Esul007508.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352273.1:3330865-3341861[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0044 0.32 12.0 1.6 1 23 369 391 369 391 0.94 2 10 1.4 99 4.1 2.8 1 23 425 447 425 447 0.89 3 10 0.012 0.85 10.6 0.4 1 23 452 474 452 474 0.99 4 10 0.0012 0.091 13.7 0.0 3 23 482 503 480 503 0.94 5 10 0.0062 0.46 11.5 0.2 1 23 515 538 515 539 0.92 6 10 1 75 4.5 3.2 2 23 578 600 577 600 0.96 7 10 0.0016 0.12 13.3 0.3 3 23 615 635 614 635 0.96 8 10 0.0024 0.17 12.8 0.2 2 23 641 662 640 662 0.95 9 10 3e-05 0.0022 18.8 1.9 1 23 668 690 668 690 0.98 10 10 2.8e-05 0.002 18.9 1.0 1 23 696 719 696 719 0.98
Sequence Information
- Coding Sequence
- ATGGTGTTATATTGTTGTGTGAAGGGATGCGGTAACAACACTAACAACAACAAGAAAAATCCAAGCGATGCAGTGTCGTTTCATGCGTTCCCTTCAAACTCGGAACTCAAGCTGAAATGGTTGCGGGCTATTGGTCGCCCAAATTGGGACCCTCCGAACCATATTCGCATTTGCAGTGTGCATTTCAGCGACGACCAGATCAGCCACGACAGGGTGCGGACACGGATCATGGACAACGCTTGCCCTGTTAATGCTTTACCTCCTAATTCAAACTTCGAGGCTTCATACATAGAAGCGTGCCGGTTCTGCCTAGCAACTGACATTAAGTTGTACAGTCTTGAGGGTGGAATGCTGAAGACATGCATGGAGTCTATTGCTGGATTTAATGAAACCATTCACATTGATGGCCTACCACAGTTTGTTTGTTACGAATGTGCAGCACATCTGATAAAATGCTACAAGCTGGTCGAGAAGAGTATCATGGCGCAGGCTACTTTACTTGATATCTTTGCACAACATGGCAAGATCACAAGGTGCCTCATAAATAGCCAAAACAGAAATAATTTAAATCTTACATCTTCACTAAGTCACAATACAGCTCCTACACCTTTATACGAGTTTCAATATGACGACCAACAGACCTCATTATGTCATTTTGAAATATACTGTCCTGAAAATTACCCTAGTAAAGAAGAAAATATTATTAATAACCATGAAGATTGTAAAGCGGAGAATAATTCTGAAGAATTCAGTATATTAGAGCCACAGAGCTATAATAAAATGGAAACTATTAAAAATGAAAGAGAAGAAACAAGTTCAATAAATAATGACCAAATAGACAGTGGTAGTGATGCAGAAATGTCACTAGAGGAAGTTAATTTTCTTGACGATGATGAAAATAAACTGCACAAAAAGTCCGAAATGGAAGAAAAGAAAATGGTAAGAAAAGATAAAAACAAGACTCAACATGAGATTAAAAAAAGAATACTTATGTGTGGACCTAAGTCTAAAGAAATGCAGGATCACTTTGAAGTAAAAAATATATTAACATTGCAGGACCAAATAAAAGAGTGGCAGAGATCAGTCGAAACAAAGCACCCTGTGCACCGATGTGAAGTATGTTCAAAGTCATTTGTGCACATCAACTCTTATCGGATTCACGTCGCTGCGCACGACCCGAGTCGCGGTGAGGCCGAATGTCCTGTGTGTAAGCTGCGCTTCAAATGCGTATCGAGCGCGTTGTCACACGCCCATAACATGCATAGCAAGAAGTTCCACTGCAAATCCTGCCCCAAGATCTTCAATACTATAAGAGTCGCGATGAAACACCACTTGTGGCACCGAGGACACCAGTACAAGTGCGCGCAGTGCGCCTTCAGCAGCGCGCACGCGTCGGCGCTGTACGCGCACGCGCGCCGGCACGCGCCCGCGCGAGGCATCGCGTGCGCGCGCTGCGGCCGCGCCTTCAACTCGCCCAAGGGGCTGGTCCAGCATCAGGCGGTCGCGCATCGAGGACAAGCGGTAGGTGAAGCAAGCCAAGAGTTCAGATGTGAGGAGTGCGGCCTCAGCTTCGAGTCGGAGGGCGCGCGGCGGGTGCACGGCCTCAGCGCGCACCACGACAAGAAAACCAGCAGCCTGCGCCCCGGCCCGCTGCGCGCCGCGTCCCCGCCCCTCCGCCCGCCCCGCCGGCGGAGGCCCTGCTACGCGCTGCCCGGCGACCGCTATCCGAAACAGTGTGACCATTGCGAAGTGGTGGTCAGCGACCGCAGCGAGCATTTTAGGCACGTACAGCGTCGACACAAGAGCGAGAGGGCATCCTACCGGCCCGTCATCTTAGCGATATGCGACACTTGCGGGAAAGGGTTCCAGAACACAGCAAAACTGCGTGTACACGAGCTGCGGCACGGCAGCCCGTCCGTGCGCTGCGAGTTTTGCCCCAAAGTGTTCTACGACAAGTACCGTCTGGCCGGGCACCTGGTCAGCCACAGCGACGCGCGCCCGCACCGCTGCGACACCTGCGGCCGCGGGTTCAAGCTGCGCGGCAACCTCGATAGGCACTACAGAGTACACACAGACGAGGCGACATACGAGTGCACACTCTGCGCCAAGAAGTTCAAGTACTCCGACAGCCTGAAACTGCACGTGCGCAGCGTCCACCAGAAAATACCGCTGCCACCCAGGAAGAAGAGGGCCAGGACTAAGACCACTGGTAGAGTTAGTAAACAGACAGAATAA
- Protein Sequence
- MVLYCCVKGCGNNTNNNKKNPSDAVSFHAFPSNSELKLKWLRAIGRPNWDPPNHIRICSVHFSDDQISHDRVRTRIMDNACPVNALPPNSNFEASYIEACRFCLATDIKLYSLEGGMLKTCMESIAGFNETIHIDGLPQFVCYECAAHLIKCYKLVEKSIMAQATLLDIFAQHGKITRCLINSQNRNNLNLTSSLSHNTAPTPLYEFQYDDQQTSLCHFEIYCPENYPSKEENIINNHEDCKAENNSEEFSILEPQSYNKMETIKNEREETSSINNDQIDSGSDAEMSLEEVNFLDDDENKLHKKSEMEEKKMVRKDKNKTQHEIKKRILMCGPKSKEMQDHFEVKNILTLQDQIKEWQRSVETKHPVHRCEVCSKSFVHINSYRIHVAAHDPSRGEAECPVCKLRFKCVSSALSHAHNMHSKKFHCKSCPKIFNTIRVAMKHHLWHRGHQYKCAQCAFSSAHASALYAHARRHAPARGIACARCGRAFNSPKGLVQHQAVAHRGQAVGEASQEFRCEECGLSFESEGARRVHGLSAHHDKKTSSLRPGPLRAASPPLRPPRRRRPCYALPGDRYPKQCDHCEVVVSDRSEHFRHVQRRHKSERASYRPVILAICDTCGKGFQNTAKLRVHELRHGSPSVRCEFCPKVFYDKYRLAGHLVSHSDARPHRCDTCGRGFKLRGNLDRHYRVHTDEATYECTLCAKKFKYSDSLKLHVRSVHQKIPLPPRKKRARTKTTGRVSKQTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00674362;
- 90% Identity
- iTF_00674362;
- 80% Identity
- iTF_00674362;