basic Information

Gene Symbol
kn
Assembly
GCA_031772225.1
Location
CM062853.1:18956178-18995247[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.6e-119 7.1e-115 385.6 0.0 209 387 155 342 150 345 0.98
2 2 4.5e-06 0.042 13.2 8.2 424 503 358 442 348 458 0.73

Sequence Information

Coding Sequence
ATGGGGTCCGTATTTGAGGTTATTAAACGGCCCATTGACCATTTAGATGCGGATTACTGGGGCCCTCGCTTAACATTATCCGACCCCAAATTAAGTTTTGCTACGGGGCTCGAACCAGATGGCGACTTCCTTGGTCATTATGTAACCAAAATTCGGTCGCAGCCTTCATTCTCCGCGGTCTTGGACATTGTTAATGCTACGTCTAGCGAGGCTCTGGTCATTTCTTGGACTCGGTCCATCTTATTGTTTCGGGCCAAACTGATTGATCTGGGACTTGTCGAGGACCAGTGGTGCGTCTGTGACCATGTGAAACAGACACTGGAGCATATACTCTGGGAGGATATGCTAGCGGGATTGGATTTGGCTGGTCATCGTCCGGTTCCGAACGATGACATgatgaggaacgaaagtaatTTCGGACTTTTACGGGAGTTTGTGGGTGTCTTGCTGGGAAATTTTAAGTCGGTGGTGATATCAACCCAAGTGGGGGTAGATGGCCCTTTGCTGGCCATCTCGGACAACATGTTTGTCCACAACAACTCCAAACATGGCAGAAGGGCCAAACGGCTAGACCCCACCGAAGCTGGTCTTTACCCTCCTTTACCAGTAGCGACCCCTTGTATAAAAGCTATTTCACCATCAGAAGGATGGACGTCAGGAGGATCAACGGTCATTATCGTTGGAGACAACTTTTTTGACGGTCTTCAGGTCGTCTTCGGTACTATGCTGGTATGGAGTGagCTCATCACATCCCACGCAATCAGAGTTCAGACCCCACCCCGCCACATTCCAGGAGTTGTTGAAGTGACGCTCTCATACAAGAGTAAGCAGTTCTGCAAGGGAGCTCCCGGACGATTCGTCTATGTCTCAGCACTCAATGAACCCACGATAGACTATGGCTTCCAAAGACTACAGAAACTTATACCAAGGCATCCAGGAGATCCAGAAAAGCTACCAAAGGAAATAATACTGAAAAGGGCGGCGGACCTGGCGGAGGCTCTGTACTCTATGCCCCGGAATAACCAACTGGGGCTCGGGGGGCCCCGCTCGCCACCCGGGGGTGGCATGCCCTCAGGCTTCAACTCCTACGCGGGCCAGCTGGCGGTCAGCGTGCAGGACTCGGCGGCTGCGCAGTGGACGGACGAAGACTACGGCAGAGGGCAGAGCGGTAGTGCTTCACCACGGGGCTCCGGCGGCGGGGGGGTACCAGGGGGCTACTGCTCCAGCGCATCAACCCCCCACTCGGCCCCACTTAACGGCTACGCCCCACCATCTCAGCTTTGCCAGGTCTCCTCCGCCCCCGGAATATTCAATTCATCCTCAATTGCGTACGGCGATTCATATTACAGTCAGGGTCACCACAACTCTGGCGGCCACTCGCAGGGCGGCAGTTACAAGGGTAAGGACAGGAGCGCCTTTCTACCAGTGCGCCACGGAACTCCGCCTTACAGAACCCTGGCCAACTGCCAGCATCTTGCTGTTCAATGTTAG
Protein Sequence
MGSVFEVIKRPIDHLDADYWGPRLTLSDPKLSFATGLEPDGDFLGHYVTKIRSQPSFSAVLDIVNATSSEALVISWTRSILLFRAKLIDLGLVEDQWCVCDHVKQTLEHILWEDMLAGLDLAGHRPVPNDDMMRNESNFGLLREFVGVLLGNFKSVVISTQVGVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPGGGMPSGFNSYAGQLAVSVQDSAAAQWTDEDYGRGQSGSASPRGSGGGGVPGGYCSSASTPHSAPLNGYAPPSQLCQVSSAPGIFNSSSIAYGDSYYSQGHHNSGGHSQGGSYKGKDRSAFLPVRHGTPPYRTLANCQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-