Basic Information

Insect: Esperia sulphurella
Gene Symbol: Sall1
Assembly: GCA_947086405.1
Location: OX352277.1:5533603-5543902[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.003 0.22 12.5 2.2 2 23 73 94 72 94 0.96

2 12 0.05 3.6 8.7 2.5 3 23 102 123 100 123 0.94

3 12 0.2 15 6.7 0.2 2 23 131 153 130 153 0.93

4 12 1.5e-05 0.0011 19.7 1.8 1 20 159 178 159 180 0.94

5 12 2.4e-07 1.7e-05 25.4 1.5 1 23 187 209 187 209 0.96

6 12 0.019 1.4 10.0 2.2 1 20 215 234 215 236 0.93

7 12 0.055 4 8.5 1.7 3 19 258 274 257 279 0.92

8 12 2.5e-05 0.0019 19.0 1.8 1 23 577 599 577 599 0.97

9 12 0.00049 0.036 15.0 3.7 1 23 606 629 606 629 0.92

10 12 0.12 8.9 7.4 0.1 3 23 639 660 638 660 0.95

11 12 0.87 64 4.7 4.5 1 23 666 690 666 690 0.95

12 12 9.8e-06 0.00072 20.3 0.7 1 21 696 716 696 717 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.003	0.22	12.5	2.2	2	23	73	94	72	94	0.96
2	12	0.05	3.6	8.7	2.5	3	23	102	123	100	123	0.94
3	12	0.2	15	6.7	0.2	2	23	131	153	130	153	0.93
4	12	1.5e-05	0.0011	19.7	1.8	1	20	159	178	159	180	0.94
5	12	2.4e-07	1.7e-05	25.4	1.5	1	23	187	209	187	209	0.96
6	12	0.019	1.4	10.0	2.2	1	20	215	234	215	236	0.93
7	12	0.055	4	8.5	1.7	3	19	258	274	257	279	0.92
8	12	2.5e-05	0.0019	19.0	1.8	1	23	577	599	577	599	0.97
9	12	0.00049	0.036	15.0	3.7	1	23	606	629	606	629	0.92
10	12	0.12	8.9	7.4	0.1	3	23	639	660	638	660	0.95
11	12	0.87	64	4.7	4.5	1	23	666	690	666	690	0.95
12	12	9.8e-06	0.00072	20.3	0.7	1	21	696	716	696	717	0.96

