Basic Information

Gene Symbol
pnr
Assembly
GCA_947086405.1
Location
OX352260.1:331957-356496[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7e-18 2.9e-14 52.8 4.1 1 35 129 162 129 163 0.97
2 2 3.1e-18 1.3e-14 54.0 6.0 1 34 183 215 183 217 0.98

Sequence Information

Coding Sequence
ATGTTCGGGGGGAACGGCGGCGGGCACGGCGGCGCGGGCGGGTACGGCGGCGCGGGCGGGGGCGGGGGCGCGGGCGGGGAGTGCGGCGAGGGGTACGCGCTGGGCTACGCGGCGCCGCGGCAGTACGCGCACGCGCACGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACGCCGCCGCCGCCGCCGCGGCCGCGCACCACGACCAATACGGTGGCGGCGGCGTGGGCGGCGTGGGGAGCGTGGGCAGCGTGGGCGGCGTGGGCGGAGCTCTGTACCCACAGAACATGGTGATGGGGTCATGGTGCGCGCCCTACGACGCACTGCAGCGCCCGCCCGCCTACGATGGCGTGCTGGAGGCGTATGAGGAAGGGCGCGAGTGCGTCAACTGCGGCGCGAACAACACGCCGCTGTGGCGGCGAGACTCCACGGGGCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTCAAGCCGAGCAAACGGCTGAGCGCGGCGCGGCGACACGGCCAGTGCTGCACCAACTGCGGCTCGCGAAACACGACCTTATGGCGCCGCAACAACGACGGCGAGCCCGTCTGCAACGCGTGCGGACTGTACTACAAGCTGCACGGCATCAACAGGCCGCTGGCGATGAGAAAAGATGGAATACAAACGAGAAAACGGAAACCTAAGAAGTCTGCCAATGGCTCGAAGTCTGGCGCGGACGTCGCAAAGAAGGAAGGGAACAGCTCGCCCGGCATCGGGTCAGACGAGAGCAAGCCCAGCATATCGGACGTGTCGCTCCCGCTGACGGCGTCGCTGCAGCACGCGCCGGGCAAGCCGCGCGACGGCACGCCGGACGGCTCGCCGCACGCGCCCCCCCACTCCCACTCCCACTCGCACGCGCACCAAGCCCACGCGCACCAAGCCCACGCCCACGCGCACGCGCAGTACCCGCTGTCGCTGCCGGGCGCGCCGTTCCTGTCCAACGCGGCGCTGTTCAACATCAAGAGCGAGCCGAGCGCCGCCGCCGGCTACGAGGGCTACCCGGCGCACGCGCACGCGCACGCTCCCGGCGCGCCCGCGCAGCACTACCACTCCCAGCAGCACTATCTGCACGCCTTGCAGTACGGGCTGGGCGCAGGCGAAGAAGACGAGGGCAGCGGGTTCCTGCACCAGCGCAACGTGACTGCGCATGCCAAGCTCATGGCCTCCACGTAG
Protein Sequence
MFGGNGGGHGGAGGYGGAGGGGGAGGECGEGYALGYAAPRQYAHAHAHFAPHQNVWHHHAAAAAAAAHHDQYGGGGVGGVGSVGSVGGVGGALYPQNMVMGSWCAPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGSKSGADVAKKEGNSSPGIGSDESKPSISDVSLPLTASLQHAPGKPRDGTPDGSPHAPPHSHSHSHAHQAHAHQAHAHAHAQYPLSLPGAPFLSNAALFNIKSEPSAAAGYEGYPAHAHAHAPGAPAQHYHSQQHYLHALQYGLGAGEEDEGSGFLHQRNVTAHAKLMAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00994882;
90% Identity
-
80% Identity
-