Esul012785.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352285.1:682480-702420[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0013 0.098 13.6 0.8 1 23 401 423 401 423 0.97 2 12 1.5 1.1e+02 4.0 3.6 1 23 430 452 430 452 0.93 3 12 7.9 5.8e+02 1.7 1.4 1 23 456 478 456 478 0.92 4 12 0.0022 0.16 12.9 4.9 1 23 483 506 483 506 0.97 5 12 0.0016 0.12 13.3 0.3 3 23 511 532 510 532 0.96 6 12 0.64 47 5.2 0.1 2 20 539 557 538 559 0.91 7 12 0.67 49 5.1 0.1 3 23 572 593 571 593 0.92 8 12 0.012 0.9 10.6 0.5 2 23 598 619 597 619 0.96 9 12 0.0052 0.38 11.7 0.1 3 23 654 674 653 674 0.97 10 12 2.2e-07 1.6e-05 25.5 0.8 1 23 680 702 680 702 0.98 11 12 6.5e-05 0.0048 17.7 5.2 1 23 708 730 708 730 0.98 12 12 0.00013 0.0094 16.8 3.6 1 23 736 759 736 759 0.98
Sequence Information
- Coding Sequence
- ATGGTAGTTTGTGCTGTGAAGTTGTGTAGGAACTACACGGGGAAAAACATAAAACCACCTGAAGGCATTTCCTTTCATAGATTCCCTACAGACCTGGATCAGAAACAAGAATGGATCCAAGCAATTCGCAGAGAACCAGACTGGGTCCCTGGCACCCACTGCAGAGTTTGCTCTGTTCACTTTGAGAACTCAGACTTCAAGATCTCGGAGACGGGCAGAAGGATACTTCACAAAGATGCTGTGCCAACAAAAAATCTGTATCAGGAGGAGAGATCTGAAACCCAGTATTCTGTTAAGAAAAGGATTCTTAAAAAAAGAaGACTCACCAGGTCTAAAGGTTCCGCCACACGCCCCGACCCAGCGTCCGACGAGGTTCAGGCGTGCCGCGCCTGCCTGGCTACAGACACGAGACTCTATAACGTTCATGACTGTGACCTGGTGCAGACGTTGAGTGATCTTACTGGATGTTTGGTGTCACCGACAGATGGCTTTCCACAACAAATTTGTAGTGTGTGCTACACACTGCTCCAAAAATACGCAGAGTTTAGAGCGAGATGCACGACCTCACAAGTGTTATTAGAAGACGCTCGCTCTGCGGAACACATGATAACGACAGAAGTTGTTAATGGTATAGACAGGGCACTGCACCGTTTGAATCTTCCTCTAACTATAAAAAGACAGCCTATTATAGATTTAACAGAAATCAACATAAAACAGGAGCATTTAGATCTCTTATTAGAAGAGGACAGCAATATCGACTCTAGTCACATAATAGATGACGCTTACGATATATTCGATGAGAAGGACGAACAAAAATTGGATGATTTTAAAACTGAAAATGATGAAGTAGTGAATGATGTCGCCCACGACAGAATCGACAGCATTTATGCTGATGTCATTCCAAAAAATGAAATTTTCATTGCAGTTGACGCAAAGAGGATACTAGAAAAAGAGAGCAGCAGTAAAAAAAGGAAATCAGAACTGAAAAGGAAAAGTAAAAAGCTTAAAAAAGAAGAAAATCTTAAAGTTTTAAAAAAGAATAGCAAAGAAGATATAAGAAATACTAAAGCAAGGAAAACAGAGGAAGACTACGATAATTTTGCTAAGATGTACAGTGTAGATATTACGTTTCTTACTAGAGAGGAGCAGATAGCTGAAGTGGAAGCGAGAAAGGAGAGTGATAACTATAAGAATTCTAGGTTCAAATGTGATGAGTGTTTTAAAGGTTTTACTGGGGAAGGTGCCTTCAAGAACCATAAAGCTAAACACGATCCTAGCATCGGCGCGTACGCCTGCGAGCCGTGCGGCTTCCGTTTCCCGAAGCGGTACAAAATGCTGCACCACCTCACGCACCACAAGATGAACTTCGTGTGCCGCCTGTGCGGGCACCTCACCAAGCTGCCATCGAAAGCGAAGGAACACTTTAAGTGGCACAACGGAGTCAAATACCCTTGCCACTTCTGCGAGAAGTCCTTTATTAAGCGCACGTCGCAGTTCAACCACATGCGCAACCGACACGGGTCGGCGTGCTGCGACATCTGCCAGGAGATATTCTCGGGGCAGCGCGGGCTCAGCGCGCACATGATCAAGGCGCATAAGGAGGCGGTGCGGTCTCGGTGCGAGTCGTGCGGCGTCCAGTTCCACAGCGAGGCGGCTCTCGGCAGACACGTCGACACGGCTCCTGACAACCTCTGCCAGCCTGGTACCAAAGCGTGCGCTCAGTGCGGAGAGAACTTCCTAAGTGAAGAGCAACTCAACGAGCACTCCAAGGAGAACCACTGGAAGGAGATTAAATGCGAAAAGTGCAACGCGAACTTCGAGAACGAGAAATTGTACCGCATGCACCGTATAGTGCACAAAGAGTTCCGGGAGCGGCGGCCGCGCTCCGAGCCCAAGGTGAAAGGAGCCAAGGTGTCCCGAGCAAAGTCCAAGAAGGTGCCCAAGATACAGAAGAGGATGTGCGAGATGTGCGGCCTCACCTGGCGGAGCTCGGCCGCGCTGAAGTACCACCAGCGAGTCCACACCGGGGAGAAGCCCCACCAGTGCCCCGTGTGCCCGAAGAGCTTCAGGATACAGGACTCCTTGCAGATCCATATGAACACCCACACTGGGGCGAGGCCGTTCAAGTGCCCCCACTGCCCCAAGGCATTCAAGTCTCGGACGCAGAACCACAAGCATCAACTGGTCCACACTAAGGTCCGCCGCTACCGCTGCGACCTCTGCGACAAGACATTCCAGACGTCCACATGCGTGAAGACCCACATCAAAACAGTCCACATGAAGATCCCCCTGCCCCCCCGCATCAGACACCGGACCCCCCGCTTAGACCCCCCCACTGACCCCCCGCACAATATGTACATGCATAATATTAATATGAAGTTGGATGGCAGTAATGATTGA
- Protein Sequence
- MVVCAVKLCRNYTGKNIKPPEGISFHRFPTDLDQKQEWIQAIRREPDWVPGTHCRVCSVHFENSDFKISETGRRILHKDAVPTKNLYQEERSETQYSVKKRILKKRRLTRSKGSATRPDPASDEVQACRACLATDTRLYNVHDCDLVQTLSDLTGCLVSPTDGFPQQICSVCYTLLQKYAEFRARCTTSQVLLEDARSAEHMITTEVVNGIDRALHRLNLPLTIKRQPIIDLTEINIKQEHLDLLLEEDSNIDSSHIIDDAYDIFDEKDEQKLDDFKTENDEVVNDVAHDRIDSIYADVIPKNEIFIAVDAKRILEKESSSKKRKSELKRKSKKLKKEENLKVLKKNSKEDIRNTKARKTEEDYDNFAKMYSVDITFLTREEQIAEVEARKESDNYKNSRFKCDECFKGFTGEGAFKNHKAKHDPSIGAYACEPCGFRFPKRYKMLHHLTHHKMNFVCRLCGHLTKLPSKAKEHFKWHNGVKYPCHFCEKSFIKRTSQFNHMRNRHGSACCDICQEIFSGQRGLSAHMIKAHKEAVRSRCESCGVQFHSEAALGRHVDTAPDNLCQPGTKACAQCGENFLSEEQLNEHSKENHWKEIKCEKCNANFENEKLYRMHRIVHKEFRERRPRSEPKVKGAKVSRAKSKKVPKIQKRMCEMCGLTWRSSAALKYHQRVHTGEKPHQCPVCPKSFRIQDSLQIHMNTHTGARPFKCPHCPKAFKSRTQNHKHQLVHTKVRRYRCDLCDKTFQTSTCVKTHIKTVHMKIPLPPRIRHRTPRLDPPTDPPHNMYMHNINMKLDGSND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994678;
- 90% Identity
- iTF_00674355;
- 80% Identity
- iTF_00674355;