Esul012511.1
Basic Information
- Insect
- Esperia sulphurella
- Gene Symbol
- -
- Assembly
- GCA_947086405.1
- Location
- OX352284.1:5373648-5382405[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.00062 0.045 14.6 0.3 1 23 77 100 77 100 0.97 2 20 2.5 1.8e+02 3.3 0.1 2 23 127 149 126 149 0.91 3 20 0.0053 0.39 11.7 3.3 1 23 171 193 171 193 0.97 4 20 5.5e-05 0.0041 17.9 0.8 1 23 197 219 197 219 0.98 5 20 2.9 2.1e+02 3.1 0.1 1 23 340 362 340 362 0.91 6 20 0.055 4 8.5 0.3 3 23 388 409 386 409 0.91 7 20 0.015 1.1 10.3 0.1 2 23 434 455 433 455 0.97 8 20 0.00015 0.011 16.6 4.2 1 23 459 481 459 481 0.97 9 20 0.0075 0.55 11.2 0.3 1 23 486 509 486 509 0.92 10 20 3.2 2.3e+02 3.0 0.6 2 23 516 538 516 538 0.94 11 20 0.00011 0.0084 17.0 0.8 1 23 578 600 578 600 0.96 12 20 0.0049 0.36 11.8 0.0 2 23 624 646 623 646 0.96 13 20 0.00063 0.046 14.6 1.4 1 23 668 690 668 690 0.97 14 20 0.00014 0.01 16.7 0.4 3 23 696 716 695 716 0.97 15 20 0.0049 0.36 11.8 1.7 1 23 724 746 724 746 0.98 16 20 0.053 3.9 8.6 3.3 1 23 755 778 755 778 0.97 17 20 0.22 16 6.6 6.4 1 23 784 807 784 807 0.96 18 20 3.8e-05 0.0028 18.4 0.2 1 23 813 835 813 835 0.96 19 20 7.2e-07 5.2e-05 23.9 0.5 1 23 841 863 841 863 0.99 20 20 0.012 0.88 10.6 6.8 1 23 869 891 869 892 0.95
Sequence Information
- Coding Sequence
- ATGGCCGTAGGTTCCGCTATAGCGGACGCGGAGGGAAATGTAGGAGTTAGACGCGTTAGGAAGTTAAAGGATAACGTTAGCGCCCGACAGATGCGCAGGCGACGCCGCGCGAACAACGAACTGCCCGAGGAGTCCGAGAAACGCATATCAAAAACTATGATGCGAAGGAACGCTATGACCATTCTAGAATGCTCCACAGCTTGGGCGTTCAGATGGTTTCACAGTGCCTTTTACTGCTCCTACTGTGATACTAAATTCGTCGATGTTGCCCCTCTTCGTGAACATGTCAGATCCAATCACTTGAATGAAACCCCAACCAAAAAAATATTTGCTAAGCTTACTGAAAATAATATGGTCAAAATAGACATAGCTGAACTGAAATGTAGAATTTGCAATTTGCTTCTAGATGGTATAGATAATTTGAAATCGCATCTAGTAATGGTGCACGGTAAAGTTTTGTACCAAGACTACAGCGACGGAGTTCTTTCTTTTAAATTGGATCAGACCGGATTCTTTTGTCAAAAGTGCTTTGCAAATTTCTCGACTTTCTCCAAAATGAACGAGCACATGAACACTCATTACCAGAACTATATTTGTGACTCGTGCGGAAAGGCATTCGTGTCTAAATCTCGGTTTCGGACTCACGTGCAGTCTCATGAGATAGGTAGTTTTCCTTGCGAACCGGAGGTCACAGAGAGCGAAGATACCACAGGGAAATCAGTTCGAATAAAGTGGAAGCGGCTTCGCAGACTTGTGGAAGATAAAGCCAATGCGGCGTTTATATTAGAACATTCGAACGCAGTAGCATTTAGATGGTTCCGTGGACTGAAAGTCACGGAGTGCGAAGATATCGCAGAGAAATCGATTCAGATAAAGTGGAAGCGACAGCTATTGGAAGATTCCGCTGAGAAATCTATTCAAATAAAATGGAAGCGACGACTTGTTGAAGATAAAGCTAACGCAGCTTTTATACTAGAGCATTCGAATGCAGTAGCGTTTAGATGGTTCCGTGGTAGATTTATGTGCGCATACTGCCCTGCAGTCTGCGCAAGCGTCATTGAAGTACGCGAACATACAACGGAACACGTAGAGCGTAACGTTTTCAAATATCCAGATGCCCGCAACACGCTTCCACTGCGAGTAGACATAACAGACTTGGCTTGTACTGTCTGCAGTAAGAGAGTTTACACTGTAAAGGATTTGAAAAGCCATCTATCTGACGAACATGCCAGAAGCATAGATCCTGATGACAACTACGGTGATGGGATAGTACCTTACGTTTTAACAGGAAAAGAATTAAAATGTGTACTTTGCGGGATACTGTTTGAAAGTTTCATGTCGCTAATTTTGCATATGAACAGTCATTATCAAGGGTTTATCTGTCACACATGCGGGAAAGGCTTTTCTGGGAAGCACAAGCTTCGTATACACCGCTTGAGTCATGAGACTGGTGAATTTTCGTGTCCAAAATGCGAATTAGTATTTCCAAATCGCAAGGCGAGGATTAGGCACGTCACTCTCACCCATGAACCAAAAGGGAGAAACCGTTGTCCTATCTGCGCTGATCGTTTCGACTCATACCACGCGAGATTGAGACATCTAGAGAGAGTGCATGGGCCCGTCTTTGTCACGAAATGGGTACCAAGGCGCAAGTACGGCGATCAACGGGACAATGCGGTTATTATTTTTCAGTGCTCCAACGTGTGTCCGTTCAGATGGAAACACGGGGCTTACACGTGCGCGCACTGTCCCAAGAAGTTTGGTGATTTCGCACAACTCAAAGAGCATATGGTGGAACACCCTAACAAAGTCGAAGTGATGCGCAACGCCCGCCCTCTTTACACAATCAAAGTGGACATATCTGACCTTAGATGCAATATTTGTCGTAAATCTCTAGATGACATAGACGCTCTCGCAAACCATTTGATTACTGTGCATAATAAACCGATCATCAAAGACTATGAAATGGGCGTTACGCCTTTTCTATTGGACTCAAATAAGTTTGTCTGCGTACAGTGCAAAAAGCGATTCGAGCTTTTCACTAATTTAAACAGTCATATGAACGAACATAACCCTAACAACATATGCTTCCAGTGCGGCAAATCTTTTACAGTAGTATCGAGGCTCAAGGCTCACCTGAAAATCCACGAAGCTGCCAGCAACGGAGAGTACAATTGCAGCAAATGCTACAAGAATTTTGCCTCAAAAATCCTAAGACAAGAGCACTTAATGACACATTCTTCACAACGGAGAGAATTAAAATACAAGTGTCCTTTCTGTAACGAATACTTCAAAGCTTATCACGAGAGAATGAAACATTTGGAGACTTCGCATGGCAAGAAAGTGGAATACGCTTGCCACATATGTCCGGCGAAGTTCGCCTTGTTTCATCATAGGACTAGACATATCAGGCACGTCCATATCCAAAATAAGGAATTTGCCTGTGAACTTTGTCCTTATCAATTTGTGACGGCAGTAcagttgaaacggcatatggtgagacatgggggagaaagaaaatttcagtgtgaagtctgtaaaaaggcttacgcgagaccaaaaactttaaaagaacatatgcgtattcataataatgataaacgtttcgcttgcgagtattgtaattatgcgtgcgtacagaaatgcagtctgaagagtcatgtcaaaagtcatcatccAAATGCTGAACCTTTGAACAATGTTTTATAA
- Protein Sequence
- MAVGSAIADAEGNVGVRRVRKLKDNVSARQMRRRRRANNELPEESEKRISKTMMRRNAMTILECSTAWAFRWFHSAFYCSYCDTKFVDVAPLREHVRSNHLNETPTKKIFAKLTENNMVKIDIAELKCRICNLLLDGIDNLKSHLVMVHGKVLYQDYSDGVLSFKLDQTGFFCQKCFANFSTFSKMNEHMNTHYQNYICDSCGKAFVSKSRFRTHVQSHEIGSFPCEPEVTESEDTTGKSVRIKWKRLRRLVEDKANAAFILEHSNAVAFRWFRGLKVTECEDIAEKSIQIKWKRQLLEDSAEKSIQIKWKRRLVEDKANAAFILEHSNAVAFRWFRGRFMCAYCPAVCASVIEVREHTTEHVERNVFKYPDARNTLPLRVDITDLACTVCSKRVYTVKDLKSHLSDEHARSIDPDDNYGDGIVPYVLTGKELKCVLCGILFESFMSLILHMNSHYQGFICHTCGKGFSGKHKLRIHRLSHETGEFSCPKCELVFPNRKARIRHVTLTHEPKGRNRCPICADRFDSYHARLRHLERVHGPVFVTKWVPRRKYGDQRDNAVIIFQCSNVCPFRWKHGAYTCAHCPKKFGDFAQLKEHMVEHPNKVEVMRNARPLYTIKVDISDLRCNICRKSLDDIDALANHLITVHNKPIIKDYEMGVTPFLLDSNKFVCVQCKKRFELFTNLNSHMNEHNPNNICFQCGKSFTVVSRLKAHLKIHEAASNGEYNCSKCYKNFASKILRQEHLMTHSSQRRELKYKCPFCNEYFKAYHERMKHLETSHGKKVEYACHICPAKFALFHHRTRHIRHVHIQNKEFACELCPYQFVTAVQLKRHMVRHGGERKFQCEVCKKAYARPKTLKEHMRIHNNDKRFACEYCNYACVQKCSLKSHVKSHHPNAEPLNNVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -