Esul002823.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352268.1:4758400-4769191[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.7e-06 0.00012 22.7 2.1 2 23 258 279 257 279 0.97 2 11 0.0003 0.022 15.6 7.3 1 23 285 308 285 308 0.96 3 11 0.0029 0.22 12.5 0.9 1 23 321 343 321 343 0.96 4 11 0.00012 0.0085 16.9 2.5 1 23 350 372 350 372 0.99 5 11 0.28 21 6.3 6.8 1 23 378 400 378 400 0.98 6 11 0.001 0.075 14.0 1.5 1 23 406 429 406 429 0.97 7 11 0.22 16 6.6 1.3 2 23 435 454 434 454 0.91 8 11 5.9e-06 0.00043 21.0 1.5 1 23 460 482 460 482 0.97 9 11 1.6e-05 0.0011 19.7 0.9 1 23 488 510 488 510 0.98 10 11 0.00033 0.024 15.5 0.8 1 23 516 539 516 539 0.96 11 11 0.00084 0.061 14.2 0.4 1 22 545 566 545 566 0.95
Sequence Information
- Coding Sequence
- ATGGTTAATATAGCATTGAAAAATGCACCCAAACGTGCTTCTACTAAGAAAAAAGGTGTTGGTAAATCCTATAAAGGCACAAGTATTGTAACTAGAGGTACTAATATTACAATTAAAAAGCCTACAGATTTGGAGCAACCATCAGACAAAACTGTCTCAGAAAATGGTCCACTACTGGCCATAACTAGAAGTGGACGAATTAAAAAGAACAAAGACGGACTTAAACTCATGGACATGGATCATATACTAAAAAGTGAACTGTTGATTGAAGATAAAACTAAGAAAACCAAAGCTAAGGTAATAGCCAATGGAGTTAATAATAATAATCATATTGGAATAAGTGACCGAAATAAAAAGTCCAAAGTTACGAAAGATGTTGATGAAGACAATATAATTTCTACAGCCAATAATAGATGCAAACCTAATAAAATATGTTCAAAAGTAAATGCGAAAAATAAACCAAAAAACAAACCTTCAGAAGCCATGGAGCCCTGTTTACGAGAAGAAGTTATAAATAAAATGAAGAGTGTATTGTCGCCTGACAATGAATTCAGTCCTGAAACTGATTTGAAAACACAACGGTTTGTTAGGAGTAGACCTAGGACTTCTTCTATTGTTGCTAAGAAGGCGTCAAAAGTGAAAAGAAACCTGAAGAATGGTGTAAAGAAACGCAAATTAGAGGCAACAGCTGTTGAGAAAGCAGACTTGAGGGCAGCAAAAATGAAACAGGTTACTTTAAGTAATGGGGTTGTATTGACATTGGCATTAGTCAAGTGTGATTTCTGCCAGAAATCCTTTAGTAATAAACAGTCTTTAAGCCGACATATGTTAATGCACATTGATTTAAGACCTCACATGTGTCCCCATTGCCCAAGGAAATTCCGTTACCATTCCACACTGAAAATACATTTGCAACGACGTCACCCAGGCATTCAGGAAGTCCGCAAAGTTCCCGAGTACCACATGTGCCATATCTGTGACAAGGCATTCTTGATGGAAGAGAACCTGGAACTACACTTGGCCAGTCATGTCAAAACTGAGAATAACTTCAAATGTCTGTACTGTGATAAGAAATTTTCATATCGACTGCTCTTAGTACAGCATGAGAAAACACATTTGACCACAAACAAATTCAAATGCTACATGTGTGAAATGAGCTATGATTGCCGAAGTAAGTTAACTCATCACATCAAAAGCCACAAGAAAGTTAAAGACTATATCTGCCAGTATTGTGGCAAGGAGTTTCTGAGATTGAGTGGGATTAAACGGCATGTTAGAATATGTCATGGTGGGCAAAGAATTCAGTGTCCAATTTGTATGAAAAAGTTAAAAGGACATTTAACTGAACATATGAGAGTGCATGAGCAGAAACGTCCACATGTTTGCGATGAGTGTGGACAGCGATTCATCCAGTCTACACAGTTGACTGTCCACAAAAGATCCCATACTGGTGACAGACCATATCCTTGTAAGATATGTAAACGTCCTTTTGGTCATTCTAATGCCTTAATGCTGCATATAAGAAGGCATACTGGAGAAAAACCGTTTGCCTGTGCAATGTGCCCAATGACATTCTCCCAACTGCCTCATATGAAGACTCATATGAGTAAGATTCATGGTAAAGAACATGCATATAAATGTCAAAAATGTGAAGAGTTCTTCAAATTAAAAATTAATCTCGAAGCCCATGCAAAAACTTGTACTGTTGGAGATAAAGAGCTGTCTTTCGAAGAAAAGATTCAAGCATCTGTTCAAGTTGAGGAAGTGGAGGTTGAGTCCTCTATGAGCTTGTCTAAGATGAGGTTCCTGCTGGCTCTGCTCCTCACCAAGATTGCCTCCAAAGACAAACTCAAATACTTAGGGTTCAACAAACGTCTCATAGACGAGCTTCTGGAGGAATCCCTGTATGCAATGGGACACACCCCATGCAAGGATGATTCTCTATCACCATATAAACGACTGAAGGCCAACATAGAGGTACTACTGACCGGCACAGTTCCGAAATCTCAAATAGAGAAGTTCAGGTATGAAAATAAGTCTACGGAAGAGATAATGGTGCTTCTAACTGGAGAGTAA
- Protein Sequence
- MVNIALKNAPKRASTKKKGVGKSYKGTSIVTRGTNITIKKPTDLEQPSDKTVSENGPLLAITRSGRIKKNKDGLKLMDMDHILKSELLIEDKTKKTKAKVIANGVNNNNHIGISDRNKKSKVTKDVDEDNIISTANNRCKPNKICSKVNAKNKPKNKPSEAMEPCLREEVINKMKSVLSPDNEFSPETDLKTQRFVRSRPRTSSIVAKKASKVKRNLKNGVKKRKLEATAVEKADLRAAKMKQVTLSNGVVLTLALVKCDFCQKSFSNKQSLSRHMLMHIDLRPHMCPHCPRKFRYHSTLKIHLQRRHPGIQEVRKVPEYHMCHICDKAFLMEENLELHLASHVKTENNFKCLYCDKKFSYRLLLVQHEKTHLTTNKFKCYMCEMSYDCRSKLTHHIKSHKKVKDYICQYCGKEFLRLSGIKRHVRICHGGQRIQCPICMKKLKGHLTEHMRVHEQKRPHVCDECGQRFIQSTQLTVHKRSHTGDRPYPCKICKRPFGHSNALMLHIRRHTGEKPFACAMCPMTFSQLPHMKTHMSKIHGKEHAYKCQKCEEFFKLKINLEAHAKTCTVGDKELSFEEKIQASVQVEEVEVESSMSLSKMRFLLALLLTKIASKDKLKYLGFNKRLIDELLEESLYAMGHTPCKDDSLSPYKRLKANIEVLLTGTVPKSQIEKFRYENKSTEEIMVLLTGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -