Basic Information

Gene Symbol
ARID4A
Assembly
GCA_031772225.1
Location
CM062861.1:3489692-3517542[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-29 6.7e-26 91.5 0.1 1 89 368 454 368 454 0.96

Sequence Information

Coding Sequence
ATGACCCAGTACGAGAGTAACAGAGTTCGCCGGAGACAGCCGCGACACGGACATCGCCAAACAGACCGAGCGAACAGAAGAAGATGCAAAACCAAGCAAGCGAAGGAAGAAGTCAAGCAGACCATTGGACGAGCTGAACGAGCCGTGAAGCAGACGGTTGGCAGACAGGGTCACCCAACACCACGACTTGGGATTTCGCAAGCGGATGATCCACCTTTTCTCTCCGTTGGAACCGATGTTAGTGCCAAATATAAAGGGGCTTTCTGTGAAGCTAAAATCAAGAAGGTTGTCAGGAACATTAAATGCAAGatAAGCTTCAAGACCGGGCCGAGCGCCGGCTCAGCAAGTACCGTGACCGATGAAGTTTTGAAGGGGACTCTTCGTGTCGGCAACACTGTGGAAGTTCGACAGGATAAGAAGGAAATGGTGGAAGCAATCATCACTAAAATCCAAGACTGTAGCCAGTATACTGTTGtttttgacGATGGCGACATCACAACACTCAGAAGGAGCGCTCTTTGCCTGAAGAGCGGGAGACATTTCGCCGAGAGTGAGACTCTGGATCAGCTGCCGTTGACGCACCCGGAGCACTTCGGCAACCCAGTTATCGGCTCCTCTGGTAGAAGGGGGAGACGAACAAATAGAACCCAATCGGACGACAGCGACAGTGAAGCGTGTGACACGAGCGGACCCACGACTAGCAGCGTGGAGCGTGAGCCGCATACGGGGCGCGTGGTGCTGGTGCAGTGCTCGGGCTCCGGAGACAAGAAACGGCCGCAGTCGAGCGGAGGCCAGCACTGGTTCCCTGGCCTCGTGGTGGCGCCGAGCGCGCAGGACACGGTCAAGATACGTGTCAAGGAGGATTACCTCGTGCGCTCCTTCAAGGACGGCCGCTATTACACGGTCCCAAAGAAAGAGGCGAAAGAGTTCCGGCGCAACAGCACCAATATGGAATTGGGAGGAGTCGAGGCCGCCATCTTGTATTTAGACAAAGGCGTATTGCCGCCGCACTGGGATAGAGATATCCTCTTCGGCCAGGAATCTCAGTCACAATCCGATGATGGAGATTCTGATGATaGTTCTGATGATGAGCCACGCGAGGAGAAGGATCACTTTGTGGCGCAGCTGTACAAGTTTATGGACGACCGTGGCACACCACTCAACCGTCAGCCCACCATTGCCAACAAAGACATTGACTTATACAGGCTGTTCAATgttgTTCAGAAGCTGGGCGGCTACAATAGAGTTACTAACCAAAATCAGTGGAAAGGAATAGCTAATCGGTTGGGGTTCCAACCAGCGACCACCAGTGTTACCAACCTCTGCAAACAGGCATATAAAAAATTCCTCCACAGTTTCGAGGAGTTCTACCGCAAGCTTGGGGTGACCCTGGTTGCTCACCCGAGGGGCGGACGTTCCACGGGGCGCAGCCTGATCAGGGACAGAGACAAGATACAGCACCAGGCATCCAGCCCTGCGCACACGACGACACACGAGgAAAAGCCCACTGAGCCCAGCCCTAAAGCTGTAGCAGCCTTAAAAGCAAAAgagaaagaaaaggaaaaagaaaaggaaaaagaaaaagagaaagaaaaagatttagaaaaggaaaataaagaAAGAGAAGCAAAAGAAAAGGAAATGAAAGAGAAGGATGCTAAGGAAGCTAAAGATGCGAAAGAAAGAGAATCAAAAGAGAAAGAACTGAGAGAGAGAGAAGCTGAAATTAAAGAAAAGGAAACTAAAGCTCTTATTAAAGAAATGGAACTCAAAGAAAAGGAAACTAAAGCGAAGGAGCGAGAAAAGGAAGCAAAAGCCAAGGAGTTAAAGGCGAAGGaggcaaaagaaaaaaaaatcaaagaggAGGAAGCCAAGGAAAAAGAAGCCAAAGAAAAACTTAAAGAAGTCAAACCCAAACAGAAGGAGAGTAAAGTGAAGGTAGAAATTGTAAATAGCAGTGATGAAGAAGACAGCGGAGACAATCAGCCACTAGCTCCACTCTCCAGCAAAATTGAGAAGGTGGACCCGCCTCCTCCTTCGGTGGAAAAGTCCGTTGCGGAGAAGCCTAAAGCGGCGGAGACTCCCGCCAAGGCCACAAAGCTATTCAAGAGTTCTTCTGGCGTAATTGAGGCCAAGAGGGGCGAGAAGGGGTCAACCAAAAAGGTGGGGCACAGGCGTAGCTCAATGCCCAAATGCAACACCAAAGACTCTCCGATGCCCGTTAAagTGGAGGCTCGTTGCAAGTCCTCGTCGAGTGACTCCTCCACGGCCGCCAAGAAGCCGTCGCACGAGAATGACAAGACCAAGGATAAGGAGCTGGCTTCGGCCAGGAAGGCGGCCGCCTCTTCGAGCGACAGAAATGACAGCGATAGTTCCAGTCGCGGCAGCAAGAATGGCAAGACACCGTCCAGGAGAAATGTAGCGGCAAGTGACACGCCTCCGTCCACACCGGGATCCTCTTCCAACATGCAGCTGCATCTAAAGAAGTCAAGAAAAAGGAAAATTACAGAATCATCGGATACCCCGGTGATATCGGCTGCCGTCGGAGACAAGCTTAAGGTGTTCTACGGCCCCGCGCAGTCCGAGTCCAAGGTCACGTATGAAGCCAAAGTCATAGAGGTGGACGGCAAGGGGCAGGAGACACTCCTTAGGGTTCACTACACCGGATGGAACACTAGGTATGACGAGTGGATCAAGCCGTCCAGGATTGCAGATAACCTGTCGCAGAAGAGCAAGCACAAGGATAAGgGAAGACGAAATACTCCAAATACTGGGACAGGACCGCCAGAGAGCCCCGGCGGGAAGAAGCCTCGTGGAGTTCAGCCACCGTCTGTCGCTCCTTCTACGCCGACGCCTTCGGCCAAACCTCACACCAGAAACAGGAGCAGCTCCAACAACACCACTGCTTCCAATCAACCGACTACGGatgcGTCAAACCACTCGGACTCGGATAGCGAGTGTGAGTCTGACTCTAGCGGACAGAGGGGTCCCAAGGTTCTGCAGGATGAAAGCAAATTACCTAAAGACAAACctGCCACTAGTGAATCATTATCGTCATCGCCCGTTGATAAAGCTCTGATAGAAccagaaaaagataaaaatgtgaaagtgACCAGAGTCAGTCGAAGTCCTCAAGTGAAGAGGAGCGCCGAAGGAACTCACAGCAGGGTCAAGAGGACGAGACTTAAGCAAGAGGACAGTGACACGCCGAGAGGAAGAGATTTCGATCTCAATGAGATTAGATCCGAACTGAAGGGCCTGGAGAAGACGGTGAAACCTTCTGCACCAGAGAGCATCGCACCGGAGGAAGAGAATGAATGTTCTAAAGAGGAACCCGCAGTTGTCATAAAACAAGAAAAGACACCAGAGAAGGTGACTGAAGACATTTACGAGTTTAAGGAGCCTGAACCGTTTGAATTTGAAGCCAGGAAATCGGAAGAGAAGAAGAAAAGATTAACGACTCACAGAATATTTGACGATCTTCCACAGTTAAAATTAAGTCCAACCTCTTCCTCTTTAGAAAAATCTCCCGTCGCTGAAGAAGATAATTCACCACCCAAATCGCATTATGACACTGTGTTTGACAAGTTGTGCGAGTCTGAAAACTATAATGTAGATGATAGCAACAATTCGGCGGAAAAGGAGGGCGAAACTCTATCGCTGTTTAGCGAGCTGGGCGGCGAGGACAGCGGAGACAGGCTGCTAATATCCGAGGCTGAGGACTCCCAGGAACCCCTTTTCACATATCATAAACAAGAACTGTTCCCGGAAAAGTCATTCTTGCCTATTTTTAAGGGCTTCACGCCAGCTAAAAATCAGGAGACATATTCCAAAAAAGATGCGACAAATAAGATGAGAGATGTTGATGATGAATTTACAAACAGCCCTGTCCTTAAAGGTGAACAATCTTCCGACGAAGACCCCATTGATGCGGCTATACAGAGAGTCAATGCTCATTCTATGTCAGATGACAGCAATGATGGTGAGCTTTTGATCAAAACCCCAGCGACACCCACTGCTCCCGCAGGCAGCATTTTGTTCCCACCTGAAGTGTTGAATAAAGACGAGCCGACTATGAAGACTGAAGAGCCGAAACCTGAGCCTCCGGTGGAACCGGTTAAAGTTAAGCAGGAACTTCAAAGTACAAATGTAGTCAGTAAGGAAACTTCCCCAATTGTAGTTAAGAAAAAAGAACAATTACCCCAAGAAATCAGTGAAAAGATAATTTCCACGACCATCGAAGACAGTGATTCccaattagatttaaaaagtgAATCGGAAGGTACGGCCTCGTACACCGATGTAATAATGCCGGAACCCCCGGCCTTCCTGATTCATAAGGAAGGTCCTTCCATAGCCGAAAAAGTATTACGTGCAATAAACGCAAAGAGGGCCGCTACTCCGACCCCTAAAGAGACAGTCAAACCCTTGAAAGTTGAATCtccaaaaataaccaaaataacaCTTCCAAAATCACAGGCTATAAAAATTAGTGCAATAAGTGTTCAAACTGCCAGTTCTACTTCCAGTTCTAAACCGATTGCTGTATCGGACTTGACACTctctaattcaattattattgatgttacCCAAGATCCAACTCACAAATTAGAGTTGCAGAAGGTATCCCCGAGGCCGGAAATTCCCAAGCAGAAAGAACCGGCGACGCCTGTTAGCGAGGCATTTTCGAAATTGGAATTGCCTGCGTGTAAAGCAGACAGTTTGCCCGTGGCTTCAGTCAAGAGGGAAACTGCAGAGCGCAGAAAGAGCGGGACAGAGTCCGGTCTGGGAGGGAAGAGTAATAAGGTACTCAGCGAGACGATACAGAAACTGTCGAGTCAGATTAGCCAACCGACGCCGCCGTTGCCGCTACCGGAATATCACACTGACGAGAGAAGTGAGGAATCTGATAGCGATGACTCTGACCGCAGGCTTATAATTGACAAATTAAGTGAAGAAGAATCCCAGAGCGGCATCAGCCTTTCCGAAAGCAATACGTCCCTTCCAGTCAAGGTCCAATCGGAAAAGTCCACAAACAATTGGAGGGGCACCGATTTGCAGCAGGATCAGGACAACGATAAGTCTTCCAACATTCCCGAATCTTCTTCCAAAGAACCTCCGATTACCAAGCAACCAGAGGAGGACAGCAACATATCACTGTTGCTTTGCGAAGAAACCATTCCGGGGAGTCCGGCTCCGGAGAATCTTGGAGAGGGAGCCAAAAGCTCCTCCAAACAGAGATCCAGGAATTTGGAGATTCCGTTTGCTTCCGCTCCCAGCATAAGCCCGGATCAGACTTCCAAAGATACTCTCTCATTGAAAGACATTCCGAGGGAGAATTCTCGCGATGGAATGAGAAATGAGCGCGAGCGCGAGCGAGAGCGGGACAGAGAGAGAGAACGAGAAAGGGAGAGGGAAAGAGACAGAGAGTGTATGGGAGGGAATGGTAACACGGCTGATATGGTATTGGATAATACTCCACCGATAACTCCCGATAGCAGCTTGGATAACATGTCTCCATCAAGGGAGCAACAGCTGTCAGATGGCGACAACCCGAATGATATGAAGGCCAATGAAGATGAAAACCGTGCAATGACGTCTTCCAAAAAAATGCACGACATGGAGAAAAGTAGTTCAGCCGGGAACCTCCGCGGCAGTGCCCCGGGCAGCCCCGGTGTGGGAGGCGTCCGCAGGGGGCGTCGTCCGCGCTCCCTGAGGGCCTCCGAGTGCGAGGATCACGGTGCCCAGGCGTCTGCGGCTGGGAACCTCCGCGGCAGTGCCCCGGGCAGCCCCGGTGTGGGAGGCGTCCGCAGGGGGCGTCGTCCGCGCTCCCTGAGGGCCTCCGAGTGCGAGGATCACGGTGCCCAGGCGTCTGCGGGTGTTCTCGGTGTGTCTCAGTACTCGCAGCATCGGCCACTCAAGTATAACTTTTACGTGGAATTGGATTCCTGCATGGACGGGGCGGCCCGTATAGCGCTGCTGACTTCGCGCCTCACAGACTTGAGGAAGGCGTACCACAGCGTGAAGGCCGAGCTGGCTACCATCGACAGGAGGCGTAAAAAGTTGAGGAGGAAAGAGAGAGAAGCGGTGAAGGCAGCCAAGGCAGCGTGTTCGTGA
Protein Sequence
MTQYESNRVRRRQPRHGHRQTDRANRRRCKTKQAKEEVKQTIGRAERAVKQTVGRQGHPTPRLGISQADDPPFLSVGTDVSAKYKGAFCEAKIKKVVRNIKCKISFKTGPSAGSASTVTDEVLKGTLRVGNTVEVRQDKKEMVEAIITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGSSGRRGRRTNRTQSDDSDSEACDTSGPTTSSVEREPHTGRVVLVQCSGSGDKKRPQSSGGQHWFPGLVVAPSAQDTVKIRVKEDYLVRSFKDGRYYTVPKKEAKEFRRNSTNMELGGVEAAILYLDKGVLPPHWDRDILFGQESQSQSDDGDSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRQPTIANKDIDLYRLFNVVQKLGGYNRVTNQNQWKGIANRLGFQPATTSVTNLCKQAYKKFLHSFEEFYRKLGVTLVAHPRGGRSTGRSLIRDRDKIQHQASSPAHTTTHEEKPTEPSPKAVAALKAKEKEKEKEKEKEKEKEKDLEKENKEREAKEKEMKEKDAKEAKDAKERESKEKELREREAEIKEKETKALIKEMELKEKETKAKEREKEAKAKELKAKEAKEKKIKEEEAKEKEAKEKLKEVKPKQKESKVKVEIVNSSDEEDSGDNQPLAPLSSKIEKVDPPPPSVEKSVAEKPKAAETPAKATKLFKSSSGVIEAKRGEKGSTKKVGHRRSSMPKCNTKDSPMPVKVEARCKSSSSDSSTAAKKPSHENDKTKDKELASARKAAASSSDRNDSDSSSRGSKNGKTPSRRNVAASDTPPSTPGSSSNMQLHLKKSRKRKITESSDTPVISAAVGDKLKVFYGPAQSESKVTYEAKVIEVDGKGQETLLRVHYTGWNTRYDEWIKPSRIADNLSQKSKHKDKGRRNTPNTGTGPPESPGGKKPRGVQPPSVAPSTPTPSAKPHTRNRSSSNNTTASNQPTTDASNHSDSDSECESDSSGQRGPKVLQDESKLPKDKPATSESLSSSPVDKALIEPEKDKNVKVTRVSRSPQVKRSAEGTHSRVKRTRLKQEDSDTPRGRDFDLNEIRSELKGLEKTVKPSAPESIAPEEENECSKEEPAVVIKQEKTPEKVTEDIYEFKEPEPFEFEARKSEEKKKRLTTHRIFDDLPQLKLSPTSSSLEKSPVAEEDNSPPKSHYDTVFDKLCESENYNVDDSNNSAEKEGETLSLFSELGGEDSGDRLLISEAEDSQEPLFTYHKQELFPEKSFLPIFKGFTPAKNQETYSKKDATNKMRDVDDEFTNSPVLKGEQSSDEDPIDAAIQRVNAHSMSDDSNDGELLIKTPATPTAPAGSILFPPEVLNKDEPTMKTEEPKPEPPVEPVKVKQELQSTNVVSKETSPIVVKKKEQLPQEISEKIISTTIEDSDSQLDLKSESEGTASYTDVIMPEPPAFLIHKEGPSIAEKVLRAINAKRAATPTPKETVKPLKVESPKITKITLPKSQAIKISAISVQTASSTSSSKPIAVSDLTLSNSIIIDVTQDPTHKLELQKVSPRPEIPKQKEPATPVSEAFSKLELPACKADSLPVASVKRETAERRKSGTESGLGGKSNKVLSETIQKLSSQISQPTPPLPLPEYHTDERSEESDSDDSDRRLIIDKLSEEESQSGISLSESNTSLPVKVQSEKSTNNWRGTDLQQDQDNDKSSNIPESSSKEPPITKQPEEDSNISLLLCEETIPGSPAPENLGEGAKSSSKQRSRNLEIPFASAPSISPDQTSKDTLSLKDIPRENSRDGMRNERERERERDRERERERERERDRECMGGNGNTADMVLDNTPPITPDSSLDNMSPSREQQLSDGDNPNDMKANEDENRAMTSSKKMHDMEKSSSAGNLRGSAPGSPGVGGVRRGRRPRSLRASECEDHGAQASAAGNLRGSAPGSPGVGGVRRGRRPRSLRASECEDHGAQASAGVLGVSQYSQHRPLKYNFYVELDSCMDGAARIALLTSRLTDLRKAYHSVKAELATIDRRRKKLRRKEREAVKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-