Esul015467.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352263.1:762700-772863[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.3 1.7e+02 3.4 1.6 3 22 462 481 460 484 0.90 2 13 0.62 46 5.2 0.4 3 23 507 529 505 529 0.88 3 13 0.0012 0.087 13.7 2.7 1 23 543 566 543 566 0.95 4 13 1.3 92 4.2 3.2 1 23 571 595 571 595 0.92 5 13 1.6 1.2e+02 3.9 0.8 2 23 616 640 615 640 0.85 6 13 0.052 3.8 8.6 0.0 2 21 646 665 646 666 0.92 7 13 0.00089 0.065 14.2 4.1 1 23 724 745 724 745 0.98 8 13 4.6e-05 0.0034 18.2 0.2 1 23 751 774 751 774 0.96 9 13 0.00042 0.031 15.2 0.1 1 19 796 814 796 817 0.95 10 13 0.05 3.7 8.6 1.3 2 23 825 848 824 848 0.96 11 13 1.5 1.1e+02 4.0 6.5 1 21 855 875 855 877 0.91 12 13 0.012 0.9 10.6 2.5 1 20 883 902 883 904 0.94 13 13 0.52 38 5.5 0.6 1 23 914 937 914 937 0.96
Sequence Information
- Coding Sequence
- ATGTTGTCGCCGCGCGATGACGAGGACGACGACAACCATCTCTGCATCAAGTGCAACGCCACTATCGTCGGCCTCGACAACTATATCAAGCACAGAAAACAAAGATGTGCAAAAAGACCTGACGCGATAAAACAAATTCCTACTATAGAATCTCTGGAACCGACTTACAGTCTCGGAGCAGACGTATTCTTTCAATCATTGGAGCTCCAGAGCAGTGTGAAAAAGACCTCGCTGTCTATATTGACCCCTCCAATACCAATATCCAAAGCCAGTGTAGATAAAAAAACTGCCTTAGTTGTGGTAACAACGACTTCCACTGATCTTCCCAGAATAAGTCCTTTAGAAAGCAATTTAAGAGGTGAAGACTGGATTGGAGGTCACAGTCTGAAGATCGGCAGCAATGAAGACAATCAGACGAAATTAATTAATGCTGTTGCTAGTATTAGTGGCGTGGTTAAAAAAGATATACCAACTTCAACTTATAGTATTCCGTATAATGATTATAAAGGAGACGACGATTCTGAAGAGTCTGATGATTTAGAGGACGATGAGGACGAGGAGGGGCATGCTACTGGTGGGAAGTGGAAGCCTCCTCTACATTATACAGGTGGAAAATGGCGCCCTGCTTCACCGGAACACGAGGACTGGGATATCAGAGAGGAACAGGAACATACAGGTGGTAAATGGAAACTTATAATGGCAGATGCTAATGACCGTGAAGAAGACTACGATGCTCCACCACCAGACCACACCAAAGGAAAATGGGTACCAGGAGCTCACGAGAAAATTCAAATCATGCAAACGACAATACAAACAAAGGGATCTGTGCAGTATTGGTGTGGCCCTTGCAATAGGCGATTAGGTTCAAGAGCCATATATGAAAAGCATTTAATGTCTAACTTGCATATGAAGAAGGTGCTACCGGAACACGAGTTAGAATTTTCAGGACATCTGGAACCCATGAGAAACATTATAGACAAACGCACTACTCGACCGTCACGTTTTGTTGATGATAGTATTTACTCTCAGTCTCAGAGAAAGAAACTCATCACTTCGGACCAAAAATTTAACATGAAAATTGAGAAGAAAAAGAAAAGAAAGCGAAAACTTTCTTTTGTCCAATGCTCCGGCTGCAAATCTCGGGTAAGACTACATTTAATGGGAAAGCATCTTATATCCCATTATCACTTTAGGAAAACCACAGAAACTCATAGTGCCGAGTATCAGCAACTCATTTTGGATAATATGGTTGCTATAGTTCACCAGTCACCGTTTCAATGCAGTCCTTGCAAATTCTATACCAACTGGCAATCAACTTTTATGCAGCATTGGCATTCTGAGGAGCATAAAAATAAAACAGAATTTATAATTGGAAGATACTGGTGCTCCTTCTGCAAGTTCGAGTGTGAAACTTCGCAAGAAATGATACAACACATGTCAAGCTCCGACCATAACGAAGTGATCGCAGTGATCAATAGATCGATGCCTATTATCATTCGAAAGAGGACGGTGATCATATGTGAAACATGCTTTCAAGAATTTCGTTACAACATAGAAGCCAAACGTCATTCTCAAACAACTGGTCACAGGTTGAACCATACTGCTACTGACGATTACCAAGAACTCCACAAATGTCAAGACTGCAAAGCCAAGTTTAAATCTTCCGTGACTCTGGCAGCTCATTTGAAATTCAAGCATAAACAAAAGTGTTACCATTGTATGGTTTGCTCAAGGATTTTCCACTCTGCATTTGAAGCTAAGCAGCATCGACAGACGTCAGAACATAGGATAAGAAGGAAGGAGAACAAGAGAGGTATAGGACTTCCAACTGAGGATTTGAGTAAAAAGTGTCCATACTGCACTGAAAAGGTGGTACTGAAGAATGTTTTGGAGCTCAAGGATCACATTCGGACCGTCCATCCGAATTTAAAAAGGAAGTGCCCTACTTGTGGCATGTCCTTCGTCCTGTCACAGGAAGTATCCAGTCATGTCCGCGCCAAAGCTTGTCGGTTCCAGCGCTCACCTGTCGACGTCTCCATACTCTGGAACTGCAGCCAATGCCTCTTCACGACCGACTCGCAAGCTGAATGCTTCTTTCATGAAATTCTACACACGACCCCTATAACAGAAGTTCACGTGGTCAACAGCAAAGAGAAGTTGGTACAGAAGTATCAGTGCTCTCTTTGCCTGAAGAGTTTCCAAAAGGCGTCTTTGAGACATCATCTGAGACAGCATACGTTTGAGAGGCCGTTCGTTTGTTCGGTGTGTGGGGCCAACTTCACGAGGCAGGGCAGTTTGGCGAATCATTCGAGGAATGAGCATGGAAGCAAGGCATTCGAGGATCCAAAGCTGGACACAATCAAGGAAGATTCGACCTCAGAAAAGTACATTTGCGGTCAATGCAAGAAGGTATTTGATAGCAATTCCGCCCTGACCAGCCACGCATTTATCTGCAAGTTGTCCAGTAAAACGCGATGTCCAAATAAGGAATGCACGTTTGTTGGGACTACTGCAAGGCAGCTAGCGAGACATCATAAAATCCACGGCGAGCGAATCAAACACCACGAATGTATATACTGCACTTTCAAGAGTGACCAAGCGAGTCATCTGAAGAGACACATGCGTTGCCATCAAGGAGTCAAACCGTACGCGTGTCCTCATTGCCAGTTTACTTGTGGGAGTTTGGAAAACCTCCGGAAGCACGTCCTCCACAGCGGCCGGCACACGGGGCTCTTCCTCTACCAGTGCAACTCATGCGCACACCAGACCAACATGGCGGCCGAGCTGCGCACACATCTCACGTCTGCGCACGCGGATAAATATGACGCGAAGTCGGCGCGGCGAGCTGTCAAAGGGCATCTGATGGTGAACGAGCAACGTACCGACGTGCAGTGA
- Protein Sequence
- MLSPRDDEDDDNHLCIKCNATIVGLDNYIKHRKQRCAKRPDAIKQIPTIESLEPTYSLGADVFFQSLELQSSVKKTSLSILTPPIPISKASVDKKTALVVVTTTSTDLPRISPLESNLRGEDWIGGHSLKIGSNEDNQTKLINAVASISGVVKKDIPTSTYSIPYNDYKGDDDSEESDDLEDDEDEEGHATGGKWKPPLHYTGGKWRPASPEHEDWDIREEQEHTGGKWKLIMADANDREEDYDAPPPDHTKGKWVPGAHEKIQIMQTTIQTKGSVQYWCGPCNRRLGSRAIYEKHLMSNLHMKKVLPEHELEFSGHLEPMRNIIDKRTTRPSRFVDDSIYSQSQRKKLITSDQKFNMKIEKKKKRKRKLSFVQCSGCKSRVRLHLMGKHLISHYHFRKTTETHSAEYQQLILDNMVAIVHQSPFQCSPCKFYTNWQSTFMQHWHSEEHKNKTEFIIGRYWCSFCKFECETSQEMIQHMSSSDHNEVIAVINRSMPIIIRKRTVIICETCFQEFRYNIEAKRHSQTTGHRLNHTATDDYQELHKCQDCKAKFKSSVTLAAHLKFKHKQKCYHCMVCSRIFHSAFEAKQHRQTSEHRIRRKENKRGIGLPTEDLSKKCPYCTEKVVLKNVLELKDHIRTVHPNLKRKCPTCGMSFVLSQEVSSHVRAKACRFQRSPVDVSILWNCSQCLFTTDSQAECFFHEILHTTPITEVHVVNSKEKLVQKYQCSLCLKSFQKASLRHHLRQHTFERPFVCSVCGANFTRQGSLANHSRNEHGSKAFEDPKLDTIKEDSTSEKYICGQCKKVFDSNSALTSHAFICKLSSKTRCPNKECTFVGTTARQLARHHKIHGERIKHHECIYCTFKSDQASHLKRHMRCHQGVKPYACPHCQFTCGSLENLRKHVLHSGRHTGLFLYQCNSCAHQTNMAAELRTHLTSAHADKYDAKSARRAVKGHLMVNEQRTDVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994712;
- 90% Identity
- -
- 80% Identity
- -