Sequence Information

Coding Sequence: ATGGAATCGAATTTATCATTCTTCAGTCTTCCATTCGTAGATTCCGAGGCGTCCGAGTTGTTTAGCAAGAGCAAATCTCAGGAATGTGTGTACGACGAGCTTCAGGGGGCTTTGCCCCCCCACGGATCGCTACTTGGGGCGGACGAGGACTTCGCCCAGTTCCTGTCAGCTGACGGGCCGCTGGAGGAGCCCGATCTGAACGGACCGACTACCTTGCACTGTGAGATCTGTAAGAAAAAGTTCGATAACGCTAAGAAGTACTACGGACATCTGAGAGTGCATTCGAAGGATAATCTTTGGATATGTGACAAATGCCCAAACCACAAATTCTCTACCAAGCAACAGCTGATGAAGCACAGTCTCACTCACAAGCCTCTGGAGAAGATGTGGAGATGTCCACAGTGCACCATGGCTTTTGAAGCTCTCTGGAGACTCCAACAGCATCTATTTTCTAAGCATTTGGATTACAGGCCGCACAAATGTGATCAGTGTGAGAAGTCTTTTACAAAACCATCCGATTTGAAGAAGCACAAAGGAACATACAGTGGTGTAAAGAAGCATGCATGCTCAGTGTGTGAAGTGTCTTTCAGTGACAAGTCCAACCTAAAGCGCCACATGCTCACACACAACAATGAGAAACCATTCTGCTGTCCTAGCTGTGGGAACAGGTTCAAACAGTTGGCATCTATGAAGCGACATAGCAAAAATTGCACATCAGTCAAGAATCAAATTGATAATGCAATTGTAGATAGTACCAGTAGGAAGAATTACTGCAGGGTGTGTGGTATGACTTTCCAATACAAAAGTTCGTTGCTAGAGCATTGTGTGAGGCAACACACTGGTGGAACAAATGAAACAACAGAGAAAGTTGACAAAACAAACCATGTAAACGTAGATGTGAATCGAACAGTAGACAACATTGTAGATGACATACTGTCCGCTGAAGACGATTATATGACAATGTCCACACAAAATGAAATACTTAATGTATTTAACAACCAAAATAATACACAAAATAACACAGATAATCTAATGCAAATAGAATTTTTAAAGGACATCAATCAGCTGCACACATTAGACGATGAATTGTTCTACAATGACATAGACTTTGATAGTTTTCAAACCAGTCACATCTTCAACACAAATGAAATAAATTATGCTGGTGATAGAAACGAAAATTTTGATTTTACTGAGTGTGGTAGAAATATAGATCAGGATATCATGAACGCATTGTATCATGTGAAAGCCGAACATTTGCCTGATGAATTACTACATGTTAATGAAGTTAATCCTGTAGCAATAAAAACTGATCAGGTTCTACAAAACCCTACAGTTTCAGTCAATGAATGCGCTACTATATTCGAAAGTGACGTCGATTTAGAAGCCAGTACAAGTTTGGCTGCTAATCTAAATCAGTTAATCGGTGAGAATAGTGTTCAATACATTTCCACGGAGGATGATGATACGTTTATTATAAGTCTGAAAAGTGAAATAGACGCAGAACAATTGACTGACATGTTGAACATTGGAGTAGAATTCGTTACTGATGATAATAATGAGAATGCAGAAGAGTTTGCGTCAGAGGTGGATACGACAGAGCCTAGCATTGAAGTAGAGCCAATTGTATTAAAAATTGAGCCAAGTAAAAAAGCAATTATTAAAGAGAATGGCGAATCTGAACAAAAAGATAACCAAGTCGTAAAAATAAAAAATAAGAAGCAAGTTCTTTATGTTTGTCGAAAGTGTAAGAAAGTTTTCAACAAGAAAGACAATTTTAGGTCACATGTAGCAATACATGACGAGTCTCTGCGACGGCACAAGTGCCGGGTTTGCGGCGCGAGGTTCAGCTACCGCTCCACGCTGAACAAGCACCATGCGGCGCGCCACGAGCCGCGCGTGCTGCCCTCCGTCGCGTGCCGCATATGCGACAAGCGCTACGCCGCGCTCTGGATGGTTAAGAACCACATAGAACGGGATCACGAAAAGCTGCAACCTTATGCGTGTGATAGGAAAGACTGCAGACAGAAGTTTTACAAGAAATGTGATCTGGATGTGCATAAAAGGTTCCATAAAAGCGAGCGGCCTTACATTTGTGATATCTGCAATCGTGGATTTTCTCATGTTTCTCATTTGAGGAGGCACGTGCGCGGCGTGGACTGCACTAAATAG
Protein Sequence: MESNLSFFSLPFVDSEASELFSKSKSQECVYDELQGALPPHGSLLGADEDFAQFLSADGPLEEPDLNGPTTLHCEICKKKFDNAKKYYGHLRVHSKDNLWICDKCPNHKFSTKQQLMKHSLTHKPLEKMWRCPQCTMAFEALWRLQQHLFSKHLDYRPHKCDQCEKSFTKPSDLKKHKGTYSGVKKHACSVCEVSFSDKSNLKRHMLTHNNEKPFCCPSCGNRFKQLASMKRHSKNCTSVKNQIDNAIVDSTSRKNYCRVCGMTFQYKSSLLEHCVRQHTGGTNETTEKVDKTNHVNVDVNRTVDNIVDDILSAEDDYMTMSTQNEILNVFNNQNNTQNNTDNLMQIEFLKDINQLHTLDDELFYNDIDFDSFQTSHIFNTNEINYAGDRNENFDFTECGRNIDQDIMNALYHVKAEHLPDELLHVNEVNPVAIKTDQVLQNPTVSVNECATIFESDVDLEASTSLAANLNQLIGENSVQYISTEDDDTFIISLKSEIDAEQLTDMLNIGVEFVTDDNNENAEEFASEVDTTEPSIEVEPIVLKIEPSKKAIIKENGESEQKDNQVVKIKNKKQVLYVCRKCKKVFNKKDNFRSHVAIHDESLRRHKCRVCGARFSYRSTLNKHHAARHEPRVLPSVACRICDKRYAALWMVKNHIERDHEKLQPYACDRKDCRQKFYKKCDLDVHKRFHKSERPYICDICNRGFSHVSHLRRHVRGVDCTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00994616;
90% Identity: iTF_00994616;
80% Identity: -